RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 PTTG1O95997 202 aa-2.87□□□□□ -2.87
RNU6-542P-201ENST00000516405 CTSDP07339 412 aaPredicted RBP-2.87□□□□□ -2.87
RNU6-542P-201ENST00000516405 NMBP08949 121 aa-2.87□□□□□ -2.87
RNU6-542P-201ENST00000516405 TFPTP0C1Z6 253 aa-2.87□□□□□ -2.87
RNU6-542P-201ENST00000516405 CCDC192P0DO97 292 aa-2.87□□□□□ -2.87
RNU6-542P-201ENST00000516405 MIFP14174 115 aa-2.87□□□□□ -2.87
RNU6-542P-201ENST00000516405 CAV3P56539 151 aa-2.87□□□□□ -2.87
RNU6-542P-201ENST00000516405 RAB2AP61019 212 aa-2.87□□□□□ -2.87
RNU6-542P-201ENST00000516405 CBX1P83916 185 aa-2.87□□□□□ -2.87
RNU6-542P-201ENST00000516405 GNA12Q03113 381 aa-2.87□□□□□ -2.87
RNU6-542P-201ENST00000516405 PDZK1IP1Q13113 114 aa-2.87□□□□□ -2.87
RNU6-542P-201ENST00000516405 DEFB113Q30KQ7 82 aa-2.87□□□□□ -2.87
RNU6-542P-201ENST00000516405 ANKDD1AQ495B1 522 aa-2.87□□□□□ -2.87
RNU6-542P-201ENST00000516405 CEP55Q53EZ4 464 aa-2.87□□□□□ -2.87
RNU6-542P-201ENST00000516405 VKORC1L1Q8N0U8 176 aa-2.87□□□□□ -2.87
RNU6-542P-201ENST00000516405 OR5L1Q8NGL2 311 aa-2.87□□□□□ -2.87
RNU6-542P-201ENST00000516405 LYPD6BQ8NI32 183 aa-2.87□□□□□ -2.87
RNU6-542P-201ENST00000516405 ING5Q8WYH8 240 aa-2.87□□□□□ -2.87
RNU6-542P-201ENST00000516405 RNASE6Q93091 150 aaKnown RBP-2.87□□□□□ -2.87
RNU6-542P-201ENST00000516405 SCGB3A2Q96PL1 93 aa-2.87□□□□□ -2.87
RNU6-542P-201ENST00000516405 AGMATQ9BSE5 352 aa-2.87□□□□□ -2.87
RNU6-542P-201ENST00000516405 CNFNQ9BYD5 112 aa-2.87□□□□□ -2.87
RNU6-542P-201ENST00000516405 CLSTN2Q9H4D0 955 aa-2.87□□□□□ -2.87
RNU6-542P-201ENST00000516405 POLR3HQ9Y535 204 aaPredicted RBP-2.87□□□□□ -2.87
RNU6-542P-201ENST00000516405 SMCO2A6NFE2 343 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 HMGB1P1B2RPK0 211 aaPredicted RBP-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 B4DEV8 164 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 AIM2O14862 343 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 TOX3O15405 576 aaPredicted RBP-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 TSPAN12O95859 305 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 KLK1P06870 262 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 FBP1P09467 338 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 CALCBP10092 127 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 PSMA1P25786 263 aaKnown RBP-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 IVDP26440 423 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 SLC1A1P43005 524 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 FXYD2P54710 66 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 RPL18AQ02543 176 aaKnown RBP-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 RPA4Q13156 261 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 RCN1Q15293 331 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 C11orf88Q6PI97 169 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 LCN15Q6UWW0 184 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 NDUFAF7Q7L592 441 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 AAED1Q7RTV5 226 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 DAND5Q8N907 189 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 FBXO36Q8NEA4 188 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 OR9G4Q8NGQ1 327 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 TMEM239Q8WW34 195 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 ACOT12Q8WYK0 555 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 RCN3Q96D15 328 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 RILPQ96NA2 401 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 TRNT1Q96Q11 434 aaKnown RBP-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 CHP1Q99653 195 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 PRR15LQ9BU68 103 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 HINT2Q9BX68 163 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 SHCBP1LQ9BZQ2 653 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 LIN28AQ9H9Z2 209 aaKnown RBP-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 NMRK1Q9NWW6 199 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 TAS2R7Q9NYW3 318 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 MIA2Q96PC5 1412 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 CFAP46Q8IYW2 2715 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 SBF1O95248 1867 aa-2.88□□□□□ -2.87
RNU6-542P-201ENST00000516405 TRAV26-1A0A087WT03 109 aa-2.89□□□□□ -2.87
RNU6-542P-201ENST00000516405 PRORSD1PA6NEY8 169 aa-2.89□□□□□ -2.87
RNU6-542P-201ENST00000516405 SNTNA6NMZ2 147 aa-2.89□□□□□ -2.87
RNU6-542P-201ENST00000516405 F8WDY8 70 aa-2.89□□□□□ -2.87
RNU6-542P-201ENST00000516405 H7BYZ3 331 aa-2.89□□□□□ -2.87
RNU6-542P-201ENST00000516405 H7C0C1 242 aa-2.89□□□□□ -2.87
RNU6-542P-201ENST00000516405 CD160O95971 181 aa-2.89□□□□□ -2.87
RNU6-542P-201ENST00000516405 ATP5OP48047 213 aa-2.89□□□□□ -2.87
RNU6-542P-201ENST00000516405 RAB25P57735 213 aa-2.89□□□□□ -2.87
RNU6-542P-201ENST00000516405 TAS2R45P59539 299 aa-2.89□□□□□ -2.87
RNU6-542P-201ENST00000516405 RHOAP61586 193 aa-2.89□□□□□ -2.87
RNU6-542P-201ENST00000516405 SELENBP1Q13228 472 aa-2.89□□□□□ -2.87
RNU6-542P-201ENST00000516405 OR4D1Q15615 310 aa-2.89□□□□□ -2.87
RNU6-542P-201ENST00000516405 MAPK14Q16539 360 aa-2.89□□□□□ -2.87
RNU6-542P-201ENST00000516405 ARHGAP31Q2M1Z3 1444 aa-2.89□□□□□ -2.87
RNU6-542P-201ENST00000516405 PACRGLQ8N7B6 248 aa-2.89□□□□□ -2.87
RNU6-542P-201ENST00000516405 ST6GALNAC3Q8NDV1 305 aa-2.89□□□□□ -2.87
RNU6-542P-201ENST00000516405 AKR7LQ8NHP1 331 aa-2.89□□□□□ -2.87
RNU6-542P-201ENST00000516405 PIH1D2Q8WWB5 315 aa-2.89□□□□□ -2.87
RNU6-542P-201ENST00000516405 C16orf45Q96MC5 204 aaPredicted RBP-2.89□□□□□ -2.87
RNU6-542P-201ENST00000516405 LINC00052Q96N35 136 aa-2.89□□□□□ -2.87
RNU6-542P-201ENST00000516405 OR2AG1Q9H205 316 aa-2.89□□□□□ -2.87
RNU6-542P-201ENST00000516405 HES4Q9HCC6 221 aa-2.89□□□□□ -2.87
RNU6-542P-201ENST00000516405 TIMM22Q9Y584 194 aa-2.89□□□□□ -2.87
RNU6-542P-201ENST00000516405 C5orf42Q9H799 3197 aa-2.9□□□□□ -2.87
RNU6-542P-201ENST00000516405 IGHV2OR16-5A0A0B4J2B6 119 aa-2.9□□□□□ -2.87
RNU6-542P-201ENST00000516405 BCKDKO14874 412 aa-2.9□□□□□ -2.87
RNU6-542P-201ENST00000516405 UBL3O95164 117 aa-2.9□□□□□ -2.87
RNU6-542P-201ENST00000516405 MSMBP08118 114 aa-2.9□□□□□ -2.87
RNU6-542P-201ENST00000516405 MSNP26038 577 aaKnown RBP-2.9□□□□□ -2.87
RNU6-542P-201ENST00000516405 CRYBB2P43320 205 aa-2.9□□□□□ -2.87
RNU6-542P-201ENST00000516405 MP68P56378 58 aa-2.9□□□□□ -2.87
RNU6-542P-201ENST00000516405 FXYD7P58549 80 aa-2.9□□□□□ -2.87
RNU6-542P-201ENST00000516405 GABARAPL2P60520 117 aa-2.9□□□□□ -2.87
RNU6-542P-201ENST00000516405 BTN3A2P78410 334 aa-2.9□□□□□ -2.87
RNU6-542P-201ENST00000516405 ALKBH6Q3KRA9 238 aa-2.9□□□□□ -2.87
RNU6-542P-201ENST00000516405 RNASE10Q5GAN6 216 aaKnown RBP-2.9□□□□□ -2.87
RNU6-542P-201ENST00000516405 CASC2Q6XLA1 102 aa-2.9□□□□□ -2.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms