RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 UNQ5815/PRO19632Q6UWF5 114 aa25.67■■□□□ 1.7
SSSCA1-205ENST00000527920 SHOXO15266 292 aa25.66■■□□□ 1.7
SSSCA1-205ENST00000527920 TUSC2O75896 110 aa25.66■■□□□ 1.7
SSSCA1-205ENST00000527920 OR8U8P0C7N1 319 aa25.66■■□□□ 1.7
SSSCA1-205ENST00000527920 NFYAP23511 347 aaPredicted RBP25.66■■□□□ 1.7
SSSCA1-205ENST00000527920 FAM103A1Q9BTL3 118 aaKnown RBP25.66■■□□□ 1.7
SSSCA1-205ENST00000527920 AUNIPQ9H7T9 357 aa25.66■■□□□ 1.7
SSSCA1-205ENST00000527920 SSBP2P81877 361 aaPredicted RBP25.65■■□□□ 1.7
SSSCA1-205ENST00000527920 ZNF616Q08AN1 781 aa25.65■■□□□ 1.7
SSSCA1-205ENST00000527920 LFNGQ8NES3 379 aa25.65■■□□□ 1.7
SSSCA1-205ENST00000527920 OSR1Q8TAX0 266 aaPredicted RBP25.65■■□□□ 1.7
SSSCA1-205ENST00000527920 SLA2Q9H6Q3 261 aa25.65■■□□□ 1.7
SSSCA1-205ENST00000527920 SRRM4A7MD48 611 aaKnown RBP25.64■■□□□ 1.7
SSSCA1-205ENST00000527920 LINC00473A8K010 186 aa25.64■■□□□ 1.7
SSSCA1-205ENST00000527920 K7EIL1 84 aa25.64■■□□□ 1.7
SSSCA1-205ENST00000527920 ARPC1BO15143 372 aaKnown RBP25.64■■□□□ 1.7
SSSCA1-205ENST00000527920 CD40LGP29965 261 aa25.64■■□□□ 1.7
SSSCA1-205ENST00000527920 RPS19P39019 145 aaKnown RBP25.64■■□□□ 1.7
SSSCA1-205ENST00000527920 HOGA1Q86XE5 327 aa25.64■■□□□ 1.7
SSSCA1-205ENST00000527920 BEST4Q8NFU0 473 aa25.64■■□□□ 1.7
SSSCA1-205ENST00000527920 OR1N2Q8NGR9 330 aa25.64■■□□□ 1.7
SSSCA1-205ENST00000527920 TGFBR1P36897 503 aa25.63■■□□□ 1.69
SSSCA1-205ENST00000527920 UBE2KP61086 200 aa25.63■■□□□ 1.69
SSSCA1-205ENST00000527920 GNB1P62873 340 aa25.63■■□□□ 1.69
SSSCA1-205ENST00000527920 C9orf66Q5T8R8 295 aa25.63■■□□□ 1.69
SSSCA1-205ENST00000527920 TEX45Q8NA69 505 aa25.63■■□□□ 1.69
SSSCA1-205ENST00000527920 GRPEL2Q8TAA5 225 aa25.63■■□□□ 1.69
SSSCA1-205ENST00000527920 TMEM68Q96MH6 324 aa25.63■■□□□ 1.69
SSSCA1-205ENST00000527920 RBMX2Q9Y388 322 aaKnown RBP25.63■■□□□ 1.69
SSSCA1-205ENST00000527920 IGKV1D-13A0A0B4J2D9 117 aa25.62■■□□□ 1.69
SSSCA1-205ENST00000527920 H3BUA1 57 aa25.62■■□□□ 1.69
SSSCA1-205ENST00000527920 IGLV2-14P01704 120 aa25.62■■□□□ 1.69
SSSCA1-205ENST00000527920 IGKV1-13P0DP09 117 aa25.62■■□□□ 1.69
SSSCA1-205ENST00000527920 CBX5P45973 191 aa25.62■■□□□ 1.69
SSSCA1-205ENST00000527920 VMA21Q3ZAQ7 101 aa25.62■■□□□ 1.69
SSSCA1-205ENST00000527920 ASPHD1Q5U4P2 390 aa25.62■■□□□ 1.69
SSSCA1-205ENST00000527920 OVCH2Q7RTZ1 564 aa25.62■■□□□ 1.69
SSSCA1-205ENST00000527920 XRCC3O43542 346 aa25.61■■□□□ 1.69
SSSCA1-205ENST00000527920 CNIH1O95406 144 aa25.61■■□□□ 1.69
SSSCA1-205ENST00000527920 CRYZL1O95825 349 aa25.61■■□□□ 1.69
SSSCA1-205ENST00000527920 LGALS1P09382 135 aaKnown RBP25.61■■□□□ 1.69
SSSCA1-205ENST00000527920 ARPC4P59998 168 aa25.61■■□□□ 1.69
SSSCA1-205ENST00000527920 PJVKQ0ZLH3 352 aa25.61■■□□□ 1.69
SSSCA1-205ENST00000527920 OR5B12Q96R08 314 aa25.61■■□□□ 1.69
SSSCA1-205ENST00000527920 PRELID3BQ9Y3B1 194 aa25.61■■□□□ 1.69
SSSCA1-205ENST00000527920 WI2-2373I1.2A0A1W2PRP0 233 aa25.6■■□□□ 1.69
SSSCA1-205ENST00000527920 MSMO1Q15800 293 aa25.6■■□□□ 1.69
SSSCA1-205ENST00000527920 UBE2NLQ5JXB2 153 aa25.6■■□□□ 1.69
SSSCA1-205ENST00000527920 KCTD9Q7L273 389 aa25.6■■□□□ 1.69
SSSCA1-205ENST00000527920 S100A16Q96FQ6 103 aaKnown RBP25.6■■□□□ 1.69
SSSCA1-205ENST00000527920 HSD17B10Q99714 261 aaKnown RBP25.6■■□□□ 1.69
SSSCA1-205ENST00000527920 J3QRK9 145 aa25.59■■□□□ 1.69
SSSCA1-205ENST00000527920 RAMP3O60896 148 aa25.59■■□□□ 1.69
SSSCA1-205ENST00000527920 LSM3P62310 102 aaKnown RBP25.59■■□□□ 1.69
SSSCA1-205ENST00000527920 DGCR2P98153 550 aa25.59■■□□□ 1.69
SSSCA1-205ENST00000527920 MRGPRG-AS1Q2M3A8 158 aa25.59■■□□□ 1.69
SSSCA1-205ENST00000527920 GVQW1Q8N7I0 195 aa25.59■■□□□ 1.69
SSSCA1-205ENST00000527920 CASTOR1Q8WTX7 329 aa25.59■■□□□ 1.69
SSSCA1-205ENST00000527920 SLC25A46Q96AG3 418 aa25.59■■□□□ 1.69
SSSCA1-205ENST00000527920 KCTD12Q96CX2 325 aaKnown RBP25.59■■□□□ 1.69
SSSCA1-205ENST00000527920 MRPS7Q9Y2R9 242 aaKnown RBP25.59■■□□□ 1.69
SSSCA1-205ENST00000527920 SEC14L6B5MCN3 397 aa25.58■■□□□ 1.69
SSSCA1-205ENST00000527920 BRI3O95415 125 aa25.58■■□□□ 1.69
SSSCA1-205ENST00000527920 EIF4EBP1Q13541 118 aaPredicted RBP25.58■■□□□ 1.69
SSSCA1-205ENST00000527920 POC5Q8NA72 575 aa25.58■■□□□ 1.69
SSSCA1-205ENST00000527920 INSL3P51460 131 aa25.57■■□□□ 1.68
SSSCA1-205ENST00000527920 TPPP2P59282 170 aa25.57■■□□□ 1.68
SSSCA1-205ENST00000527920 PRSS8Q16651 343 aa25.57■■□□□ 1.68
SSSCA1-205ENST00000527920 RHOVQ96L33 236 aa25.57■■□□□ 1.68
SSSCA1-205ENST00000527920 FUNDC2Q9BWH2 189 aa25.57■■□□□ 1.68
SSSCA1-205ENST00000527920 CREBL2O60519 120 aaPredicted RBP25.56■■□□□ 1.68
SSSCA1-205ENST00000527920 FCGR3BO75015 233 aa25.56■■□□□ 1.68
SSSCA1-205ENST00000527920 RPL30P62888 115 aaKnown RBP25.56■■□□□ 1.68
SSSCA1-205ENST00000527920 DCTN2Q13561 401 aaKnown RBP25.56■■□□□ 1.68
SSSCA1-205ENST00000527920 ZNF66Q6ZN08 573 aa25.56■■□□□ 1.68
SSSCA1-205ENST00000527920 SAMD12Q8N8I0 201 aa25.56■■□□□ 1.68
SSSCA1-205ENST00000527920 OR13F1Q8NGS4 319 aa25.56■■□□□ 1.68
SSSCA1-205ENST00000527920 LINC01619G3V211 115 aa25.55■■□□□ 1.68
SSSCA1-205ENST00000527920 SNAPC3Q92966 411 aa25.55■■□□□ 1.68
SSSCA1-205ENST00000527920 MS4A10Q96PG2 267 aa25.55■■□□□ 1.68
SSSCA1-205ENST00000527920 ALX4Q9H161 411 aaPredicted RBP25.55■■□□□ 1.68
SSSCA1-205ENST00000527920 SCOCQ9UIL1 159 aa25.55■■□□□ 1.68
SSSCA1-205ENST00000527920 TRGV3P03979 118 aa25.54■■□□□ 1.68
SSSCA1-205ENST00000527920 FCGR2CP31995 323 aa25.54■■□□□ 1.68
SSSCA1-205ENST00000527920 CDK10Q15131 360 aa25.54■■□□□ 1.68
SSSCA1-205ENST00000527920 OR5AP2Q8NGF4 316 aa25.54■■□□□ 1.68
SSSCA1-205ENST00000527920 OR4S2Q8NH73 311 aa25.54■■□□□ 1.68
SSSCA1-205ENST00000527920 SAA1P0DJI8 122 aaPredicted RBP25.53■■□□□ 1.68
SSSCA1-205ENST00000527920 PTHLHP12272 177 aa25.53■■□□□ 1.68
SSSCA1-205ENST00000527920 AADACP22760 399 aa25.53■■□□□ 1.68
SSSCA1-205ENST00000527920 ZBTB34Q8NCN2 500 aa25.53■■□□□ 1.68
SSSCA1-205ENST00000527920 ANAPC10Q9UM13 185 aa25.53■■□□□ 1.68
SSSCA1-205ENST00000527920 PPYP01298 95 aa25.52■■□□□ 1.68
SSSCA1-205ENST00000527920 HSPB1P04792 205 aaKnown RBP25.52■■□□□ 1.68
SSSCA1-205ENST00000527920 TMEM69Q5SWH9 247 aa25.52■■□□□ 1.68
SSSCA1-205ENST00000527920 IDO2Q6ZQW0 420 aa25.52■■□□□ 1.68
SSSCA1-205ENST00000527920 TCTEX1D2Q8WW35 142 aa25.52■■□□□ 1.68
SSSCA1-205ENST00000527920 TNCP24821 2201 aa25.52■■□□□ 1.68
SSSCA1-205ENST00000527920 A0A0G2JLM5 398 aa25.51■■□□□ 1.67
SSSCA1-205ENST00000527920 OVOL1O14753 267 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms