RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 PRSS46E5RG02 174 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 F2Z2F3 143 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 HSBP1O75506 76 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 S1PR2O95136 353 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 NUDT3O95989 172 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 MT-ND6P03923 174 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 CD46P15529 392 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 TIMP3P35625 211 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 ZXDAP98168 799 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 FAM19A2Q8N3H0 131 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 OR2M3Q8NG83 312 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 CCL4L1Q8NHW4 92 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 DPF1Q92782 380 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 KLHDC7BQ96G42 594 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 NBASA2RRP1 2371 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 A0A0G2JRQ6 117 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 PRSS38A1L453 326 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 TMEM150CB9EJG8 249 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 G3V4G9 280 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 TLX3O43711 291 aaPredicted RBP7.07□□□□□ -1.28
CSMD1-213ENST00000523488 RBMXL2O75526 392 aaKnown RBP7.07□□□□□ -1.28
CSMD1-213ENST00000523488 PSG4Q00888 419 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 SAMD13Q5VXD3 122 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 UBALD2Q8IYN6 164 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 LRFN3Q9BTN0 628 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 GNB4Q9HAV0 340 aa7.07□□□□□ -1.28
CSMD1-213ENST00000523488 TRBV20OR9-2A0A075B6H5 130 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 GAGE10A6NGK3 116 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 OR2T8A6NH00 312 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 C17orf112F2Z3M2 114 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 CORTO00230 105 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 GNB1P62873 340 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 RPS21P63220 83 aaKnown RBP7.06□□□□□ -1.28
CSMD1-213ENST00000523488 RELBQ01201 579 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 RUNX3Q13761 415 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 CST6Q15828 149 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 PIGYQ3MUY2 71 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 ZNF324BQ6AW86 544 aaPredicted RBP7.06□□□□□ -1.28
CSMD1-213ENST00000523488 OSR2Q8N2R0 312 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 OR1K1Q8NGR3 316 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 GNG7O60262 68 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 CA7P43166 264 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 CNN3Q15417 329 aaKnown RBP7.06□□□□□ -1.28
CSMD1-213ENST00000523488 MPV17L2Q567V2 206 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 LCN12Q6JVE5 192 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 ACSM6Q6P461 480 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 ZNF818PQ6ZRF7 136 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 LCNL1Q6ZST4 164 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 LINC00596Q86U02 117 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 ST6GALNAC6Q969X2 333 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 C2orf72A6NCS6 295 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 SLC22A20A6NK97 555 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 SLC17A3O00476 420 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 PDCD6O75340 191 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 OR2J3O76001 311 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 MFAP5Q13361 173 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 OR2Y1Q8NGV0 311 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 CPT1CQ8TCG5 803 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 CLUHP3Q96NS8 147 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 PSG11Q9UQ72 335 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 CACNA1DQ01668 2161 aa7.06□□□□□ -1.28
CSMD1-213ENST00000523488 TRAV9-2A0A087WT02 112 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 A0A1W2PS18 150 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 C2orf70A6NJV1 201 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 RBFOX2O43251 390 aaKnown RBP eCLIP7.05□□□□□ -1.28
CSMD1-213ENST00000523488 MT-CO2P00403 227 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 SMIM17P0DL12 118 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 GFRA1P56159 465 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 RPEL1Q2QD12 228 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 ERRFI1Q9UJM3 462 aaPredicted RBP7.05□□□□□ -1.28
CSMD1-213ENST00000523488 V9GYV3 84 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 IGKV1-12A0A0C4DH73 117 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 ZNF324O75467 553 aaPredicted RBP7.05□□□□□ -1.28
CSMD1-213ENST00000523488 IGKV1D-12P01611 117 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 PPIAL4GP0DN37 164 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 CAPZBP47756 277 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 WDR73Q6P4I2 378 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 TMEM136Q6ZRR5 245 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 GATD1Q8NB37 220 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 FAM216AQ8WUB2 273 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 TMEM186Q96B77 213 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 QTRT1Q9BXR0 403 aaKnown RBP7.05□□□□□ -1.28
CSMD1-213ENST00000523488 CFHR5Q9BXR6 569 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 PLEK2Q9NYT0 353 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 CLEC1BQ9P126 229 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 IGKV1-6A0A0C4DH72 117 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 A0A1B0GV72 72 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 RHBDL1O75783 438 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 APOA2P02652 100 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 IGLC1P0CG04 106 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 SRIP30626 198 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 LTBRP36941 435 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 LGALS7P47929 136 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 RPS16P62249 146 aaKnown RBP7.05□□□□□ -1.28
CSMD1-213ENST00000523488 PSG7Q13046 419 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 C12orf54Q6X4T0 127 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 GTF2H5Q6ZYL4 71 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 OR8I2Q8N0Y5 310 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 SCCPDHQ8NBX0 429 aa7.05□□□□□ -1.28
CSMD1-213ENST00000523488 RPP25Q9BUL9 199 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms