RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 C4orf36Q96KX1 117 aa9.77□□□□□ -0.85
SSRP1-203ENST00000526696 CHRDL1Q9BU40 450 aa9.77□□□□□ -0.85
SSRP1-203ENST00000526696 KRTAP3-3Q9BYR6 98 aa9.77□□□□□ -0.85
SSRP1-203ENST00000526696 KRTAP3-2Q9BYR7 98 aa9.77□□□□□ -0.85
SSRP1-203ENST00000526696 S100A14Q9HCY8 104 aa9.77□□□□□ -0.85
SSRP1-203ENST00000526696 EXOGQ9Y2C4 368 aaKnown RBP9.77□□□□□ -0.85
SSRP1-203ENST00000526696 ORC6Q9Y5N6 252 aa9.77□□□□□ -0.85
SSRP1-203ENST00000526696 UBE2QL1A1L167 161 aa9.76□□□□□ -0.85
SSRP1-203ENST00000526696 TSPAN4O14817 238 aa9.76□□□□□ -0.85
SSRP1-203ENST00000526696 ZNF585BQ52M93 769 aa9.76□□□□□ -0.85
SSRP1-203ENST00000526696 SIGIRRQ6IA17 410 aa9.76□□□□□ -0.85
SSRP1-203ENST00000526696 C19orf35Q6ZS72 473 aa9.76□□□□□ -0.85
SSRP1-203ENST00000526696 ZNF554Q86TJ5 538 aa9.76□□□□□ -0.85
SSRP1-203ENST00000526696 NECAP1Q8NC96 275 aa9.76□□□□□ -0.85
SSRP1-203ENST00000526696 GALMQ96C23 342 aa9.76□□□□□ -0.85
SSRP1-203ENST00000526696 PHB2Q99623 299 aa9.76□□□□□ -0.85
SSRP1-203ENST00000526696 TAS2R4Q9NYW5 299 aa9.76□□□□□ -0.85
SSRP1-203ENST00000526696 KCNIP1Q9NZI2 227 aa9.76□□□□□ -0.85
SSRP1-203ENST00000526696 GMPPBQ9Y5P6 360 aa9.76□□□□□ -0.85
SSRP1-203ENST00000526696 PEX16Q9Y5Y5 336 aa9.76□□□□□ -0.85
SSRP1-203ENST00000526696 S4R3C0 116 aa9.76□□□□□ -0.85
SSRP1-203ENST00000526696 SRRM4A7MD48 611 aaKnown RBP9.75□□□□□ -0.85
SSRP1-203ENST00000526696 J3QLW9 94 aa9.75□□□□□ -0.85
SSRP1-203ENST00000526696 ALPLP05186 524 aa9.75□□□□□ -0.85
SSRP1-203ENST00000526696 ZNF19P17023 458 aa9.75□□□□□ -0.85
SSRP1-203ENST00000526696 ARL3P36405 182 aa9.75□□□□□ -0.85
SSRP1-203ENST00000526696 MED22Q15528 200 aa9.75□□□□□ -0.85
SSRP1-203ENST00000526696 HMGN3Q15651 99 aa9.75□□□□□ -0.85
SSRP1-203ENST00000526696 SLC22A6Q4U2R8 563 aa9.75□□□□□ -0.85
SSRP1-203ENST00000526696 CLEC19AQ6UXS0 136 aa9.75□□□□□ -0.85
SSRP1-203ENST00000526696 PDPNQ86YL7 162 aa9.75□□□□□ -0.85
SSRP1-203ENST00000526696 OR5AK2Q8NH90 309 aa9.75□□□□□ -0.85
SSRP1-203ENST00000526696 C18orf15Q96N68 181 aa9.75□□□□□ -0.85
SSRP1-203ENST00000526696 C5orf66Q9H5L9 145 aa9.75□□□□□ -0.85
SSRP1-203ENST00000526696 SPACA1Q9HBV2 294 aa9.75□□□□□ -0.85
SSRP1-203ENST00000526696 EXOSC1Q9Y3B2 195 aaKnown RBP9.75□□□□□ -0.85
SSRP1-203ENST00000526696 IGHV4-28A0A0C4DH34 117 aa9.74□□□□□ -0.85
SSRP1-203ENST00000526696 CA11O75493 328 aa9.74□□□□□ -0.85
SSRP1-203ENST00000526696 GPX5O75715 221 aa9.74□□□□□ -0.85
SSRP1-203ENST00000526696 GTF2F2P13984 249 aa9.74□□□□□ -0.85
SSRP1-203ENST00000526696 ADMP35318 185 aa9.74□□□□□ -0.85
SSRP1-203ENST00000526696 MED21Q13503 144 aa9.74□□□□□ -0.85
SSRP1-203ENST00000526696 RCN1Q15293 331 aa9.74□□□□□ -0.85
SSRP1-203ENST00000526696 FAM106AQ4KMX7 169 aa9.74□□□□□ -0.85
SSRP1-203ENST00000526696 SETD9Q8NE22 299 aa9.74□□□□□ -0.85
SSRP1-203ENST00000526696 OR14A2Q96R54 314 aa9.74□□□□□ -0.85
SSRP1-203ENST00000526696 JAM3Q9BX67 310 aa9.74□□□□□ -0.85
SSRP1-203ENST00000526696 ISG20L2Q9H9L3 353 aaKnown RBP9.74□□□□□ -0.85
SSRP1-203ENST00000526696 PAK1IP1Q9NWT1 392 aaPredicted RBP9.74□□□□□ -0.85
SSRP1-203ENST00000526696 RPL36Q9Y3U8 105 aaKnown RBP9.74□□□□□ -0.85
SSRP1-203ENST00000526696 ELOA3CA0A087WX78 387 aaPredicted RBP9.73□□□□□ -0.85
SSRP1-203ENST00000526696 BAG2O95816 211 aa9.73□□□□□ -0.85
SSRP1-203ENST00000526696 IFNA10P01566 189 aa9.73□□□□□ -0.85
SSRP1-203ENST00000526696 CD2P06729 351 aa9.73□□□□□ -0.85
SSRP1-203ENST00000526696 MAP2K4P45985 399 aa9.73□□□□□ -0.85
SSRP1-203ENST00000526696 FAM209BQ5JX69 171 aa9.73□□□□□ -0.85
SSRP1-203ENST00000526696 OR4A47Q6IF82 309 aa9.73□□□□□ -0.85
SSRP1-203ENST00000526696 ZNF767PQ75MW2 155 aa9.73□□□□□ -0.85
SSRP1-203ENST00000526696 IL1F10Q8WWZ1 152 aa9.73□□□□□ -0.85
SSRP1-203ENST00000526696 PYDC1Q8WXC3 89 aa9.73□□□□□ -0.85
SSRP1-203ENST00000526696 SRSF12Q8WXF0 261 aaKnown RBP9.73□□□□□ -0.85
SSRP1-203ENST00000526696 LGALS12Q96DT0 336 aa9.73□□□□□ -0.85
SSRP1-203ENST00000526696 Q96MT0 163 aa9.73□□□□□ -0.85
SSRP1-203ENST00000526696 PDCD1LG2Q9BQ51 273 aa9.73□□□□□ -0.85
SSRP1-203ENST00000526696 NDUFAF3Q9BU61 184 aa9.73□□□□□ -0.85
SSRP1-203ENST00000526696 C11orf54Q9H0W9 315 aaPredicted RBP9.73□□□□□ -0.85
SSRP1-203ENST00000526696 MRPL27Q9P0M9 148 aaKnown RBP9.73□□□□□ -0.85
SSRP1-203ENST00000526696 STEAP1Q9UHE8 339 aa9.73□□□□□ -0.85
SSRP1-203ENST00000526696 CELA1Q9UNI1 258 aa9.73□□□□□ -0.85
SSRP1-203ENST00000526696 DEFB131BA0A096LNP1 70 aa9.72□□□□□ -0.85
SSRP1-203ENST00000526696 SAC3D1A6NKF1 404 aa9.72□□□□□ -0.85
SSRP1-203ENST00000526696 CASQ2O14958 399 aaPredicted RBP9.72□□□□□ -0.85
SSRP1-203ENST00000526696 MPPED1O15442 326 aa9.72□□□□□ -0.85
SSRP1-203ENST00000526696 ZNF780AO75290 641 aaPredicted RBP9.72□□□□□ -0.85
SSRP1-203ENST00000526696 ZNF93P35789 620 aaPredicted RBP9.72□□□□□ -0.85
SSRP1-203ENST00000526696 GBX2P52951 348 aaPredicted RBP9.72□□□□□ -0.85
SSRP1-203ENST00000526696 TNXAQ16473 311 aa9.72□□□□□ -0.85
SSRP1-203ENST00000526696 CCDC58Q4VC31 144 aa9.72□□□□□ -0.85
SSRP1-203ENST00000526696 DDI2Q5TDH0 399 aa9.72□□□□□ -0.85
SSRP1-203ENST00000526696 SPATA12Q7Z6I5 190 aa9.72□□□□□ -0.85
SSRP1-203ENST00000526696 LHFPL3Q86UP9 236 aa9.72□□□□□ -0.85
SSRP1-203ENST00000526696 TTC9CQ8N5M4 171 aa9.72□□□□□ -0.85
SSRP1-203ENST00000526696 MARC2Q969Z3 335 aa9.72□□□□□ -0.85
SSRP1-203ENST00000526696 ERVK13-1Q9NX77 482 aa9.72□□□□□ -0.85
SSRP1-203ENST00000526696 E9PI62 339 aa9.71□□□□□ -0.86
SSRP1-203ENST00000526696 EI24O14681 340 aa9.71□□□□□ -0.86
SSRP1-203ENST00000526696 ITGB1BP1O14713 200 aa9.71□□□□□ -0.86
SSRP1-203ENST00000526696 CA1P00915 261 aaPredicted RBP9.71□□□□□ -0.86
SSRP1-203ENST00000526696 GABRB1P18505 474 aa9.71□□□□□ -0.86
SSRP1-203ENST00000526696 SOX2P48431 317 aa9.71□□□□□ -0.86
SSRP1-203ENST00000526696 TMEM187Q14656 261 aa9.71□□□□□ -0.86
SSRP1-203ENST00000526696 PRSS8Q16651 343 aa9.71□□□□□ -0.86
SSRP1-203ENST00000526696 C12orf74Q32Q52 190 aa9.71□□□□□ -0.86
SSRP1-203ENST00000526696 C10orf55Q5SWW7 151 aa9.71□□□□□ -0.86
SSRP1-203ENST00000526696 IDO2Q6ZQW0 420 aa9.71□□□□□ -0.86
SSRP1-203ENST00000526696 PQLC1Q8N2U9 271 aa9.71□□□□□ -0.86
SSRP1-203ENST00000526696 OR13C5Q8NGS8 318 aa9.71□□□□□ -0.86
SSRP1-203ENST00000526696 GPR148Q8TDV2 347 aa9.71□□□□□ -0.86
SSRP1-203ENST00000526696 ORAI1Q96D31 301 aa9.71□□□□□ -0.86
SSRP1-203ENST00000526696 HARBI1Q96MB7 349 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms