RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 CEPT1Q9Y6K0 416 aa11.39□□□□□ -0.59
DDR1-278ENST00000515233 A0A0B4J203 849 aa11.38□□□□□ -0.59
DDR1-278ENST00000515233 PTGES3LE9PB15 166 aa11.38□□□□□ -0.59
DDR1-278ENST00000515233 EBAG9O00559 213 aa11.38□□□□□ -0.59
DDR1-278ENST00000515233 FABP7O15540 132 aa11.38□□□□□ -0.59
DDR1-278ENST00000515233 RBMXL2O75526 392 aaKnown RBP11.38□□□□□ -0.59
DDR1-278ENST00000515233 JTBO76095 146 aa11.38□□□□□ -0.59
DDR1-278ENST00000515233 CD3GP09693 182 aa11.38□□□□□ -0.59
DDR1-278ENST00000515233 OR9G9P0C7N8 305 aa11.38□□□□□ -0.59
DDR1-278ENST00000515233 TRAM1Q15629 374 aa11.38□□□□□ -0.59
DDR1-278ENST00000515233 RAB11BQ15907 218 aa11.38□□□□□ -0.59
DDR1-278ENST00000515233 C2orf76Q3KRA6 126 aa11.38□□□□□ -0.59
DDR1-278ENST00000515233 IGSF11Q5DX21 431 aa11.38□□□□□ -0.59
DDR1-278ENST00000515233 OGFRL1Q5TC84 451 aaPredicted RBP11.38□□□□□ -0.59
DDR1-278ENST00000515233 LIPKQ5VXJ0 399 aa11.38□□□□□ -0.59
DDR1-278ENST00000515233 OR10J5Q8NHC4 309 aa11.38□□□□□ -0.59
DDR1-278ENST00000515233 UFD1Q92890 307 aa11.38□□□□□ -0.59
DDR1-278ENST00000515233 PHB2Q99623 299 aa11.38□□□□□ -0.59
DDR1-278ENST00000515233 KCNK7Q9Y2U2 307 aa11.38□□□□□ -0.59
DDR1-278ENST00000515233 TRBV9A0A0B4J1U6 114 aa11.37□□□□□ -0.59
DDR1-278ENST00000515233 ZNF785A8K8V0 405 aa11.37□□□□□ -0.59
DDR1-278ENST00000515233 BET1O15155 118 aa11.37□□□□□ -0.59
DDR1-278ENST00000515233 DENRO43583 198 aaKnown RBP11.37□□□□□ -0.59
DDR1-278ENST00000515233 ARL6IP5O75915 188 aa11.37□□□□□ -0.59
DDR1-278ENST00000515233 GSTT2P0CG29 244 aa11.37□□□□□ -0.59
DDR1-278ENST00000515233 GSTT2BP0CG30 244 aa11.37□□□□□ -0.59
DDR1-278ENST00000515233 UBE2KP61086 200 aa11.37□□□□□ -0.59
DDR1-278ENST00000515233 TPBGQ13641 420 aa11.37□□□□□ -0.59
DDR1-278ENST00000515233 IRF3Q14653 427 aa11.37□□□□□ -0.59
DDR1-278ENST00000515233 PRSS8Q16651 343 aa11.37□□□□□ -0.59
DDR1-278ENST00000515233 RTL8BQ17RB0 113 aa11.37□□□□□ -0.59
DDR1-278ENST00000515233 SRSF12Q8WXF0 261 aaKnown RBP11.37□□□□□ -0.59
DDR1-278ENST00000515233 DDB2Q92466 427 aa11.37□□□□□ -0.59
DDR1-278ENST00000515233 TMEM203Q969S6 136 aa11.37□□□□□ -0.59
DDR1-278ENST00000515233 FAM3DQ96BQ1 224 aa11.37□□□□□ -0.59
DDR1-278ENST00000515233 C5orf30Q96GV9 206 aa11.37□□□□□ -0.59
DDR1-278ENST00000515233 FAM223BA6NKX1 122 aa11.36□□□□□ -0.59
DDR1-278ENST00000515233 BMPR1BO00238 502 aa11.36□□□□□ -0.59
DDR1-278ENST00000515233 CASQ2O14958 399 aaPredicted RBP11.36□□□□□ -0.59
DDR1-278ENST00000515233 FCGR3AP08637 254 aa11.36□□□□□ -0.59
DDR1-278ENST00000515233 PSMA1P25786 263 aaKnown RBP11.36□□□□□ -0.59
DDR1-278ENST00000515233 PSMD7P51665 324 aa11.36□□□□□ -0.59
DDR1-278ENST00000515233 CLDN12P56749 244 aa11.36□□□□□ -0.59
DDR1-278ENST00000515233 MRPS15P82914 257 aaKnown RBP11.36□□□□□ -0.59
DDR1-278ENST00000515233 TNXAQ16473 311 aa11.36□□□□□ -0.59
DDR1-278ENST00000515233 VMA21Q3ZAQ7 101 aa11.36□□□□□ -0.59
DDR1-278ENST00000515233 FAM223AQ8IWN6 122 aa11.36□□□□□ -0.59
DDR1-278ENST00000515233 KCTD12Q96CX2 325 aaKnown RBP11.36□□□□□ -0.59
DDR1-278ENST00000515233 ADTRPQ96IZ2 230 aa11.36□□□□□ -0.59
DDR1-278ENST00000515233 NEURL2Q9BR09 285 aa11.36□□□□□ -0.59
DDR1-278ENST00000515233 CENPOQ9BU64 300 aa11.36□□□□□ -0.59
DDR1-278ENST00000515233 PLEKHA3Q9HB20 300 aa11.36□□□□□ -0.59
DDR1-278ENST00000515233 AKIP1Q9NQ31 210 aa11.36□□□□□ -0.59
DDR1-278ENST00000515233 SLC2A8Q9NY64 477 aa11.36□□□□□ -0.59
DDR1-278ENST00000515233 SCN3BQ9NY72 215 aa11.36□□□□□ -0.59
DDR1-278ENST00000515233 ZNF230Q9UIE0 474 aaPredicted RBP11.36□□□□□ -0.59
DDR1-278ENST00000515233 RAB22AQ9UL26 194 aa11.36□□□□□ -0.59
DDR1-278ENST00000515233 V9GY05 133 aa11.36□□□□□ -0.59
DDR1-278ENST00000515233 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.35□□□□□ -0.59
DDR1-278ENST00000515233 ERICH4A6NGS2 130 aa11.35□□□□□ -0.59
DDR1-278ENST00000515233 TPPPO94811 219 aa11.35□□□□□ -0.59
DDR1-278ENST00000515233 APELAP0DMC3 54 aa11.35□□□□□ -0.59
DDR1-278ENST00000515233 DUTP33316 252 aaKnown RBP11.35□□□□□ -0.59
DDR1-278ENST00000515233 CD81P60033 236 aa11.35□□□□□ -0.59
DDR1-278ENST00000515233 RHOGP84095 191 aa11.35□□□□□ -0.59
DDR1-278ENST00000515233 ATP5G2Q06055 141 aa11.35□□□□□ -0.59
DDR1-278ENST00000515233 RCN1Q15293 331 aa11.35□□□□□ -0.59
DDR1-278ENST00000515233 CD300EQ496F6 205 aaPredicted RBP11.35□□□□□ -0.59
DDR1-278ENST00000515233 FAM209BQ5JX69 171 aa11.35□□□□□ -0.59
DDR1-278ENST00000515233 TTC9CQ8N5M4 171 aa11.35□□□□□ -0.59
DDR1-278ENST00000515233 OSR1Q8TAX0 266 aaPredicted RBP11.35□□□□□ -0.59
DDR1-278ENST00000515233 RAB3CQ96E17 227 aa11.35□□□□□ -0.59
DDR1-278ENST00000515233 RETNQ9HD89 108 aa11.35□□□□□ -0.59
DDR1-278ENST00000515233 RBM7Q9Y580 266 aaKnown RBP11.35□□□□□ -0.59
DDR1-278ENST00000515233 TMEM272A0A1B0GTI8 110 aa11.34□□□□□ -0.59
DDR1-278ENST00000515233 LINC00473A8K010 186 aa11.34□□□□□ -0.59
DDR1-278ENST00000515233 CD7P09564 240 aa11.34□□□□□ -0.59
DDR1-278ENST00000515233 KIR2DS2P43631 304 aa11.34□□□□□ -0.59
DDR1-278ENST00000515233 RPS25P62851 125 aaKnown RBP11.34□□□□□ -0.59
DDR1-278ENST00000515233 ZNF45Q02386 682 aa11.34□□□□□ -0.59
DDR1-278ENST00000515233 PLA2G7Q13093 441 aa11.34□□□□□ -0.59
DDR1-278ENST00000515233 DEFB114Q30KQ6 69 aa11.34□□□□□ -0.59
DDR1-278ENST00000515233 NECAP1Q8NC96 275 aa11.34□□□□□ -0.59
DDR1-278ENST00000515233 SPIN2AQ99865 258 aa11.34□□□□□ -0.59
DDR1-278ENST00000515233 SPIN2BQ9BPZ2 258 aa11.34□□□□□ -0.59
DDR1-278ENST00000515233 ZC4H2Q9NQZ6 224 aa11.34□□□□□ -0.59
DDR1-278ENST00000515233 DMRT1Q9Y5R6 373 aa11.34□□□□□ -0.59
DDR1-278ENST00000515233 RBMY1BA6NDE4 496 aaKnown RBP11.33□□□□□ -0.6
DDR1-278ENST00000515233 RBMY1EA6NEQ0 496 aaKnown RBP11.33□□□□□ -0.6
DDR1-278ENST00000515233 MPPED1O15442 326 aa11.33□□□□□ -0.6
DDR1-278ENST00000515233 CREBL2O60519 120 aaPredicted RBP11.33□□□□□ -0.6
DDR1-278ENST00000515233 TUSC2O75896 110 aa11.33□□□□□ -0.6
DDR1-278ENST00000515233 CRYZL1O95825 349 aa11.33□□□□□ -0.6
DDR1-278ENST00000515233 RBMY1DP0C7P1 496 aaKnown RBP11.33□□□□□ -0.6
DDR1-278ENST00000515233 CALRP27797 417 aaKnown RBP11.33□□□□□ -0.6
DDR1-278ENST00000515233 EXOSC2Q13868 293 aaKnown RBP11.33□□□□□ -0.6
DDR1-278ENST00000515233 CDK10Q15131 360 aa11.33□□□□□ -0.6
DDR1-278ENST00000515233 IDO2Q6ZQW0 420 aa11.33□□□□□ -0.6
DDR1-278ENST00000515233 Q6ZS49 121 aa11.33□□□□□ -0.6
DDR1-278ENST00000515233 DEFB125Q8N687 156 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms