RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 CRIP2P52943 208 aaPredicted RBP10.36□□□□□ -0.75
VEGFA-219ENST00000518824 TMEM177Q53S58 311 aa10.36□□□□□ -0.75
VEGFA-219ENST00000518824 TMEM69Q5SWH9 247 aa10.36□□□□□ -0.75
VEGFA-219ENST00000518824 IDO2Q6ZQW0 420 aa10.36□□□□□ -0.75
VEGFA-219ENST00000518824 LFNGQ8NES3 379 aa10.36□□□□□ -0.75
VEGFA-219ENST00000518824 ABHD5Q8WTS1 349 aa10.36□□□□□ -0.75
VEGFA-219ENST00000518824 HARBI1Q96MB7 349 aa10.36□□□□□ -0.75
VEGFA-219ENST00000518824 OR5B12Q96R08 314 aa10.36□□□□□ -0.75
VEGFA-219ENST00000518824 CCL28Q9NRJ3 127 aa10.36□□□□□ -0.75
VEGFA-219ENST00000518824 ANAPC10Q9UM13 185 aa10.36□□□□□ -0.75
VEGFA-219ENST00000518824 PRKDCP78527 4128 aaKnown RBP10.35□□□□□ -0.75
VEGFA-219ENST00000518824 CCL24O00175 119 aa10.35□□□□□ -0.75
VEGFA-219ENST00000518824 SHOXO15266 292 aa10.35□□□□□ -0.75
VEGFA-219ENST00000518824 TNFSF12O43508 249 aa10.35□□□□□ -0.75
VEGFA-219ENST00000518824 SPDEFO95238 335 aa10.35□□□□□ -0.75
VEGFA-219ENST00000518824 CDX1P47902 265 aaPredicted RBP10.35□□□□□ -0.75
VEGFA-219ENST00000518824 RFX2P48378 723 aa10.35□□□□□ -0.75
VEGFA-219ENST00000518824 ARPC4P59998 168 aa10.35□□□□□ -0.75
VEGFA-219ENST00000518824 GNB1P62873 340 aa10.35□□□□□ -0.75
VEGFA-219ENST00000518824 TAGLNQ01995 201 aaKnown RBP10.35□□□□□ -0.75
VEGFA-219ENST00000518824 FXYD3Q14802 87 aa10.35□□□□□ -0.75
VEGFA-219ENST00000518824 SPCS2Q15005 226 aa10.35□□□□□ -0.75
VEGFA-219ENST00000518824 ASPHD1Q5U4P2 390 aa10.35□□□□□ -0.75
VEGFA-219ENST00000518824 FOXB2Q5VYV0 432 aa10.35□□□□□ -0.75
VEGFA-219ENST00000518824 ZNF562Q6V9R5 426 aa10.35□□□□□ -0.75
VEGFA-219ENST00000518824 PPP1R27Q86WC6 154 aa10.35□□□□□ -0.75
VEGFA-219ENST00000518824 ZNF491Q8N8L2 437 aa10.35□□□□□ -0.75
VEGFA-219ENST00000518824 GRPEL2Q8TAA5 225 aa10.35□□□□□ -0.75
VEGFA-219ENST00000518824 SECTM1Q8WVN6 248 aa10.35□□□□□ -0.75
VEGFA-219ENST00000518824 KCTD12Q96CX2 325 aaKnown RBP10.35□□□□□ -0.75
VEGFA-219ENST00000518824 GON7Q9BXV9 100 aa10.35□□□□□ -0.75
VEGFA-219ENST00000518824 ALX4Q9H161 411 aaPredicted RBP10.35□□□□□ -0.75
VEGFA-219ENST00000518824 TAS2R8Q9NYW2 309 aa10.35□□□□□ -0.75
VEGFA-219ENST00000518824 MRPS7Q9Y2R9 242 aaKnown RBP10.35□□□□□ -0.75
VEGFA-219ENST00000518824 TNCP24821 2201 aa10.35□□□□□ -0.75
VEGFA-219ENST00000518824 FCGR3BO75015 233 aa10.34□□□□□ -0.75
VEGFA-219ENST00000518824 PPYP01298 95 aa10.34□□□□□ -0.75
VEGFA-219ENST00000518824 APELAP0DMC3 54 aa10.34□□□□□ -0.75
VEGFA-219ENST00000518824 OR5H8P0DN80 308 aa10.34□□□□□ -0.75
VEGFA-219ENST00000518824 HOXD3P31249 432 aaPredicted RBP10.34□□□□□ -0.75
VEGFA-219ENST00000518824 MYCNOSP40205 109 aa10.34□□□□□ -0.75
VEGFA-219ENST00000518824 RAB9AP51151 201 aa10.34□□□□□ -0.75
VEGFA-219ENST00000518824 FXYD4P59646 89 aa10.34□□□□□ -0.75
VEGFA-219ENST00000518824 KRTAP10-11P60412 298 aa10.34□□□□□ -0.75
VEGFA-219ENST00000518824 DEFA5Q01523 94 aa10.34□□□□□ -0.75
VEGFA-219ENST00000518824 RTL8BQ17RB0 113 aa10.34□□□□□ -0.75
VEGFA-219ENST00000518824 UNQ5815/PRO19632Q6UWF5 114 aa10.34□□□□□ -0.75
VEGFA-219ENST00000518824 KCTD9Q7L273 389 aa10.34□□□□□ -0.75
VEGFA-219ENST00000518824 SNX29P2Q8IUI4 249 aa10.34□□□□□ -0.75
VEGFA-219ENST00000518824 VKORC1L1Q8N0U8 176 aa10.34□□□□□ -0.75
VEGFA-219ENST00000518824 OR5AP2Q8NGF4 316 aa10.34□□□□□ -0.75
VEGFA-219ENST00000518824 ARPC1AQ92747 370 aa10.34□□□□□ -0.75
VEGFA-219ENST00000518824 MS4A10Q96PG2 267 aa10.34□□□□□ -0.75
VEGFA-219ENST00000518824 I3L521 148 aa10.33□□□□□ -0.76
VEGFA-219ENST00000518824 PMP2P02689 132 aa10.33□□□□□ -0.76
VEGFA-219ENST00000518824 SAA1P0DJI8 122 aaPredicted RBP10.33□□□□□ -0.76
VEGFA-219ENST00000518824 LGALS7P47929 136 aa10.33□□□□□ -0.76
VEGFA-219ENST00000518824 RORCP51449 518 aa10.33□□□□□ -0.76
VEGFA-219ENST00000518824 RAB25P57735 213 aa10.33□□□□□ -0.76
VEGFA-219ENST00000518824 CDK10Q15131 360 aa10.33□□□□□ -0.76
VEGFA-219ENST00000518824 RNASE12Q5GAN4 147 aaKnown RBP10.33□□□□□ -0.76
VEGFA-219ENST00000518824 C10orf55Q5SWW7 151 aa10.33□□□□□ -0.76
VEGFA-219ENST00000518824 GPR141Q7Z602 305 aa10.33□□□□□ -0.76
VEGFA-219ENST00000518824 LYSMD2Q8IV50 215 aa10.33□□□□□ -0.76
VEGFA-219ENST00000518824 MFSD4AQ8N468 514 aa10.33□□□□□ -0.76
VEGFA-219ENST00000518824 GPX8Q8TED1 209 aa10.33□□□□□ -0.76
VEGFA-219ENST00000518824 C4orf3Q8WVX3 66 aa10.33□□□□□ -0.76
VEGFA-219ENST00000518824 ADTRPQ96IZ2 230 aa10.33□□□□□ -0.76
VEGFA-219ENST00000518824 MIXL1Q9H2W2 232 aa10.33□□□□□ -0.76
VEGFA-219ENST00000518824 IFT46Q9NQC8 304 aa10.33□□□□□ -0.76
VEGFA-219ENST00000518824 NECAP2Q9NVZ3 263 aa10.33□□□□□ -0.76
VEGFA-219ENST00000518824 AURKAIP1Q9NWT8 199 aaPredicted RBP10.33□□□□□ -0.76
VEGFA-219ENST00000518824 FOXA2Q9Y261 457 aaPredicted RBP10.33□□□□□ -0.76
VEGFA-219ENST00000518824 RAMP3O60896 148 aa10.32□□□□□ -0.76
VEGFA-219ENST00000518824 APOA1P02647 267 aa10.32□□□□□ -0.76
VEGFA-219ENST00000518824 RRASP10301 218 aa10.32□□□□□ -0.76
VEGFA-219ENST00000518824 NAT1P18440 290 aa10.32□□□□□ -0.76
VEGFA-219ENST00000518824 HLA-DMAP28067 261 aa10.32□□□□□ -0.76
VEGFA-219ENST00000518824 PRSS3P35030 304 aa10.32□□□□□ -0.76
VEGFA-219ENST00000518824 CBX5P45973 191 aa10.32□□□□□ -0.76
VEGFA-219ENST00000518824 ACTBL2Q562R1 376 aa10.32□□□□□ -0.76
VEGFA-219ENST00000518824 TMEM65Q6PI78 240 aa10.32□□□□□ -0.76
VEGFA-219ENST00000518824 OVCH2Q7RTZ1 564 aa10.32□□□□□ -0.76
VEGFA-219ENST00000518824 TMEM17Q86X19 198 aa10.32□□□□□ -0.76
VEGFA-219ENST00000518824 CLVS1Q8IUQ0 354 aaPredicted RBP10.32□□□□□ -0.76
VEGFA-219ENST00000518824 OR5T1Q8NG75 326 aa10.32□□□□□ -0.76
VEGFA-219ENST00000518824 OR11H1Q8NG94 326 aa10.32□□□□□ -0.76
VEGFA-219ENST00000518824 TCTEX1D2Q8WW35 142 aa10.32□□□□□ -0.76
VEGFA-219ENST00000518824 GIMAP1Q8WWP7 306 aa10.32□□□□□ -0.76
VEGFA-219ENST00000518824 DCUN1D5Q9BTE7 237 aa10.32□□□□□ -0.76
VEGFA-219ENST00000518824 SLC5A7Q9GZV3 580 aa10.32□□□□□ -0.76
VEGFA-219ENST00000518824 EHFQ9NZC4 300 aa10.32□□□□□ -0.76
VEGFA-219ENST00000518824 RBMXL2O75526 392 aaKnown RBP10.31□□□□□ -0.76
VEGFA-219ENST00000518824 CNIH1O95406 144 aa10.31□□□□□ -0.76
VEGFA-219ENST00000518824 IGHV3-11P01762 117 aa10.31□□□□□ -0.76
VEGFA-219ENST00000518824 MYOD1P15172 320 aa10.31□□□□□ -0.76
VEGFA-219ENST00000518824 ZNF182P17025 639 aaPredicted RBP10.31□□□□□ -0.76
VEGFA-219ENST00000518824 UBE2KP61086 200 aa10.31□□□□□ -0.76
VEGFA-219ENST00000518824 PRSS8Q16651 343 aa10.31□□□□□ -0.76
VEGFA-219ENST00000518824 AKIRIN2Q53H80 203 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms