RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 ATP6V0E1O15342 81 aa9.36□□□□□ -0.91
CLN8-207ENST00000524258 SLC25A17O43808 307 aa9.36□□□□□ -0.91
CLN8-207ENST00000524258 PEX14O75381 377 aa9.36□□□□□ -0.91
CLN8-207ENST00000524258 IGHG4P01861 327 aa9.36□□□□□ -0.91
CLN8-207ENST00000524258 RRASP10301 218 aa9.36□□□□□ -0.91
CLN8-207ENST00000524258 TNFSF8P32971 234 aa9.36□□□□□ -0.91
CLN8-207ENST00000524258 TAS2R46P59540 309 aa9.36□□□□□ -0.91
CLN8-207ENST00000524258 DGCR2P98153 550 aa9.36□□□□□ -0.91
CLN8-207ENST00000524258 C2orf68Q2NKX9 166 aa9.36□□□□□ -0.91
CLN8-207ENST00000524258 VAX1Q5SQQ9 334 aa9.36□□□□□ -0.91
CLN8-207ENST00000524258 FOXB2Q5VYV0 432 aa9.36□□□□□ -0.91
CLN8-207ENST00000524258 ZNF562Q6V9R5 426 aa9.36□□□□□ -0.91
CLN8-207ENST00000524258 ZNF818PQ6ZRF7 136 aa9.36□□□□□ -0.91
CLN8-207ENST00000524258 C18orf65Q6ZTR6 163 aa9.36□□□□□ -0.91
CLN8-207ENST00000524258 FOXRED2Q8IWF2 684 aa9.36□□□□□ -0.91
CLN8-207ENST00000524258 OR5H2Q8NGV7 314 aa9.36□□□□□ -0.91
CLN8-207ENST00000524258 MYOZ3Q8TDC0 251 aa9.36□□□□□ -0.91
CLN8-207ENST00000524258 SECTM1Q8WVN6 248 aa9.36□□□□□ -0.91
CLN8-207ENST00000524258 TSNAXQ99598 290 aaKnown RBP9.36□□□□□ -0.91
CLN8-207ENST00000524258 SLC5A7Q9GZV3 580 aa9.36□□□□□ -0.91
CLN8-207ENST00000524258 FXYD6Q9H0Q3 95 aa9.36□□□□□ -0.91
CLN8-207ENST00000524258 METTL1Q9UBP6 276 aaKnown RBP9.36□□□□□ -0.91
CLN8-207ENST00000524258 RSL24D1Q9UHA3 163 aaKnown RBP9.36□□□□□ -0.91
CLN8-207ENST00000524258 GABARAPH6UMI1 98 aa9.35□□□□□ -0.91
CLN8-207ENST00000524258 CTDSPLO15194 276 aa9.35□□□□□ -0.91
CLN8-207ENST00000524258 RGS5O15539 181 aa9.35□□□□□ -0.91
CLN8-207ENST00000524258 SOX15O60248 233 aa9.35□□□□□ -0.91
CLN8-207ENST00000524258 CRYZL1O95825 349 aa9.35□□□□□ -0.91
CLN8-207ENST00000524258 IGLV1-40P01703 118 aa9.35□□□□□ -0.91
CLN8-207ENST00000524258 CD74P04233 296 aa9.35□□□□□ -0.91
CLN8-207ENST00000524258 CSF1P09603 554 aa9.35□□□□□ -0.91
CLN8-207ENST00000524258 PSMB8P28062 276 aa9.35□□□□□ -0.91
CLN8-207ENST00000524258 NSUN5P1Q3KNT7 163 aa9.35□□□□□ -0.91
CLN8-207ENST00000524258 AADACL3Q5VUY0 350 aa9.35□□□□□ -0.91
CLN8-207ENST00000524258 ZNF66Q6ZN08 573 aa9.35□□□□□ -0.91
CLN8-207ENST00000524258 LCNL1Q6ZST4 164 aa9.35□□□□□ -0.91
CLN8-207ENST00000524258 LHFPL1Q86WI0 220 aa9.35□□□□□ -0.91
CLN8-207ENST00000524258 ZBTB34Q8NCN2 500 aa9.35□□□□□ -0.91
CLN8-207ENST00000524258 SMIM4Q8WVI0 70 aa9.35□□□□□ -0.91
CLN8-207ENST00000524258 HSD17B10Q99714 261 aaKnown RBP9.35□□□□□ -0.91
CLN8-207ENST00000524258 ZNF2Q9BSG1 426 aaPredicted RBP9.35□□□□□ -0.91
CLN8-207ENST00000524258 MMP27Q9H306 513 aa9.35□□□□□ -0.91
CLN8-207ENST00000524258 TAS2R8Q9NYW2 309 aa9.35□□□□□ -0.91
CLN8-207ENST00000524258 KIAA1456Q9P272 454 aa9.35□□□□□ -0.91
CLN8-207ENST00000524258 TSSC4Q9Y5U2 329 aaPredicted RBP9.35□□□□□ -0.91
CLN8-207ENST00000524258 WSB1Q9Y6I7 421 aa9.35□□□□□ -0.91
CLN8-207ENST00000524258 A3GALT2U3KPV4 340 aa9.35□□□□□ -0.91
CLN8-207ENST00000524258 TCRBV4S1A1TA0A5B7 111 aa9.34□□□□□ -0.91
CLN8-207ENST00000524258 M0QYG6 137 aa9.34□□□□□ -0.91
CLN8-207ENST00000524258 FCGR3BO75015 233 aa9.34□□□□□ -0.91
CLN8-207ENST00000524258 CA2P00918 260 aa9.34□□□□□ -0.91
CLN8-207ENST00000524258 CD3DP04234 171 aa9.34□□□□□ -0.91
CLN8-207ENST00000524258 IL6RP08887 468 aaPredicted RBP9.34□□□□□ -0.91
CLN8-207ENST00000524258 ZNF735P0CB33 412 aa9.34□□□□□ -0.91
CLN8-207ENST00000524258 FXYD4P59646 89 aa9.34□□□□□ -0.91
CLN8-207ENST00000524258 UBE2KP61086 200 aa9.34□□□□□ -0.91
CLN8-207ENST00000524258 RPL23AP62750 156 aaKnown RBP9.34□□□□□ -0.91
CLN8-207ENST00000524258 FOXE3Q13461 319 aa9.34□□□□□ -0.91
CLN8-207ENST00000524258 RTL8BQ17RB0 113 aa9.34□□□□□ -0.91
CLN8-207ENST00000524258 RNASE12Q5GAN4 147 aaKnown RBP9.34□□□□□ -0.91
CLN8-207ENST00000524258 ASPHD1Q5U4P2 390 aa9.34□□□□□ -0.91
CLN8-207ENST00000524258 PYHIN1Q6K0P9 492 aa9.34□□□□□ -0.91
CLN8-207ENST00000524258 ETV3LQ6ZN32 361 aa9.34□□□□□ -0.91
CLN8-207ENST00000524258 KCTD9Q7L273 389 aa9.34□□□□□ -0.91
CLN8-207ENST00000524258 PPP1R27Q86WC6 154 aa9.34□□□□□ -0.91
CLN8-207ENST00000524258 COMMD1Q8N668 190 aa9.34□□□□□ -0.91
CLN8-207ENST00000524258 TEX45Q8NA69 505 aa9.34□□□□□ -0.91
CLN8-207ENST00000524258 OR4X2Q8NGF9 303 aa9.34□□□□□ -0.91
CLN8-207ENST00000524258 OR4D10Q8NGI6 311 aa9.34□□□□□ -0.91
CLN8-207ENST00000524258 MCFD2Q8NI22 146 aa9.34□□□□□ -0.91
CLN8-207ENST00000524258 OSR1Q8TAX0 266 aaPredicted RBP9.34□□□□□ -0.91
CLN8-207ENST00000524258 FAM110DQ8TAY7 271 aaPredicted RBP9.34□□□□□ -0.91
CLN8-207ENST00000524258 C15orf40Q8WUR7 153 aa9.34□□□□□ -0.91
CLN8-207ENST00000524258 MRGPRFQ96AM1 343 aa9.34□□□□□ -0.91
CLN8-207ENST00000524258 DIRAS2Q96HU8 199 aa9.34□□□□□ -0.91
CLN8-207ENST00000524258 HARBI1Q96MB7 349 aa9.34□□□□□ -0.91
CLN8-207ENST00000524258 CLCC1Q96S66 551 aa9.34□□□□□ -0.91
CLN8-207ENST00000524258 TINAGL1Q9GZM7 467 aaPredicted RBP9.34□□□□□ -0.91
CLN8-207ENST00000524258 KLK15Q9H2R5 256 aa9.34□□□□□ -0.91
CLN8-207ENST00000524258 DPPA5A6NC42 116 aa9.33□□□□□ -0.92
CLN8-207ENST00000524258 SHOXO15266 292 aa9.33□□□□□ -0.92
CLN8-207ENST00000524258 RBFOX2O43251 390 aaKnown RBP eCLIP9.33□□□□□ -0.92
CLN8-207ENST00000524258 TNFSF12O43508 249 aa9.33□□□□□ -0.92
CLN8-207ENST00000524258 GSTZ1O43708 216 aaPredicted RBP9.33□□□□□ -0.92
CLN8-207ENST00000524258 RAMP3O60896 148 aa9.33□□□□□ -0.92
CLN8-207ENST00000524258 NOL3O60936 208 aaKnown RBP9.33□□□□□ -0.92
CLN8-207ENST00000524258 PGLYRP1O75594 196 aaPredicted RBP9.33□□□□□ -0.92
CLN8-207ENST00000524258 OPN1MWP04001 364 aa9.33□□□□□ -0.92
CLN8-207ENST00000524258 RPLP1P05386 114 aaKnown RBP9.33□□□□□ -0.92
CLN8-207ENST00000524258 ELANEP08246 267 aa9.33□□□□□ -0.92
CLN8-207ENST00000524258 SAA1P0DJI8 122 aaPredicted RBP9.33□□□□□ -0.92
CLN8-207ENST00000524258 OPN1MW2P0DN77 364 aa9.33□□□□□ -0.92
CLN8-207ENST00000524258 OPN1MW3P0DN78 364 aa9.33□□□□□ -0.92
CLN8-207ENST00000524258 UCP3P55916 312 aa9.33□□□□□ -0.92
CLN8-207ENST00000524258 MRPS10P82664 201 aaKnown RBP9.33□□□□□ -0.92
CLN8-207ENST00000524258 SSBP1Q04837 148 aaKnown RBP9.33□□□□□ -0.92
CLN8-207ENST00000524258 OR2B11Q5JQS5 317 aa9.33□□□□□ -0.92
CLN8-207ENST00000524258 TEX38Q6PEX7 206 aa9.33□□□□□ -0.92
CLN8-207ENST00000524258 TMEM17Q86X19 198 aa9.33□□□□□ -0.92
CLN8-207ENST00000524258 PUSL1Q8N0Z8 303 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms