RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 SRRM4A7MD48 611 aaKnown RBP8.62□□□□□ -1.03
UBE2D3-232ENST00000514755 G3V4G9 280 aa8.62□□□□□ -1.03
UBE2D3-232ENST00000514755 PAX4O43316 350 aa8.62□□□□□ -1.03
UBE2D3-232ENST00000514755 TUSC2O75896 110 aa8.62□□□□□ -1.03
UBE2D3-232ENST00000514755 IGLV2-23P01705 113 aa8.62□□□□□ -1.03
UBE2D3-232ENST00000514755 CTXN2P0C2S0 81 aa8.62□□□□□ -1.03
UBE2D3-232ENST00000514755 ELK1P19419 428 aa8.62□□□□□ -1.03
UBE2D3-232ENST00000514755 PPIFP30405 207 aaKnown RBP8.62□□□□□ -1.03
UBE2D3-232ENST00000514755 RORCP51449 518 aa8.62□□□□□ -1.03
UBE2D3-232ENST00000514755 LUMP51884 338 aaPredicted RBP8.62□□□□□ -1.03
UBE2D3-232ENST00000514755 RPS16P62249 146 aaKnown RBP8.62□□□□□ -1.03
UBE2D3-232ENST00000514755 RPL23AP62750 156 aaKnown RBP8.62□□□□□ -1.03
UBE2D3-232ENST00000514755 RPL30P62888 115 aaKnown RBP8.62□□□□□ -1.03
UBE2D3-232ENST00000514755 SLC35B1P78383 322 aa8.62□□□□□ -1.03
UBE2D3-232ENST00000514755 TMEM69Q5SWH9 247 aa8.62□□□□□ -1.03
UBE2D3-232ENST00000514755 PDPNQ86YL7 162 aa8.62□□□□□ -1.03
UBE2D3-232ENST00000514755 ZNF645Q8N7E2 425 aa8.62□□□□□ -1.03
UBE2D3-232ENST00000514755 OR4F17Q8NGA8 305 aa8.62□□□□□ -1.03
UBE2D3-232ENST00000514755 FLYWCH2Q96CP2 140 aaKnown RBP8.62□□□□□ -1.03
UBE2D3-232ENST00000514755 OR4F4Q96R69 305 aa8.62□□□□□ -1.03
UBE2D3-232ENST00000514755 GPHA2Q96T91 129 aa8.62□□□□□ -1.03
UBE2D3-232ENST00000514755 FAM103A1Q9BTL3 118 aaKnown RBP8.62□□□□□ -1.03
UBE2D3-232ENST00000514755 OR51J1Q9H342 316 aa8.62□□□□□ -1.03
UBE2D3-232ENST00000514755 PARP11Q9NR21 331 aa8.62□□□□□ -1.03
UBE2D3-232ENST00000514755 METTL1Q9UBP6 276 aaKnown RBP8.62□□□□□ -1.03
UBE2D3-232ENST00000514755 RBBP9O75884 186 aa8.61□□□□□ -1.03
UBE2D3-232ENST00000514755 CA2P00918 260 aa8.61□□□□□ -1.03
UBE2D3-232ENST00000514755 APOA2P02652 100 aa8.61□□□□□ -1.03
UBE2D3-232ENST00000514755 CRYGBP07316 175 aa8.61□□□□□ -1.03
UBE2D3-232ENST00000514755 PF4V1P10720 104 aa8.61□□□□□ -1.03
UBE2D3-232ENST00000514755 EGR2P11161 476 aaPredicted RBP8.61□□□□□ -1.03
UBE2D3-232ENST00000514755 AADACP22760 399 aa8.61□□□□□ -1.03
UBE2D3-232ENST00000514755 FCGR2CP31995 323 aa8.61□□□□□ -1.03
UBE2D3-232ENST00000514755 THBS3P49746 956 aa8.61□□□□□ -1.03
UBE2D3-232ENST00000514755 ARPC4P59998 168 aa8.61□□□□□ -1.03
UBE2D3-232ENST00000514755 CX3CL1P78423 397 aa8.61□□□□□ -1.03
UBE2D3-232ENST00000514755 SSBP2P81877 361 aaPredicted RBP8.61□□□□□ -1.03
UBE2D3-232ENST00000514755 DEFA6Q01524 100 aa8.61□□□□□ -1.03
UBE2D3-232ENST00000514755 EIF4EBP1Q13541 118 aaPredicted RBP8.61□□□□□ -1.03
UBE2D3-232ENST00000514755 PLGLAQ15195 96 aa8.61□□□□□ -1.03
UBE2D3-232ENST00000514755 MRGPRG-AS1Q2M3A8 158 aa8.61□□□□□ -1.03
UBE2D3-232ENST00000514755 TEX38Q6PEX7 206 aa8.61□□□□□ -1.03
UBE2D3-232ENST00000514755 ETV3LQ6ZN32 361 aa8.61□□□□□ -1.03
UBE2D3-232ENST00000514755 CLVS1Q8IUQ0 354 aaPredicted RBP8.61□□□□□ -1.03
UBE2D3-232ENST00000514755 RNF5Q99942 180 aa8.61□□□□□ -1.03
UBE2D3-232ENST00000514755 ANAPC10Q9UM13 185 aa8.61□□□□□ -1.03
UBE2D3-232ENST00000514755 ARPC1BO15143 372 aaKnown RBP8.6□□□□□ -1.03
UBE2D3-232ENST00000514755 SLC25A17O43808 307 aa8.6□□□□□ -1.03
UBE2D3-232ENST00000514755 SOX15O60248 233 aa8.6□□□□□ -1.03
UBE2D3-232ENST00000514755 IGHG4P01861 327 aa8.6□□□□□ -1.03
UBE2D3-232ENST00000514755 APOA1P02647 267 aa8.6□□□□□ -1.03
UBE2D3-232ENST00000514755 VDAC1P21796 283 aa8.6□□□□□ -1.03
UBE2D3-232ENST00000514755 PSMB8P28062 276 aa8.6□□□□□ -1.03
UBE2D3-232ENST00000514755 BRWD1-AS2P59051 145 aa8.6□□□□□ -1.03
UBE2D3-232ENST00000514755 SRSF3P84103 164 aaKnown RBP8.6□□□□□ -1.03
UBE2D3-232ENST00000514755 PJVKQ0ZLH3 352 aa8.6□□□□□ -1.03
UBE2D3-232ENST00000514755 ECSCRQ19T08 205 aa8.6□□□□□ -1.03
UBE2D3-232ENST00000514755 TMEM177Q53S58 311 aa8.6□□□□□ -1.03
UBE2D3-232ENST00000514755 C19orf54Q5BKX5 351 aa8.6□□□□□ -1.03
UBE2D3-232ENST00000514755 OR2B11Q5JQS5 317 aa8.6□□□□□ -1.03
UBE2D3-232ENST00000514755 OR5AP2Q8NGF4 316 aa8.6□□□□□ -1.03
UBE2D3-232ENST00000514755 CASTOR1Q8WTX7 329 aa8.6□□□□□ -1.03
UBE2D3-232ENST00000514755 ACOT12Q8WYK0 555 aa8.6□□□□□ -1.03
UBE2D3-232ENST00000514755 HARBI1Q96MB7 349 aa8.6□□□□□ -1.03
UBE2D3-232ENST00000514755 CMTM3Q96MX0 182 aa8.6□□□□□ -1.03
UBE2D3-232ENST00000514755 DUX3Q96PT4 197 aa8.6□□□□□ -1.03
UBE2D3-232ENST00000514755 KLK15Q9H2R5 256 aa8.6□□□□□ -1.03
UBE2D3-232ENST00000514755 CCL28Q9NRJ3 127 aa8.6□□□□□ -1.03
UBE2D3-232ENST00000514755 ZNF580Q9UK33 172 aa8.6□□□□□ -1.03
UBE2D3-232ENST00000514755 MRPS7Q9Y2R9 242 aaKnown RBP8.6□□□□□ -1.03
UBE2D3-232ENST00000514755 RBMX2Q9Y388 322 aaKnown RBP8.6□□□□□ -1.03
UBE2D3-232ENST00000514755 A3GALT2U3KPV4 340 aa8.6□□□□□ -1.03
UBE2D3-232ENST00000514755 TRAV41A0A0B4J266 112 aa8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 TNFSF12O43508 249 aa8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 SPDEFO95238 335 aa8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 CRYZL1O95825 349 aa8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 PPYP01298 95 aa8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 PMP2P02689 132 aa8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 OR5H8P0DN80 308 aa8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 ZNF182P17025 639 aaPredicted RBP8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 PRSS3P35030 304 aa8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 CBX5P45973 191 aa8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 RFX2P48378 723 aa8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 FXYD4P59646 89 aa8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 KIAA0141Q14154 515 aaPredicted RBP8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 CDK10Q15131 360 aa8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 DEFB136Q30KP8 78 aa8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 ZNF660Q6AZW8 331 aaPredicted RBP8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 SNX29P2Q8IUI4 249 aa8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 COMMD1Q8N668 190 aa8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 RNF152Q8N8N0 203 aa8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 KLHL30-AS1Q8NEE0 82 aa8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 GPX8Q8TED1 209 aa8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 SECTM1Q8WVN6 248 aa8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 TSNAXQ99598 290 aaKnown RBP8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 MIXL1Q9H2W2 232 aa8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 IFT46Q9NQC8 304 aa8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 NECAP2Q9NVZ3 263 aa8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 TAS2R8Q9NYW2 309 aa8.59□□□□□ -1.03
UBE2D3-232ENST00000514755 NUBP2Q9Y5Y2 271 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms