RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 AK6Q9Y3D8 172 aaKnown RBP2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 WDR45Q9Y484 360 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 PUS1Q9Y606 427 aaKnown RBP eCLIP2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 MRPS18BQ9Y676 258 aaKnown RBP2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 V9GYS6 101 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZNF318Q5VUA4 2279 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 CPAMD8Q8IZJ3 1885 aa2.33□□□□□ -2.04
HMGB1P41-201ENST00000520234 ATRXP46100 2492 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 PHF3Q92576 2039 aaKnown RBP2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 SCN3AQ9NY46 2000 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 A0A0A6YYH2 397 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 TGIF2-C20orf24A0A0A6YYL0 155 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 TRAV39A0A0B4J263 110 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 TRBV11-1A0A0K0K1C0 115 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 SMCO3A2RU48 225 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 A6NJ64 397 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZFP92A6NM28 416 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 CPSF4LA6NMK7 179 aaKnown RBP2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR4C45A6NMZ5 311 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 DHRS7CA6NNS2 312 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 RIIAD1A6NNX1 92 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZNF727A8MUV8 499 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 UMAD1C9J7I0 102 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 K7N7A8 449 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 DCTN6O00399 190 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 UPK3AO75631 287 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 CTAG2O75638 210 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 TNFSF13O75888 250 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 NDUFB2O95178 105 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 CST4P01036 141 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 IGLV3-19P01714 112 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 HSPB1P04792 205 aaKnown RBP2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 PCCBP05166 539 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 PFN1P07737 140 aaKnown RBP2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 SRP19P09132 144 aaKnown RBP2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 TACSTD2P09758 323 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 SLC35G6P0C7Q6 338 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 SEC11BP0C7V7 166 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 PGA3P0DJD8 388 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR5H8P0DN80 308 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZNF708P17019 499 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZNF19P17023 458 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 BMI1P35226 326 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 FAUP35544 74 aaKnown RBP2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 ARR3P36575 388 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 CTRLP40313 264 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 AQP2P41181 271 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 GPR4P46093 362 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 RPS10P46783 165 aaKnown RBP2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 GABRA4P48169 554 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 EFNA3P52797 238 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 PRPS1P60891 318 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 SUPT4H1P63272 117 aaKnown RBP2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 TLE4Q04727 773 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZNF154Q13106 437 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 USF2Q15853 346 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 GUK1Q16774 197 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 TDRG1Q3Y452 100 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 TRMT12Q53H54 448 aaKnown RBP2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 TCEAL5Q5H9L2 206 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 CLEC12AQ5QGZ9 265 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 TMEM69Q5SWH9 247 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 TPTE2P1Q5T6R2 138 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 AADACL3Q5VUY0 350 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 RPL7L1Q6DKI1 246 aaKnown RBP2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 BHLHA15Q7RTS1 189 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZNF550Q7Z398 422 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 ZNF101Q8IZC7 436 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 JAGN1Q8N5M9 183 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 Q8N7P7 452 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 SLC35G3Q8N808 338 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 COX18Q8N8Q8 333 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 Q8N976 141 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 LRRC75AQ8NAA5 344 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 INO80EQ8NBZ0 244 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 ACBD4Q8NC06 268 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR5AU1Q8NGC0 362 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR52L1Q8NGH7 329 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR56B2PQ8NGI1 322 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR13C2Q8NGS9 318 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR1P1Q8NH06 330 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR4X1Q8NH49 305 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 TERB2Q8NHR7 220 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 LINC01006Q8NI28 216 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 TSLPQ969D9 159 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 TMEM106AQ96A25 262 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 TMEM230Q96A57 120 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 SEC22AQ96IW7 307 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 C4orf36Q96KX1 117 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 BMFQ96LC9 184 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 TMEM56Q96MV1 263 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 MIEN1Q9BRT3 115 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 GINS3Q9BRX5 216 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 MRPL13Q9BYD1 178 aaKnown RBP2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR2J1Q9GZK6 312 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 Q9H3A6 140 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 RBKSQ9H477 322 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 METTL8Q9H825 291 aaKnown RBP2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 OR5AC2Q9NZP5 309 aa2.32□□□□□ -2.04
HMGB1P41-201ENST00000520234 MRPL27Q9P0M9 148 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms