RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 CHRNA7P36544 502 aa13.42□□□□□ -0.26
CCNC-213ENST00000523541 KRTAP10-11P60412 298 aa13.42□□□□□ -0.26
CCNC-213ENST00000523541 NDPQ00604 133 aa13.42□□□□□ -0.26
CCNC-213ENST00000523541 FXYD3Q14802 87 aa13.42□□□□□ -0.26
CCNC-213ENST00000523541 MSMO1Q15800 293 aa13.42□□□□□ -0.26
CCNC-213ENST00000523541 OR11H1Q8NG94 326 aa13.42□□□□□ -0.26
CCNC-213ENST00000523541 OR1N2Q8NGR9 330 aa13.42□□□□□ -0.26
CCNC-213ENST00000523541 OR5H6Q8NGV6 325 aa13.42□□□□□ -0.26
CCNC-213ENST00000523541 ARPC1AQ92747 370 aa13.42□□□□□ -0.26
CCNC-213ENST00000523541 KCTD12Q96CX2 325 aaKnown RBP13.42□□□□□ -0.26
CCNC-213ENST00000523541 SLC25A38Q96DW6 304 aa13.42□□□□□ -0.26
CCNC-213ENST00000523541 HARBI1Q96MB7 349 aa13.42□□□□□ -0.26
CCNC-213ENST00000523541 PRELID3BQ9Y3B1 194 aa13.42□□□□□ -0.26
CCNC-213ENST00000523541 FBXO7Q9Y3I1 522 aa13.42□□□□□ -0.26
CCNC-213ENST00000523541 K7EIL1 84 aa13.41□□□□□ -0.26
CCNC-213ENST00000523541 XRCC3O43542 346 aa13.41□□□□□ -0.26
CCNC-213ENST00000523541 TUSC2O75896 110 aa13.41□□□□□ -0.26
CCNC-213ENST00000523541 INSL3P51460 131 aa13.41□□□□□ -0.26
CCNC-213ENST00000523541 UBE2KP61086 200 aa13.41□□□□□ -0.26
CCNC-213ENST00000523541 ZNF616Q08AN1 781 aa13.41□□□□□ -0.26
CCNC-213ENST00000523541 C9orf66Q5T8R8 295 aa13.41□□□□□ -0.26
CCNC-213ENST00000523541 UNQ5815/PRO19632Q6UWF5 114 aa13.41□□□□□ -0.26
CCNC-213ENST00000523541 HOGA1Q86XE5 327 aa13.41□□□□□ -0.26
CCNC-213ENST00000523541 BVESQ8NE79 360 aa13.41□□□□□ -0.26
CCNC-213ENST00000523541 OR5B12Q96R08 314 aa13.41□□□□□ -0.26
CCNC-213ENST00000523541 CLCC1Q96S66 551 aa13.41□□□□□ -0.26
CCNC-213ENST00000523541 HSD17B10Q99714 261 aaKnown RBP13.41□□□□□ -0.26
CCNC-213ENST00000523541 AUNIPQ9H7T9 357 aa13.41□□□□□ -0.26
CCNC-213ENST00000523541 WI2-2373I1.2A0A1W2PRP0 233 aa13.4□□□□□ -0.26
CCNC-213ENST00000523541 CREBL2O60519 120 aaPredicted RBP13.4□□□□□ -0.26
CCNC-213ENST00000523541 CNIH1O95406 144 aa13.4□□□□□ -0.26
CCNC-213ENST00000523541 RPS19P39019 145 aaKnown RBP13.4□□□□□ -0.26
CCNC-213ENST00000523541 ARPC4P59998 168 aa13.4□□□□□ -0.26
CCNC-213ENST00000523541 VMA21Q3ZAQ7 101 aa13.4□□□□□ -0.26
CCNC-213ENST00000523541 OVCH2Q7RTZ1 564 aa13.4□□□□□ -0.26
CCNC-213ENST00000523541 LFNGQ8NES3 379 aa13.4□□□□□ -0.26
CCNC-213ENST00000523541 BEST4Q8NFU0 473 aa13.4□□□□□ -0.26
CCNC-213ENST00000523541 CMTM3Q96MX0 182 aa13.4□□□□□ -0.26
CCNC-213ENST00000523541 MRPS7Q9Y2R9 242 aaKnown RBP13.4□□□□□ -0.26
CCNC-213ENST00000523541 SOX15O60248 233 aa13.39□□□□□ -0.27
CCNC-213ENST00000523541 NFYAP23511 347 aaPredicted RBP13.39□□□□□ -0.27
CCNC-213ENST00000523541 DGCR2P98153 550 aa13.39□□□□□ -0.27
CCNC-213ENST00000523541 UBE2NLQ5JXB2 153 aa13.39□□□□□ -0.27
CCNC-213ENST00000523541 ZNF66Q6ZN08 573 aa13.39□□□□□ -0.27
CCNC-213ENST00000523541 ZBTB34Q8NCN2 500 aa13.39□□□□□ -0.27
CCNC-213ENST00000523541 SLC25A46Q96AG3 418 aa13.39□□□□□ -0.27
CCNC-213ENST00000523541 C5orf30Q96GV9 206 aa13.39□□□□□ -0.27
CCNC-213ENST00000523541 GNB4Q9HAV0 340 aa13.39□□□□□ -0.27
CCNC-213ENST00000523541 RBMX2Q9Y388 322 aaKnown RBP13.39□□□□□ -0.27
CCNC-213ENST00000523541 A0A0G2JLM5 398 aa13.38□□□□□ -0.27
CCNC-213ENST00000523541 SRRM4A7MD48 611 aaKnown RBP13.38□□□□□ -0.27
CCNC-213ENST00000523541 LINC00473A8K010 186 aa13.38□□□□□ -0.27
CCNC-213ENST00000523541 SEC14L6B5MCN3 397 aa13.38□□□□□ -0.27
CCNC-213ENST00000523541 LGALS1P09382 135 aaKnown RBP13.38□□□□□ -0.27
CCNC-213ENST00000523541 RHOVQ96L33 236 aa13.38□□□□□ -0.27
CCNC-213ENST00000523541 AIFM2Q9BRQ8 373 aa13.38□□□□□ -0.27
CCNC-213ENST00000523541 LINC01619G3V211 115 aa13.37□□□□□ -0.27
CCNC-213ENST00000523541 CRYZL1O95825 349 aa13.37□□□□□ -0.27
CCNC-213ENST00000523541 IGLV2-14P01704 120 aa13.37□□□□□ -0.27
CCNC-213ENST00000523541 AADACP22760 399 aa13.37□□□□□ -0.27
CCNC-213ENST00000523541 CD69Q07108 199 aa13.37□□□□□ -0.27
CCNC-213ENST00000523541 KCTD9Q7L273 389 aa13.37□□□□□ -0.27
CCNC-213ENST00000523541 POC5Q8NA72 575 aa13.37□□□□□ -0.27
CCNC-213ENST00000523541 OR5AP2Q8NGF4 316 aa13.37□□□□□ -0.27
CCNC-213ENST00000523541 GIMAP1Q8WWP7 306 aa13.37□□□□□ -0.27
CCNC-213ENST00000523541 BORCS5Q969J3 196 aa13.37□□□□□ -0.27
CCNC-213ENST00000523541 FAM103A1Q9BTL3 118 aaKnown RBP13.37□□□□□ -0.27
CCNC-213ENST00000523541 HSPB1P04792 205 aaKnown RBP13.36□□□□□ -0.27
CCNC-213ENST00000523541 FCGR2CP31995 323 aa13.36□□□□□ -0.27
CCNC-213ENST00000523541 KIR2DS2P43631 304 aa13.36□□□□□ -0.27
CCNC-213ENST00000523541 GNB1P62873 340 aa13.36□□□□□ -0.27
CCNC-213ENST00000523541 SSBP2P81877 361 aaPredicted RBP13.36□□□□□ -0.27
CCNC-213ENST00000523541 PRSS8Q16651 343 aa13.36□□□□□ -0.27
CCNC-213ENST00000523541 GRPEL2Q8TAA5 225 aa13.36□□□□□ -0.27
CCNC-213ENST00000523541 VSTM2AQ8TAG5 236 aa13.36□□□□□ -0.27
CCNC-213ENST00000523541 CASTOR1Q8WTX7 329 aa13.36□□□□□ -0.27
CCNC-213ENST00000523541 ACOT12Q8WYK0 555 aa13.36□□□□□ -0.27
CCNC-213ENST00000523541 FUNDC2Q9BWH2 189 aa13.36□□□□□ -0.27
CCNC-213ENST00000523541 TPSG1Q9NRR2 321 aa13.36□□□□□ -0.27
CCNC-213ENST00000523541 ZNF355PQ9NSJ1 428 aa13.36□□□□□ -0.27
CCNC-213ENST00000523541 IGKV1D-13A0A0B4J2D9 117 aa13.35□□□□□ -0.27
CCNC-213ENST00000523541 FCGR3BO75015 233 aa13.35□□□□□ -0.27
CCNC-213ENST00000523541 TRGV3P03979 118 aa13.35□□□□□ -0.27
CCNC-213ENST00000523541 IGKV1-13P0DP09 117 aa13.35□□□□□ -0.27
CCNC-213ENST00000523541 ECI1P42126 302 aa13.35□□□□□ -0.27
CCNC-213ENST00000523541 TPPP2P59282 170 aa13.35□□□□□ -0.27
CCNC-213ENST00000523541 PJVKQ0ZLH3 352 aa13.35□□□□□ -0.27
CCNC-213ENST00000523541 EIF4EBP1Q13541 118 aaPredicted RBP13.35□□□□□ -0.27
CCNC-213ENST00000523541 CDK10Q15131 360 aa13.35□□□□□ -0.27
CCNC-213ENST00000523541 TMEM69Q5SWH9 247 aa13.35□□□□□ -0.27
CCNC-213ENST00000523541 ZNF429Q86V71 674 aa13.35□□□□□ -0.27
CCNC-213ENST00000523541 MMD2Q8IY49 270 aa13.35□□□□□ -0.27
CCNC-213ENST00000523541 MFSD4AQ8N468 514 aa13.35□□□□□ -0.27
CCNC-213ENST00000523541 GVQW1Q8N7I0 195 aa13.35□□□□□ -0.27
CCNC-213ENST00000523541 SAMD12Q8N8I0 201 aa13.35□□□□□ -0.27
CCNC-213ENST00000523541 OR13F1Q8NGS4 319 aa13.35□□□□□ -0.27
CCNC-213ENST00000523541 OR4S2Q8NH73 311 aa13.35□□□□□ -0.27
CCNC-213ENST00000523541 USMG5Q96IX5 58 aa13.35□□□□□ -0.27
CCNC-213ENST00000523541 DCUN1D5Q9BTE7 237 aa13.35□□□□□ -0.27
CCNC-213ENST00000523541 SCOCQ9UIL1 159 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms