RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 LGALS4P56470 323 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 RTL8BQ17RB0 113 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 SP6Q3SY56 376 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 GPR157Q5UAW9 335 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 DHRS7BQ6IAN0 325 aaPredicted RBP10.57□□□□□ -0.72
CPNE3-205ENST00000522240 CCDC144NLQ6NUI1 221 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 SPAG16Q8N0X2 631 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 CIARTQ8N365 385 aaPredicted RBP10.57□□□□□ -0.72
CPNE3-205ENST00000522240 ZNF383Q8NA42 475 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 OR5AN1Q8NGI8 311 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 OR4S2Q8NH73 311 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 RBPMSQ93062 196 aaKnown RBP10.57□□□□□ -0.72
CPNE3-205ENST00000522240 RAB18Q9NP72 206 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 COMMD9Q9P000 198 aa10.57□□□□□ -0.72
CPNE3-205ENST00000522240 NSD1Q96L73 2696 aaPredicted RBP10.57□□□□□ -0.72
CPNE3-205ENST00000522240 WNK2Q9Y3S1 2297 aa10.56□□□□□ -0.72
CPNE3-205ENST00000522240 VPS13CQ709C8 3753 aa10.56□□□□□ -0.72
CPNE3-205ENST00000522240 IGHV1-3A0A0C4DH29 117 aa10.56□□□□□ -0.72
CPNE3-205ENST00000522240 A0A1W2PPI3 338 aa10.56□□□□□ -0.72
CPNE3-205ENST00000522240 H0YJW9 148 aa10.56□□□□□ -0.72
CPNE3-205ENST00000522240 ATG12O94817 140 aa10.56□□□□□ -0.72
CPNE3-205ENST00000522240 SAA4P35542 130 aa10.56□□□□□ -0.72
CPNE3-205ENST00000522240 BPIFB3P59826 476 aa10.56□□□□□ -0.72
CPNE3-205ENST00000522240 FCN2Q15485 313 aa10.56□□□□□ -0.72
CPNE3-205ENST00000522240 ZNF585BQ52M93 769 aa10.56□□□□□ -0.72
CPNE3-205ENST00000522240 LDLRAD2Q5SZI1 272 aa10.56□□□□□ -0.72
CPNE3-205ENST00000522240 LIN54Q6MZP7 749 aa10.56□□□□□ -0.72
CPNE3-205ENST00000522240 PDPNQ86YL7 162 aa10.56□□□□□ -0.72
CPNE3-205ENST00000522240 TEX29Q8N6K0 151 aa10.56□□□□□ -0.72
CPNE3-205ENST00000522240 DRAXINQ8NBI3 349 aaPredicted RBP10.56□□□□□ -0.72
CPNE3-205ENST00000522240 LHFPL5Q8TAF8 219 aa10.56□□□□□ -0.72
CPNE3-205ENST00000522240 C18orf12Q96KH6 178 aa10.56□□□□□ -0.72
CPNE3-205ENST00000522240 PLEKHA2Q9HB19 425 aa10.56□□□□□ -0.72
CPNE3-205ENST00000522240 SLC35D1Q9NTN3 355 aa10.56□□□□□ -0.72
CPNE3-205ENST00000522240 PRR13Q9NZ81 148 aa10.56□□□□□ -0.72
CPNE3-205ENST00000522240 MGAT4CQ9UBM8 478 aa10.56□□□□□ -0.72
CPNE3-205ENST00000522240 FCGR3BO75015 233 aa10.55□□□□□ -0.72
CPNE3-205ENST00000522240 HPRT1P00492 218 aa10.55□□□□□ -0.72
CPNE3-205ENST00000522240 FSHBP01225 129 aa10.55□□□□□ -0.72
CPNE3-205ENST00000522240 MC5RP33032 325 aa10.55□□□□□ -0.72
CPNE3-205ENST00000522240 REG1BP48304 166 aa10.55□□□□□ -0.72
CPNE3-205ENST00000522240 ARHGDIBP52566 201 aa10.55□□□□□ -0.72
CPNE3-205ENST00000522240 BRWD1-AS2P59051 145 aa10.55□□□□□ -0.72
CPNE3-205ENST00000522240 DIAPH2-AS1Q14236 149 aa10.55□□□□□ -0.72
CPNE3-205ENST00000522240 HABP2Q14520 560 aaPredicted RBP10.55□□□□□ -0.72
CPNE3-205ENST00000522240 OR2B11Q5JQS5 317 aa10.55□□□□□ -0.72
CPNE3-205ENST00000522240 TMEM268Q5VZI3 342 aa10.55□□□□□ -0.72
CPNE3-205ENST00000522240 LHFPL4Q7Z7J7 247 aa10.55□□□□□ -0.72
CPNE3-205ENST00000522240 ZNF695Q8IW36 515 aa10.55□□□□□ -0.72
CPNE3-205ENST00000522240 PDZD9Q8IXQ8 264 aa10.55□□□□□ -0.72
CPNE3-205ENST00000522240 SELENOHQ8IZQ5 122 aaKnown RBP10.55□□□□□ -0.72
CPNE3-205ENST00000522240 SLC35G3Q8N808 338 aa10.55□□□□□ -0.72
CPNE3-205ENST00000522240 OR5M8Q8NGP6 311 aa10.55□□□□□ -0.72
CPNE3-205ENST00000522240 ASB13Q8WXK3 278 aa10.55□□□□□ -0.72
CPNE3-205ENST00000522240 MALSU1Q96EH3 234 aa10.55□□□□□ -0.72
CPNE3-205ENST00000522240 WASHC3Q9Y3C0 194 aa10.55□□□□□ -0.72
CPNE3-205ENST00000522240 TMED3Q9Y3Q3 217 aa10.55□□□□□ -0.72
CPNE3-205ENST00000522240 JMJD1CQ15652 2540 aa10.55□□□□□ -0.72
CPNE3-205ENST00000522240 TMEM238LA0A1B0GVL6 79 aa10.54□□□□□ -0.72
CPNE3-205ENST00000522240 A0A1W2PRD5 423 aa10.54□□□□□ -0.72
CPNE3-205ENST00000522240 A0A1W2PRF3 423 aa10.54□□□□□ -0.72
CPNE3-205ENST00000522240 A0A1W2PRM7 423 aa10.54□□□□□ -0.72
CPNE3-205ENST00000522240 GOSR2O14653 212 aa10.54□□□□□ -0.72
CPNE3-205ENST00000522240 SMAD7O15105 426 aaKnown RBP10.54□□□□□ -0.72
CPNE3-205ENST00000522240 CD5LO43866 347 aa10.54□□□□□ -0.72
CPNE3-205ENST00000522240 RAMP3O60896 148 aa10.54□□□□□ -0.72
CPNE3-205ENST00000522240 S1PR2O95136 353 aa10.54□□□□□ -0.72
CPNE3-205ENST00000522240 IFNA21P01568 189 aa10.54□□□□□ -0.72
CPNE3-205ENST00000522240 IGKV1-39P01597 117 aa10.54□□□□□ -0.72
CPNE3-205ENST00000522240 IGKV1D-39P04432 117 aa10.54□□□□□ -0.72
CPNE3-205ENST00000522240 VDAC1P21796 283 aa10.54□□□□□ -0.72
CPNE3-205ENST00000522240 LPAR6P43657 344 aa10.54□□□□□ -0.72
CPNE3-205ENST00000522240 LINC00205P59089 165 aa10.54□□□□□ -0.72
CPNE3-205ENST00000522240 KRTAP1-1Q07627 177 aa10.54□□□□□ -0.72
CPNE3-205ENST00000522240 KLF17Q5JT82 389 aaPredicted RBP10.54□□□□□ -0.72
CPNE3-205ENST00000522240 FAM219AQ8IW50 185 aa10.54□□□□□ -0.72
CPNE3-205ENST00000522240 UXS1Q8NBZ7 420 aa10.54□□□□□ -0.72
CPNE3-205ENST00000522240 OR11H7Q8NGC8 314 aa10.54□□□□□ -0.72
CPNE3-205ENST00000522240 LSM10Q969L4 123 aaKnown RBP10.54□□□□□ -0.72
CPNE3-205ENST00000522240 A8MV72 311 aaPredicted RBP10.53□□□□□ -0.72
CPNE3-205ENST00000522240 ADAP1O75689 374 aa10.53□□□□□ -0.72
CPNE3-205ENST00000522240 CRYZL1O95825 349 aa10.53□□□□□ -0.72
CPNE3-205ENST00000522240 IGHV4-38-2P0DP08 117 aa10.53□□□□□ -0.72
CPNE3-205ENST00000522240 FOSL1P15407 271 aa10.53□□□□□ -0.72
CPNE3-205ENST00000522240 NQO2P16083 231 aa10.53□□□□□ -0.72
CPNE3-205ENST00000522240 CD1BP29016 333 aa10.53□□□□□ -0.72
CPNE3-205ENST00000522240 AKR1C2P52895 323 aa10.53□□□□□ -0.72
CPNE3-205ENST00000522240 POU2AF1Q16633 256 aa10.53□□□□□ -0.72
CPNE3-205ENST00000522240 C2orf68Q2NKX9 166 aa10.53□□□□□ -0.72
CPNE3-205ENST00000522240 TMEM177Q53S58 311 aa10.53□□□□□ -0.72
CPNE3-205ENST00000522240 NMSQ5H8A3 153 aa10.53□□□□□ -0.72
CPNE3-205ENST00000522240 GGNBP1Q5YKI7 109 aa10.53□□□□□ -0.72
CPNE3-205ENST00000522240 LYZL2Q7Z4W2 148 aa10.53□□□□□ -0.72
CPNE3-205ENST00000522240 AKAP14Q86UN6 197 aa10.53□□□□□ -0.72
CPNE3-205ENST00000522240 OR4C13Q8NGP0 309 aa10.53□□□□□ -0.72
CPNE3-205ENST00000522240 OSR1Q8TAX0 266 aaPredicted RBP10.53□□□□□ -0.72
CPNE3-205ENST00000522240 CFHR4Q92496 578 aa10.53□□□□□ -0.72
CPNE3-205ENST00000522240 AJUBAQ96IF1 538 aa10.53□□□□□ -0.72
CPNE3-205ENST00000522240 SPIN2AQ99865 258 aa10.53□□□□□ -0.72
CPNE3-205ENST00000522240 SPIN2BQ9BPZ2 258 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms