RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 ZNF57Q68EA5 555 aaPredicted RBP7.8□□□□□ -1.16
TOPBP1-209ENST00000513818 HIST2H2BDQ6DRA6 164 aa7.8□□□□□ -1.16
TOPBP1-209ENST00000513818 DHRS11Q6UWP2 260 aa7.8□□□□□ -1.16
TOPBP1-209ENST00000513818 LHFPL1Q86WI0 220 aa7.8□□□□□ -1.16
TOPBP1-209ENST00000513818 C5orf56Q8N8D9 126 aa7.8□□□□□ -1.16
TOPBP1-209ENST00000513818 ZBTB34Q8NCN2 500 aa7.8□□□□□ -1.16
TOPBP1-209ENST00000513818 OR5AN1Q8NGI8 311 aa7.8□□□□□ -1.16
TOPBP1-209ENST00000513818 OR51S1Q8NGJ8 323 aa7.8□□□□□ -1.16
TOPBP1-209ENST00000513818 DDB2Q92466 427 aa7.8□□□□□ -1.16
TOPBP1-209ENST00000513818 ZNF702PQ9H963 129 aa7.8□□□□□ -1.16
TOPBP1-209ENST00000513818 TPSG1Q9NRR2 321 aa7.8□□□□□ -1.16
TOPBP1-209ENST00000513818 MCUBQ9NWR8 336 aa7.8□□□□□ -1.16
TOPBP1-209ENST00000513818 DISC1C4P0D8 188 aa7.79□□□□□ -1.16
TOPBP1-209ENST00000513818 CRYZL1O95825 349 aa7.79□□□□□ -1.16
TOPBP1-209ENST00000513818 IL7P13232 177 aa7.79□□□□□ -1.16
TOPBP1-209ENST00000513818 TBPP20226 339 aa7.79□□□□□ -1.16
TOPBP1-209ENST00000513818 PTBP1P26599 531 aaKnown RBP eCLIP7.79□□□□□ -1.161e-8■■□□□ 14.1
TOPBP1-209ENST00000513818 INPP1P49441 399 aa7.79□□□□□ -1.16
TOPBP1-209ENST00000513818 EBI3Q14213 229 aa7.79□□□□□ -1.16
TOPBP1-209ENST00000513818 MEF2DQ14814 521 aa7.79□□□□□ -1.16
TOPBP1-209ENST00000513818 TOMM5Q8N4H5 51 aa7.79□□□□□ -1.16
TOPBP1-209ENST00000513818 ARRDC1Q8N5I2 433 aa7.79□□□□□ -1.16
TOPBP1-209ENST00000513818 GDPD1Q8N9F7 314 aa7.79□□□□□ -1.16
TOPBP1-209ENST00000513818 Q8N9W7 124 aa7.79□□□□□ -1.16
TOPBP1-209ENST00000513818 OR4C13Q8NGP0 309 aa7.79□□□□□ -1.16
TOPBP1-209ENST00000513818 OR13C8Q8NGS7 320 aa7.79□□□□□ -1.16
TOPBP1-209ENST00000513818 MARCH1Q8TCQ1 289 aa7.79□□□□□ -1.16
TOPBP1-209ENST00000513818 ZFAND2BQ8WV99 257 aa7.79□□□□□ -1.16
TOPBP1-209ENST00000513818 TMEM158Q8WZ71 300 aa7.79□□□□□ -1.16
TOPBP1-209ENST00000513818 HARBI1Q96MB7 349 aa7.79□□□□□ -1.16
TOPBP1-209ENST00000513818 NPFFR1Q9GZQ6 430 aa7.79□□□□□ -1.16
TOPBP1-209ENST00000513818 GHITMQ9H3K2 345 aa7.79□□□□□ -1.16
TOPBP1-209ENST00000513818 FBXL15Q9H469 300 aa7.79□□□□□ -1.16
TOPBP1-209ENST00000513818 HRASLSQ9HDD0 168 aa7.79□□□□□ -1.16
TOPBP1-209ENST00000513818 PLSCR3Q9NRY6 295 aa7.79□□□□□ -1.16
TOPBP1-209ENST00000513818 GAB2Q9UQC2 676 aa7.79□□□□□ -1.16
TOPBP1-209ENST00000513818 TENM1Q9UKZ4 2725 aa7.79□□□□□ -1.16
TOPBP1-209ENST00000513818 GPR31O00270 319 aa7.78□□□□□ -1.16
TOPBP1-209ENST00000513818 NBR2O15453 112 aa7.78□□□□□ -1.16
TOPBP1-209ENST00000513818 SLC25A17O43808 307 aa7.78□□□□□ -1.16
TOPBP1-209ENST00000513818 RAMP3O60896 148 aa7.78□□□□□ -1.16
TOPBP1-209ENST00000513818 CD40LGP29965 261 aa7.78□□□□□ -1.16
TOPBP1-209ENST00000513818 BRWD1-AS2P59051 145 aa7.78□□□□□ -1.16
TOPBP1-209ENST00000513818 RPS16P62249 146 aaKnown RBP7.78□□□□□ -1.16
TOPBP1-209ENST00000513818 ZNF45Q02386 682 aa7.78□□□□□ -1.16
TOPBP1-209ENST00000513818 AWAT1Q58HT5 328 aa7.78□□□□□ -1.16
TOPBP1-209ENST00000513818 C11orf88Q6PI97 169 aa7.78□□□□□ -1.16
TOPBP1-209ENST00000513818 IDO2Q6ZQW0 420 aa7.78□□□□□ -1.16
TOPBP1-209ENST00000513818 C16orf82Q7Z2V1 217 aa7.78□□□□□ -1.16
TOPBP1-209ENST00000513818 PDPNQ86YL7 162 aa7.78□□□□□ -1.16
TOPBP1-209ENST00000513818 VKORC1L1Q8N0U8 176 aa7.78□□□□□ -1.16
TOPBP1-209ENST00000513818 ADTRPQ96IZ2 230 aa7.78□□□□□ -1.16
TOPBP1-209ENST00000513818 AKR1E2Q96JD6 320 aa7.78□□□□□ -1.16
TOPBP1-209ENST00000513818 CCDC140Q96MF4 163 aa7.78□□□□□ -1.16
TOPBP1-209ENST00000513818 CLCC1Q96S66 551 aa7.78□□□□□ -1.16
TOPBP1-209ENST00000513818 HSD17B10Q99714 261 aaKnown RBP7.78□□□□□ -1.16
TOPBP1-209ENST00000513818 HSPB9Q9BQS6 159 aa7.78□□□□□ -1.16
TOPBP1-209ENST00000513818 RAB18Q9NP72 206 aa7.78□□□□□ -1.16
TOPBP1-209ENST00000513818 ZNF107Q9UII5 783 aaPredicted RBP7.78□□□□□ -1.16
TOPBP1-209ENST00000513818 LINC00527Q9UJ94 153 aa7.78□□□□□ -1.16
TOPBP1-209ENST00000513818 TMEM89A2RUT3 159 aa7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 LINC01548A6NM66 108 aa7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 SRRM4A7MD48 611 aaKnown RBP7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 RGS13O14921 159 aa7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 SHOXO15266 292 aa7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 PGLYRP1O75594 196 aaPredicted RBP7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 SLC22A5O76082 557 aa7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 S1PR2O95136 353 aa7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 NDUFA7O95182 113 aa7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 GHRHP01286 108 aa7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 RPA2P15927 270 aa7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 MC5RP33032 325 aa7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 SRSF4Q08170 494 aaKnown RBP7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 PLGLAQ15195 96 aa7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 RTL8BQ17RB0 113 aa7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 ZNF66Q6ZN08 573 aa7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 TBC1D26Q86UD7 250 aa7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 SLC38A6Q8IZM9 456 aa7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 SPAG16Q8N0X2 631 aa7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 FAM71E2Q8N5Q1 922 aa7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 OR2C3Q8N628 320 aa7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 OR4F5Q8NH21 305 aa7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 LINC01006Q8NI28 216 aa7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 FLYWCH2Q96CP2 140 aaKnown RBP7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 RCC1LQ96I51 464 aaKnown RBP7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 RANBP3Q9H6Z4 567 aaPredicted RBP7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 SLC2A9Q9NRM0 540 aa7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 METTL1Q9UBP6 276 aaKnown RBP7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 VSIG4Q9Y279 399 aa7.77□□□□□ -1.17
TOPBP1-209ENST00000513818 COL6A5A8TX70 2615 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 RRHO14718 337 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 FGF16O43320 207 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 TSPAN9O75954 239 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 NDUFA3O95167 84 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 CA2P00918 260 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 IGLV2-23P01705 113 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 VSIG10L2P0DP72 767 aa7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 FAUP35544 74 aaKnown RBP7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 VDAC2P45880 294 aaPredicted RBP7.76□□□□□ -1.17
TOPBP1-209ENST00000513818 CCR6P51684 374 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms