RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 BMPR1BO00238 502 aa18.12■□□□□ 0.49
USP47-205ENST00000525257 FABP7O15540 132 aa18.12■□□□□ 0.49
USP47-205ENST00000525257 CDK1P06493 297 aa18.12■□□□□ 0.49
USP47-205ENST00000525257 SERPINB10P48595 397 aa18.12■□□□□ 0.49
USP47-205ENST00000525257 CLDN12P56749 244 aa18.12■□□□□ 0.49
USP47-205ENST00000525257 EXOSC2Q13868 293 aaKnown RBP18.12■□□□□ 0.49
USP47-205ENST00000525257 SPHARQ15513 63 aa18.12■□□□□ 0.49
USP47-205ENST00000525257 RAB11BQ15907 218 aa18.12■□□□□ 0.49
USP47-205ENST00000525257 TNXAQ16473 311 aa18.12■□□□□ 0.49
USP47-205ENST00000525257 RTL8BQ17RB0 113 aa18.12■□□□□ 0.49
USP47-205ENST00000525257 CD300EQ496F6 205 aaPredicted RBP18.12■□□□□ 0.49
USP47-205ENST00000525257 IGSF11Q5DX21 431 aa18.12■□□□□ 0.49
USP47-205ENST00000525257 TMEM203Q969S6 136 aa18.12■□□□□ 0.49
USP47-205ENST00000525257 WFDC10AQ9H1F0 79 aa18.12■□□□□ 0.49
USP47-205ENST00000525257 AKIP1Q9NQ31 210 aa18.12■□□□□ 0.49
USP47-205ENST00000525257 LSM2Q9Y333 95 aaKnown RBP18.12■□□□□ 0.49
USP47-205ENST00000525257 MPPED1O15442 326 aa18.11■□□□□ 0.49
USP47-205ENST00000525257 PRH1P02810 166 aa18.11■□□□□ 0.49
USP47-205ENST00000525257 CD7P09564 240 aa18.11■□□□□ 0.49
USP47-205ENST00000525257 OR9G9P0C7N8 305 aa18.11■□□□□ 0.49
USP47-205ENST00000525257 RHOGP84095 191 aa18.11■□□□□ 0.49
USP47-205ENST00000525257 MED22Q15528 200 aa18.11■□□□□ 0.49
USP47-205ENST00000525257 LIPKQ5VXJ0 399 aa18.11■□□□□ 0.49
USP47-205ENST00000525257 IDO2Q6ZQW0 420 aa18.11■□□□□ 0.49
USP47-205ENST00000525257 DEFB125Q8N687 156 aa18.11■□□□□ 0.49
USP47-205ENST00000525257 OR56B1Q8NGI3 324 aa18.11■□□□□ 0.49
USP47-205ENST00000525257 SLC2A8Q9NY64 477 aa18.11■□□□□ 0.49
USP47-205ENST00000525257 AIREO43918 545 aa18.1■□□□□ 0.49
USP47-205ENST00000525257 TAGLNQ01995 201 aaKnown RBP18.1■□□□□ 0.49
USP47-205ENST00000525257 PRSS8Q16651 343 aa18.1■□□□□ 0.49
USP47-205ENST00000525257 VMA21Q3ZAQ7 101 aa18.1■□□□□ 0.49
USP47-205ENST00000525257 RNLSQ5VYX0 342 aa18.1■□□□□ 0.49
USP47-205ENST00000525257 OR10J5Q8NHC4 309 aa18.1■□□□□ 0.49
USP47-205ENST00000525257 SRSF12Q8WXF0 261 aaKnown RBP18.1■□□□□ 0.49
USP47-205ENST00000525257 ACOT12Q8WYK0 555 aa18.1■□□□□ 0.49
USP47-205ENST00000525257 CABLES2Q9BTV7 478 aa18.1■□□□□ 0.49
USP47-205ENST00000525257 ZNF230Q9UIE0 474 aaPredicted RBP18.1■□□□□ 0.49
USP47-205ENST00000525257 RBMY1BA6NDE4 496 aaKnown RBP18.09■□□□□ 0.49
USP47-205ENST00000525257 RBMY1EA6NEQ0 496 aaKnown RBP18.09■□□□□ 0.49
USP47-205ENST00000525257 PTGES3LE9PB15 166 aa18.09■□□□□ 0.49
USP47-205ENST00000525257 RBMY1DP0C7P1 496 aaKnown RBP18.09■□□□□ 0.49
USP47-205ENST00000525257 GSTT2P0CG29 244 aa18.09■□□□□ 0.49
USP47-205ENST00000525257 GSTT2BP0CG30 244 aa18.09■□□□□ 0.49
USP47-205ENST00000525257 MRPS15P82914 257 aaKnown RBP18.09■□□□□ 0.49
USP47-205ENST00000525257 LAX1Q8IWV1 398 aa18.09■□□□□ 0.49
USP47-205ENST00000525257 DYNLRB2Q8TF09 96 aa18.09■□□□□ 0.49
USP47-205ENST00000525257 UFD1Q92890 307 aa18.09■□□□□ 0.49
USP47-205ENST00000525257 SRD5A3Q9H8P0 318 aa18.09■□□□□ 0.49
USP47-205ENST00000525257 TRBV6-7A0A0A0MS04 114 aa18.08■□□□□ 0.48
USP47-205ENST00000525257 FAM223BA6NKX1 122 aa18.08■□□□□ 0.48
USP47-205ENST00000525257 ZNF785A8K8V0 405 aa18.08■□□□□ 0.48
USP47-205ENST00000525257 CRYZL1O95825 349 aa18.08■□□□□ 0.48
USP47-205ENST00000525257 FCGR3AP08637 254 aa18.08■□□□□ 0.48
USP47-205ENST00000525257 RRASP10301 218 aa18.08■□□□□ 0.48
USP47-205ENST00000525257 UBE2KP61086 200 aa18.08■□□□□ 0.48
USP47-205ENST00000525257 ZNF45Q02386 682 aa18.08■□□□□ 0.48
USP47-205ENST00000525257 ATP5G2Q06055 141 aa18.08■□□□□ 0.48
USP47-205ENST00000525257 PLA2G7Q13093 441 aa18.08■□□□□ 0.48
USP47-205ENST00000525257 TMEM91Q6ZNR0 172 aa18.08■□□□□ 0.48
USP47-205ENST00000525257 FAM223AQ8IWN6 122 aa18.08■□□□□ 0.48
USP47-205ENST00000525257 TEX45Q8NA69 505 aa18.08■□□□□ 0.48
USP47-205ENST00000525257 MAFIPQ8WZ33 124 aa18.08■□□□□ 0.48
USP47-205ENST00000525257 FAM3DQ96BQ1 224 aa18.08■□□□□ 0.48
USP47-205ENST00000525257 RBM7Q9Y580 266 aaKnown RBP18.08■□□□□ 0.48
USP47-205ENST00000525257 DENRO43583 198 aaKnown RBP18.07■□□□□ 0.48
USP47-205ENST00000525257 TUSC2O75896 110 aa18.07■□□□□ 0.48
USP47-205ENST00000525257 EDN2P20800 178 aa18.07■□□□□ 0.48
USP47-205ENST00000525257 RPS25P62851 125 aaKnown RBP18.07■□□□□ 0.48
USP47-205ENST00000525257 RCN1Q15293 331 aa18.07■□□□□ 0.48
USP47-205ENST00000525257 GUCA2BQ16661 112 aa18.07■□□□□ 0.48
USP47-205ENST00000525257 C2orf76Q3KRA6 126 aa18.07■□□□□ 0.48
USP47-205ENST00000525257 KCNK7Q9Y2U2 307 aa18.07■□□□□ 0.48
USP47-205ENST00000525257 OR11H12B2RN74 326 aa18.06■□□□□ 0.48
USP47-205ENST00000525257 DDB2Q92466 427 aa18.06■□□□□ 0.48
USP47-205ENST00000525257 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP18.05■□□□□ 0.48
USP47-205ENST00000525257 TRBV9A0A0B4J1U6 114 aa18.05■□□□□ 0.48
USP47-205ENST00000525257 TMEM272A0A1B0GTI8 110 aa18.05■□□□□ 0.48
USP47-205ENST00000525257 LINC00473A8K010 186 aa18.05■□□□□ 0.48
USP47-205ENST00000525257 PPP5D1E7EU14 171 aa18.05■□□□□ 0.48
USP47-205ENST00000525257 ARL6IP5O75915 188 aa18.05■□□□□ 0.48
USP47-205ENST00000525257 DUTP33316 252 aaKnown RBP18.05■□□□□ 0.48
USP47-205ENST00000525257 DEFB114Q30KQ6 69 aa18.05■□□□□ 0.48
USP47-205ENST00000525257 RAB3CQ96E17 227 aa18.05■□□□□ 0.48
USP47-205ENST00000525257 GINS4Q9BRT9 223 aa18.05■□□□□ 0.48
USP47-205ENST00000525257 ZNF430Q9H8G1 570 aaPredicted RBP18.05■□□□□ 0.48
USP47-205ENST00000525257 HSMCR30P0CW71 290 aa18.04■□□□□ 0.48
USP47-205ENST00000525257 CALRP27797 417 aaKnown RBP18.04■□□□□ 0.48
USP47-205ENST00000525257 TPBGQ13641 420 aa18.04■□□□□ 0.48
USP47-205ENST00000525257 C10orf55Q5SWW7 151 aa18.04■□□□□ 0.48
USP47-205ENST00000525257 HES5Q5TA89 166 aa18.04■□□□□ 0.48
USP47-205ENST00000525257 WDR89Q96FK6 387 aaPredicted RBP18.04■□□□□ 0.48
USP47-205ENST00000525257 ADTRPQ96IZ2 230 aa18.04■□□□□ 0.48
USP47-205ENST00000525257 SELENOKQ9Y6D0 94 aa18.04■□□□□ 0.48
USP47-205ENST00000525257 A0A075B6Q4 140 aa18.03■□□□□ 0.48
USP47-205ENST00000525257 C2orf70A6NJV1 201 aa18.03■□□□□ 0.48
USP47-205ENST00000525257 OR2J3O76001 311 aa18.03■□□□□ 0.48
USP47-205ENST00000525257 ACTL6BO94805 426 aa18.03■□□□□ 0.48
USP47-205ENST00000525257 HLA-AP01891 365 aaKnown RBP18.03■□□□□ 0.48
USP47-205ENST00000525257 SAA1P0DJI8 122 aaPredicted RBP18.03■□□□□ 0.48
USP47-205ENST00000525257 FOLR2P14207 255 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms