RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 RRP15Q9Y3B9 282 aaKnown RBP15.95■□□□□ 0.14
SDCBP-209ENST00000522243 DNAH9Q9NYC9 4486 aa15.94■□□□□ 0.14
SDCBP-209ENST00000522243 APELAP0DMC3 54 aa15.94■□□□□ 0.14
SDCBP-209ENST00000522243 DUTP33316 252 aaKnown RBP15.94■□□□□ 0.14
SDCBP-209ENST00000522243 DEFA5Q01523 94 aa15.94■□□□□ 0.14
SDCBP-209ENST00000522243 ACSM6Q6P461 480 aa15.94■□□□□ 0.14
SDCBP-209ENST00000522243 Q6ZS49 121 aa15.94■□□□□ 0.14
SDCBP-209ENST00000522243 NUDCD2Q8WVJ2 157 aa15.94■□□□□ 0.14
SDCBP-209ENST00000522243 FCGR1BQ92637 280 aa15.94■□□□□ 0.14
SDCBP-209ENST00000522243 WWC2-AS2Q96NR7 200 aa15.94■□□□□ 0.14
SDCBP-209ENST00000522243 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.94■□□□□ 0.14
SDCBP-209ENST00000522243 TMEM235A6NFC5 223 aa15.93■□□□□ 0.14
SDCBP-209ENST00000522243 LINC00473A8K010 186 aa15.93■□□□□ 0.14
SDCBP-209ENST00000522243 CRYZL1O95825 349 aa15.93■□□□□ 0.14
SDCBP-209ENST00000522243 RRASP10301 218 aa15.93■□□□□ 0.14
SDCBP-209ENST00000522243 SPNP16150 400 aa15.93■□□□□ 0.14
SDCBP-209ENST00000522243 NFYAP23511 347 aaPredicted RBP15.93■□□□□ 0.14
SDCBP-209ENST00000522243 DTYMKP23919 212 aa15.93■□□□□ 0.14
SDCBP-209ENST00000522243 PITPNAQ00169 270 aa15.93■□□□□ 0.14
SDCBP-209ENST00000522243 TAGLNQ01995 201 aaKnown RBP15.93■□□□□ 0.14
SDCBP-209ENST00000522243 MXD1Q05195 221 aa15.93■□□□□ 0.14
SDCBP-209ENST00000522243 ARL6IP1Q15041 203 aa15.93■□□□□ 0.14
SDCBP-209ENST00000522243 MRGPRG-AS1Q2M3A8 158 aa15.93■□□□□ 0.14
SDCBP-209ENST00000522243 HACD4Q5VWC8 232 aa15.93■□□□□ 0.14
SDCBP-209ENST00000522243 LGALS14Q8TCE9 139 aa15.93■□□□□ 0.14
SDCBP-209ENST00000522243 DDB2Q92466 427 aa15.93■□□□□ 0.14
SDCBP-209ENST00000522243 RNF167Q9H6Y7 350 aa15.93■□□□□ 0.14
SDCBP-209ENST00000522243 SMAD5-AS1Q9Y6J3 95 aa15.93■□□□□ 0.14
SDCBP-209ENST00000522243 C13orf42A0A1B0GVH6 325 aa15.92■□□□□ 0.14
SDCBP-209ENST00000522243 ANKRD34BA5PLL1 514 aa15.92■□□□□ 0.14
SDCBP-209ENST00000522243 CLEC2LP0C7M8 214 aa15.92■□□□□ 0.14
SDCBP-209ENST00000522243 NHLRC4P0CG21 123 aaPredicted RBP15.92■□□□□ 0.14
SDCBP-209ENST00000522243 SFXN4Q6P4A7 337 aa15.92■□□□□ 0.14
SDCBP-209ENST00000522243 IDO2Q6ZQW0 420 aa15.92■□□□□ 0.14
SDCBP-209ENST00000522243 HAPLN4Q86UW8 402 aa15.92■□□□□ 0.14
SDCBP-209ENST00000522243 TPRA1Q86W33 373 aa15.92■□□□□ 0.14
SDCBP-209ENST00000522243 ADTRPQ96IZ2 230 aa15.92■□□□□ 0.14
SDCBP-209ENST00000522243 PHB2Q99623 299 aa15.92■□□□□ 0.14
SDCBP-209ENST00000522243 CENPOQ9BU64 300 aa15.92■□□□□ 0.14
SDCBP-209ENST00000522243 YTHDF1Q9BYJ9 559 aaKnown RBP15.92■□□□□ 0.14
SDCBP-209ENST00000522243 U3KQK5 164 aa15.92■□□□□ 0.14
SDCBP-209ENST00000522243 H3BUA1 57 aa15.91■□□□□ 0.14
SDCBP-209ENST00000522243 SDC2P34741 201 aa15.91■□□□□ 0.14
SDCBP-209ENST00000522243 TNXAQ16473 311 aa15.91■□□□□ 0.14
SDCBP-209ENST00000522243 VMA21Q3ZAQ7 101 aa15.91■□□□□ 0.14
SDCBP-209ENST00000522243 OR4C12Q96R67 309 aa15.91■□□□□ 0.14
SDCBP-209ENST00000522243 COA4Q9NYJ1 87 aa15.91■□□□□ 0.14
SDCBP-209ENST00000522243 COL7A1Q02388 2944 aa15.91■□□□□ 0.14
SDCBP-209ENST00000522243 MSGN1A6NI15 193 aa15.9■□□□□ 0.14
SDCBP-209ENST00000522243 GP9P14770 177 aa15.9■□□□□ 0.14
SDCBP-209ENST00000522243 GNG2P59768 71 aa15.9■□□□□ 0.14
SDCBP-209ENST00000522243 ZNF773Q6PK81 442 aa15.9■□□□□ 0.14
SDCBP-209ENST00000522243 TEX45Q8NA69 505 aa15.9■□□□□ 0.14
SDCBP-209ENST00000522243 OR6Q1Q8NGQ2 317 aa15.9■□□□□ 0.14
SDCBP-209ENST00000522243 RANGRFQ9HD47 186 aaPredicted RBP15.9■□□□□ 0.14
SDCBP-209ENST00000522243 OR2W1Q9Y3N9 320 aa15.9■□□□□ 0.14
SDCBP-209ENST00000522243 SORL1Q92673 2214 aa15.89■□□□□ 0.13
SDCBP-209ENST00000522243 SSX5O60225 188 aa15.89■□□□□ 0.13
SDCBP-209ENST00000522243 FCGR3BO75015 233 aa15.89■□□□□ 0.13
SDCBP-209ENST00000522243 UBE2KP61086 200 aa15.89■□□□□ 0.13
SDCBP-209ENST00000522243 PRSS8Q16651 343 aa15.89■□□□□ 0.13
SDCBP-209ENST00000522243 OR2B11Q5JQS5 317 aa15.89■□□□□ 0.13
SDCBP-209ENST00000522243 ZNF645Q8N7E2 425 aa15.89■□□□□ 0.13
SDCBP-209ENST00000522243 OR5H6Q8NGV6 325 aa15.89■□□□□ 0.13
SDCBP-209ENST00000522243 ACOT12Q8WYK0 555 aa15.89■□□□□ 0.13
SDCBP-209ENST00000522243 TMEM68Q96MH6 324 aa15.89■□□□□ 0.13
SDCBP-209ENST00000522243 DCUN1D5Q9BTE7 237 aa15.89■□□□□ 0.13
SDCBP-209ENST00000522243 RSRP1Q9BUV0 290 aa15.89■□□□□ 0.13
SDCBP-209ENST00000522243 DCSTAMPQ9H295 470 aa15.89■□□□□ 0.13
SDCBP-209ENST00000522243 RHBDL2Q9NX52 303 aa15.89■□□□□ 0.13
SDCBP-209ENST00000522243 IGKV1D-13A0A0B4J2D9 117 aa15.88■□□□□ 0.13
SDCBP-209ENST00000522243 A0A0G2JLM5 398 aa15.88■□□□□ 0.13
SDCBP-209ENST00000522243 LOC100506127A0A0U1RQW1 187 aa15.88■□□□□ 0.13
SDCBP-209ENST00000522243 TUSC2O75896 110 aa15.88■□□□□ 0.13
SDCBP-209ENST00000522243 HLA-DQB1P01920 261 aa15.88■□□□□ 0.13
SDCBP-209ENST00000522243 CTXN2P0C2S0 81 aa15.88■□□□□ 0.13
SDCBP-209ENST00000522243 IGKV1-13P0DP09 117 aa15.88■□□□□ 0.13
SDCBP-209ENST00000522243 RPL30P62888 115 aaKnown RBP15.88■□□□□ 0.13
SDCBP-209ENST00000522243 NEDD8Q15843 81 aa15.88■□□□□ 0.13
SDCBP-209ENST00000522243 IDNKQ5T6J7 187 aa15.88■□□□□ 0.13
SDCBP-209ENST00000522243 CNIH2Q6PI25 160 aa15.88■□□□□ 0.13
SDCBP-209ENST00000522243 OVCH2Q7RTZ1 564 aa15.88■□□□□ 0.13
SDCBP-209ENST00000522243 SRSF12Q8WXF0 261 aaKnown RBP15.88■□□□□ 0.13
SDCBP-209ENST00000522243 TINAGL1Q9GZM7 467 aaPredicted RBP15.88■□□□□ 0.13
SDCBP-209ENST00000522243 RBMX2Q9Y388 322 aaKnown RBP15.88■□□□□ 0.13
SDCBP-209ENST00000522243 TRIM64CA6NLI5 447 aa15.87■□□□□ 0.13
SDCBP-209ENST00000522243 SCGNO76038 276 aa15.87■□□□□ 0.13
SDCBP-209ENST00000522243 ZP3P21754 424 aa15.87■□□□□ 0.13
SDCBP-209ENST00000522243 KCTD9Q7L273 389 aa15.87■□□□□ 0.13
SDCBP-209ENST00000522243 OSR1Q8TAX0 266 aaPredicted RBP15.87■□□□□ 0.13
SDCBP-209ENST00000522243 ELOVL1Q9BW60 279 aa15.87■□□□□ 0.13
SDCBP-209ENST00000522243 ZNF430Q9H8G1 570 aaPredicted RBP15.87■□□□□ 0.13
SDCBP-209ENST00000522243 ANXA10Q9UJ72 324 aa15.87■□□□□ 0.13
SDCBP-209ENST00000522243 MPPED1O15442 326 aa15.86■□□□□ 0.13
SDCBP-209ENST00000522243 RBMXL2O75526 392 aaKnown RBP15.86■□□□□ 0.13
SDCBP-209ENST00000522243 IGLV2-14P01704 120 aa15.86■□□□□ 0.13
SDCBP-209ENST00000522243 TRBV12-3P01733 135 aa15.86■□□□□ 0.13
SDCBP-209ENST00000522243 SAA1P0DJI8 122 aaPredicted RBP15.86■□□□□ 0.13
SDCBP-209ENST00000522243 DYRK1AQ13627 763 aa15.86■□□□□ 0.13
SDCBP-209ENST00000522243 SBSPONQ8IVN8 264 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms