RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 OR2D2Q9H210 308 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 VCXQ9H320 206 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 LINC00574Q9H8X3 128 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 CISHQ9NSE2 258 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 ZNF586Q9NXT0 402 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 ANAPC11Q9NYG5 84 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 RPUSD1Q9UJJ7 312 aaKnown RBP3.08□□□□□ -1.92
USP47-206ENST00000525367 UFC1Q9Y3C8 167 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 MTUS2Q5JR59 1369 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 CAMSAP1Q5T5Y3 1602 aa3.08□□□□□ -1.92
USP47-206ENST00000525367 TRAV26-2A0A0B4J265 109 aa3.07□□□□□ -1.92
USP47-206ENST00000525367 IGKV1-12A0A0C4DH73 117 aa3.07□□□□□ -1.92
USP47-206ENST00000525367 EXOC1LA0A1B0GW35 172 aa3.07□□□□□ -1.92
USP47-206ENST00000525367 A6NED7 52 aa3.07□□□□□ -1.92
USP47-206ENST00000525367 IGKV1D-12P01611 117 aa3.07□□□□□ -1.92
USP47-206ENST00000525367 IGLV7-43P04211 117 aa3.07□□□□□ -1.92
USP47-206ENST00000525367 SERPINE1P05121 402 aa3.07□□□□□ -1.92
USP47-206ENST00000525367 CBR1P16152 277 aa3.07□□□□□ -1.92
USP47-206ENST00000525367 SERPINB1P30740 379 aa3.07□□□□□ -1.92
USP47-206ENST00000525367 APOFQ13790 326 aa3.07□□□□□ -1.92
USP47-206ENST00000525367 GRK1Q15835 563 aa3.07□□□□□ -1.92
USP47-206ENST00000525367 GLT8D1Q68CQ7 371 aa3.07□□□□□ -1.92
USP47-206ENST00000525367 TMPPEQ6ZT21 453 aa3.07□□□□□ -1.92
USP47-206ENST00000525367 STX19Q8N4C7 294 aa3.07□□□□□ -1.92
USP47-206ENST00000525367 OR11H6Q8NGC7 330 aa3.07□□□□□ -1.92
USP47-206ENST00000525367 RAB2BQ8WUD1 216 aa3.07□□□□□ -1.92
USP47-206ENST00000525367 ACOT12Q8WYK0 555 aa3.07□□□□□ -1.92
USP47-206ENST00000525367 OR5P3Q8WZ94 311 aa3.07□□□□□ -1.92
USP47-206ENST00000525367 HIST1H2BAQ96A08 127 aa3.07□□□□□ -1.92
USP47-206ENST00000525367 RNASE7Q9H1E1 156 aaKnown RBP3.07□□□□□ -1.92
USP47-206ENST00000525367 UQCC1Q9NVA1 299 aa3.07□□□□□ -1.92
USP47-206ENST00000525367 TAAR3PQ9P1P4 343 aa3.07□□□□□ -1.92
USP47-206ENST00000525367 COQ4Q9Y3A0 265 aa3.07□□□□□ -1.92
USP47-206ENST00000525367 LOC105371267A0A1B0GV96 52 aa3.06□□□□□ -1.92
USP47-206ENST00000525367 C7orf66A4D0T2 115 aa3.06□□□□□ -1.92
USP47-206ENST00000525367 RTL1A6NKG5 1358 aa3.06□□□□□ -1.92
USP47-206ENST00000525367 ZNF729A6NN14 1252 aaPredicted RBP3.06□□□□□ -1.92
USP47-206ENST00000525367 PIRO00625 290 aa3.06□□□□□ -1.92
USP47-206ENST00000525367 COX7A2LO14548 114 aa3.06□□□□□ -1.92
USP47-206ENST00000525367 CHD2O14647 1828 aaKnown RBP3.06□□□□□ -1.92
USP47-206ENST00000525367 TRGV3P03979 118 aa3.06□□□□□ -1.92
USP47-206ENST00000525367 PFN1P07737 140 aaKnown RBP3.06□□□□□ -1.92
USP47-206ENST00000525367 CYBAP13498 195 aa3.06□□□□□ -1.92
USP47-206ENST00000525367 IDO1P14902 403 aa3.06□□□□□ -1.92
USP47-206ENST00000525367 CRABP2P29373 138 aa3.06□□□□□ -1.92
USP47-206ENST00000525367 RAB4BP61018 213 aa3.06□□□□□ -1.92
USP47-206ENST00000525367 TNFAIP6P98066 277 aaPredicted RBP3.06□□□□□ -1.92
USP47-206ENST00000525367 DHX57Q6P158 1386 aaKnown RBP3.06□□□□□ -1.92
USP47-206ENST00000525367 TBPL2Q6SJ96 375 aa3.06□□□□□ -1.92
USP47-206ENST00000525367 SMIM20Q8N5G0 67 aa3.06□□□□□ -1.92
USP47-206ENST00000525367 APCDD1LQ8NCL9 501 aa3.06□□□□□ -1.92
USP47-206ENST00000525367 OR10A6Q8NH74 314 aa3.06□□□□□ -1.92
USP47-206ENST00000525367 NMNAT3Q96T66 252 aa3.06□□□□□ -1.92
USP47-206ENST00000525367 CCDC90BQ9GZT6 254 aa3.06□□□□□ -1.92
USP47-206ENST00000525367 ICOSQ9Y6W8 199 aa3.06□□□□□ -1.92
USP47-206ENST00000525367 LRP4O75096 1905 aa3.05□□□□□ -1.92
USP47-206ENST00000525367 A0A1B0GW54 56 aa3.05□□□□□ -1.92
USP47-206ENST00000525367 VPS37CA5D8V6 355 aaPredicted RBP3.05□□□□□ -1.92
USP47-206ENST00000525367 A8MWP4 228 aa3.05□□□□□ -1.92
USP47-206ENST00000525367 SH2D1AO60880 128 aa3.05□□□□□ -1.92
USP47-206ENST00000525367 S1PR2O95136 353 aa3.05□□□□□ -1.92
USP47-206ENST00000525367 IFNA14P01570 189 aa3.05□□□□□ -1.92
USP47-206ENST00000525367 IGKV1D-33P01593 117 aa3.05□□□□□ -1.92
USP47-206ENST00000525367 IGKV1-33P01594 117 aa3.05□□□□□ -1.92
USP47-206ENST00000525367 CRHP06850 196 aa3.05□□□□□ -1.92
USP47-206ENST00000525367 CGB3P0DN86 165 aa3.05□□□□□ -1.92
USP47-206ENST00000525367 CGB7P0DN87 165 aa3.05□□□□□ -1.92
USP47-206ENST00000525367 AKR1C8PQ5T2L2 129 aa3.05□□□□□ -1.92
USP47-206ENST00000525367 AMTNQ6UX39 209 aa3.05□□□□□ -1.92
USP47-206ENST00000525367 GOLT1AQ6ZVE7 132 aa3.05□□□□□ -1.92
USP47-206ENST00000525367 SH2D6Q7Z4S9 175 aa3.05□□□□□ -1.92
USP47-206ENST00000525367 C3orf22Q8N5N4 141 aa3.05□□□□□ -1.92
USP47-206ENST00000525367 KLK6Q92876 244 aa3.05□□□□□ -1.92
USP47-206ENST00000525367 TSPAN32Q96QS1 320 aa3.05□□□□□ -1.92
USP47-206ENST00000525367 GINS3Q9BRX5 216 aa3.05□□□□□ -1.92
USP47-206ENST00000525367 NUP155O75694 1391 aa3.04□□□□□ -1.92
USP47-206ENST00000525367 IGLV3-16A0A075B6K0 115 aa3.04□□□□□ -1.92
USP47-206ENST00000525367 TRBV24-1A0A075B6N3 115 aa3.04□□□□□ -1.92
USP47-206ENST00000525367 OR11H12B2RN74 326 aa3.04□□□□□ -1.92
USP47-206ENST00000525367 HMGB3O15347 200 aaKnown RBP3.04□□□□□ -1.92
USP47-206ENST00000525367 SLC25A20O43772 301 aa3.04□□□□□ -1.92
USP47-206ENST00000525367 C8GP07360 202 aa3.04□□□□□ -1.92
USP47-206ENST00000525367 ZNF705DP0CH99 300 aaPredicted RBP3.04□□□□□ -1.92
USP47-206ENST00000525367 ERP29P30040 261 aaKnown RBP3.04□□□□□ -1.92
USP47-206ENST00000525367 ZNF140P52738 457 aaPredicted RBP3.04□□□□□ -1.92
USP47-206ENST00000525367 RPS20P60866 119 aaKnown RBP3.04□□□□□ -1.92
USP47-206ENST00000525367 OR8G1Q15617 311 aa3.04□□□□□ -1.92
USP47-206ENST00000525367 GRINAQ7Z429 371 aa3.04□□□□□ -1.92
USP47-206ENST00000525367 LYZL2Q7Z4W2 148 aa3.04□□□□□ -1.92
USP47-206ENST00000525367 BPIFB6Q8NFQ5 453 aa3.04□□□□□ -1.92
USP47-206ENST00000525367 OR11H1Q8NG94 326 aa3.04□□□□□ -1.92
USP47-206ENST00000525367 OR11H2Q8NH07 326 aa3.04□□□□□ -1.92
USP47-206ENST00000525367 OR4K13Q8NH42 304 aa3.04□□□□□ -1.92
USP47-206ENST00000525367 GPER1Q99527 375 aa3.04□□□□□ -1.92
USP47-206ENST00000525367 SLC23A2Q9UGH3 650 aa3.04□□□□□ -1.92
USP47-206ENST00000525367 OR51B4Q9Y5P0 310 aa3.04□□□□□ -1.92
USP47-206ENST00000525367 TMEM56-RWDD3S4R434 201 aa3.04□□□□□ -1.92
USP47-206ENST00000525367 ARHGAP21Q5T5U3 1957 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 FHAD1B1AJZ9 1412 aa3.03□□□□□ -1.92
USP47-206ENST00000525367 hCG_1818297A0A087WSY0 165 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms