RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 WASHC3Q9Y3C0 194 aa10.07□□□□□ -0.8
PDPN-210ENST00000513143 MDFIC2A0A1B0GVS7 189 aa10.07□□□□□ -0.8
PDPN-210ENST00000513143 PRAF2O60831 178 aa10.07□□□□□ -0.8
PDPN-210ENST00000513143 RAMP3O60896 148 aa10.07□□□□□ -0.8
PDPN-210ENST00000513143 FCGR3BO75015 233 aa10.07□□□□□ -0.8
PDPN-210ENST00000513143 VENTXO95231 258 aa10.07□□□□□ -0.8
PDPN-210ENST00000513143 IFNA2P01563 188 aa10.07□□□□□ -0.8
PDPN-210ENST00000513143 ANXA3P12429 323 aa10.07□□□□□ -0.8
PDPN-210ENST00000513143 VAMP1P23763 118 aa10.07□□□□□ -0.8
PDPN-210ENST00000513143 UCP1P25874 307 aa10.07□□□□□ -0.8
PDPN-210ENST00000513143 DHRS2Q13268 280 aa10.07□□□□□ -0.8
PDPN-210ENST00000513143 EBI3Q14213 229 aa10.07□□□□□ -0.8
PDPN-210ENST00000513143 TMEM187Q14656 261 aa10.07□□□□□ -0.8
PDPN-210ENST00000513143 RTL8BQ17RB0 113 aa10.07□□□□□ -0.8
PDPN-210ENST00000513143 SP6Q3SY56 376 aa10.07□□□□□ -0.8
PDPN-210ENST00000513143 C4orf46Q504U0 113 aa10.07□□□□□ -0.8
PDPN-210ENST00000513143 OR2B11Q5JQS5 317 aa10.07□□□□□ -0.8
PDPN-210ENST00000513143 DHRS7BQ6IAN0 325 aaPredicted RBP10.07□□□□□ -0.8
PDPN-210ENST00000513143 Q71RC1 249 aaPredicted RBP10.07□□□□□ -0.8
PDPN-210ENST00000513143 THNSL2Q86YJ6 484 aa10.07□□□□□ -0.8
PDPN-210ENST00000513143 ZNF48Q96MX3 618 aaPredicted RBP10.07□□□□□ -0.8
PDPN-210ENST00000513143 TMEM222Q9H0R3 208 aa10.07□□□□□ -0.8
PDPN-210ENST00000513143 H7C2Y5 167 aa10.06□□□□□ -0.8
PDPN-210ENST00000513143 DUS4LO95620 317 aaKnown RBP10.06□□□□□ -0.8
PDPN-210ENST00000513143 CDS2O95674 445 aa10.06□□□□□ -0.8
PDPN-210ENST00000513143 HLA-AP01891 365 aaKnown RBP10.06□□□□□ -0.8
PDPN-210ENST00000513143 IGKV1-16P04430 117 aa10.06□□□□□ -0.8
PDPN-210ENST00000513143 FAM106CPP0CH98 169 aa10.06□□□□□ -0.8
PDPN-210ENST00000513143 CBX3Q13185 183 aa10.06□□□□□ -0.8
PDPN-210ENST00000513143 SCGB2A2Q13296 93 aa10.06□□□□□ -0.8
PDPN-210ENST00000513143 SLC9A3R2Q15599 337 aa10.06□□□□□ -0.8
PDPN-210ENST00000513143 LRRC75BQ2VPJ9 315 aa10.06□□□□□ -0.8
PDPN-210ENST00000513143 TMEM177Q53S58 311 aa10.06□□□□□ -0.8
PDPN-210ENST00000513143 Q6YL49 198 aa10.06□□□□□ -0.8
PDPN-210ENST00000513143 OR4C13Q8NGP0 309 aa10.06□□□□□ -0.8
PDPN-210ENST00000513143 OR4S2Q8NH73 311 aa10.06□□□□□ -0.8
PDPN-210ENST00000513143 PIFOQ8TCI5 191 aa10.06□□□□□ -0.8
PDPN-210ENST00000513143 ZNF431Q8TF32 576 aaPredicted RBP10.06□□□□□ -0.8
PDPN-210ENST00000513143 FLYWCH2Q96CP2 140 aaKnown RBP10.06□□□□□ -0.8
PDPN-210ENST00000513143 SSX3Q99909 188 aa10.06□□□□□ -0.8
PDPN-210ENST00000513143 SEC22CQ9BRL7 303 aa10.06□□□□□ -0.8
PDPN-210ENST00000513143 PLEKHA2Q9HB19 425 aa10.06□□□□□ -0.8
PDPN-210ENST00000513143 MTORP42345 2549 aa10.05□□□□□ -0.8
PDPN-210ENST00000513143 NSD1Q96L73 2696 aaPredicted RBP10.05□□□□□ -0.8
PDPN-210ENST00000513143 A0A0B4J293 547 aa10.05□□□□□ -0.8
PDPN-210ENST00000513143 SNRPGP15A8MWD9 76 aa10.05□□□□□ -0.8
PDPN-210ENST00000513143 INAFM1C9JVW0 142 aa10.05□□□□□ -0.8
PDPN-210ENST00000513143 CRYZL1O95825 349 aa10.05□□□□□ -0.8
PDPN-210ENST00000513143 HPRT1P00492 218 aa10.05□□□□□ -0.8
PDPN-210ENST00000513143 IGKV1D-33P01593 117 aa10.05□□□□□ -0.8
PDPN-210ENST00000513143 IGKV1-33P01594 117 aa10.05□□□□□ -0.8
PDPN-210ENST00000513143 SERPINE2P07093 398 aa10.05□□□□□ -0.8
PDPN-210ENST00000513143 SNRNP70P08621 437 aaKnown RBP10.05□□□□□ -0.8
PDPN-210ENST00000513143 RPA2P15927 270 aa10.05□□□□□ -0.8
PDPN-210ENST00000513143 SRD5A1P18405 259 aa10.05□□□□□ -0.8
PDPN-210ENST00000513143 CD24P25063 80 aa10.05□□□□□ -0.8
PDPN-210ENST00000513143 LPAR6P43657 344 aa10.05□□□□□ -0.8
PDPN-210ENST00000513143 TATDN3Q17R31 274 aa10.05□□□□□ -0.8
PDPN-210ENST00000513143 ANKRD55Q3KP44 614 aa10.05□□□□□ -0.8
PDPN-210ENST00000513143 LIAT1Q6ZQX7 453 aa10.05□□□□□ -0.8
PDPN-210ENST00000513143 OR52B4Q8NGK2 314 aa10.05□□□□□ -0.8
PDPN-210ENST00000513143 OR2T10Q8NGZ9 312 aa10.05□□□□□ -0.8
PDPN-210ENST00000513143 OSR1Q8TAX0 266 aaPredicted RBP10.05□□□□□ -0.8
PDPN-210ENST00000513143 CASTOR1Q8WTX7 329 aa10.05□□□□□ -0.8
PDPN-210ENST00000513143 MITD1Q8WV92 249 aa10.05□□□□□ -0.8
PDPN-210ENST00000513143 RBMXL1Q96E39 390 aaKnown RBP10.05□□□□□ -0.8
PDPN-210ENST00000513143 EAF1Q96JC9 268 aaPredicted RBP10.05□□□□□ -0.8
PDPN-210ENST00000513143 TMEM56Q96MV1 263 aa10.05□□□□□ -0.8
PDPN-210ENST00000513143 RNF5Q99942 180 aa10.05□□□□□ -0.8
PDPN-210ENST00000513143 GPN1Q9HCN4 374 aaPredicted RBP10.05□□□□□ -0.8
PDPN-210ENST00000513143 TMEM56-RWDD3S4R434 201 aa10.05□□□□□ -0.8
PDPN-210ENST00000513143 A0A0B4J2A0 478 aa10.04□□□□□ -0.8
PDPN-210ENST00000513143 C7orf66A4D0T2 115 aa10.04□□□□□ -0.8
PDPN-210ENST00000513143 S1PR2O95136 353 aa10.04□□□□□ -0.8
PDPN-210ENST00000513143 MOSP00540 346 aa10.04□□□□□ -0.8
PDPN-210ENST00000513143 IGKV1-39P01597 117 aa10.04□□□□□ -0.8
PDPN-210ENST00000513143 IGKV1D-39P04432 117 aa10.04□□□□□ -0.8
PDPN-210ENST00000513143 IER3P46695 156 aa10.04□□□□□ -0.8
PDPN-210ENST00000513143 LGALS7P47929 136 aa10.04□□□□□ -0.8
PDPN-210ENST00000513143 SRPXP78539 464 aa10.04□□□□□ -0.8
PDPN-210ENST00000513143 Q6ZNX1 250 aa10.04□□□□□ -0.8
PDPN-210ENST00000513143 SELENOHQ8IZQ5 122 aaKnown RBP10.04□□□□□ -0.8
PDPN-210ENST00000513143 LGI3Q8N145 548 aa10.04□□□□□ -0.8
PDPN-210ENST00000513143 Q8N6K4 173 aa10.04□□□□□ -0.8
PDPN-210ENST00000513143 LRTM2Q8N967 370 aa10.04□□□□□ -0.8
PDPN-210ENST00000513143 LHFPL5Q8TAF8 219 aa10.04□□□□□ -0.8
PDPN-210ENST00000513143 IL22RA2Q969J5 263 aa10.04□□□□□ -0.8
PDPN-210ENST00000513143 RITA1Q96K30 269 aa10.04□□□□□ -0.8
PDPN-210ENST00000513143 PRR13Q9NZ81 148 aa10.04□□□□□ -0.8
PDPN-210ENST00000513143 COMMD9Q9P000 198 aa10.04□□□□□ -0.8
PDPN-210ENST00000513143 SHPKQ9UHJ6 478 aa10.04□□□□□ -0.8
PDPN-210ENST00000513143 FN1P02751 2386 aaKnown RBP10.03□□□□□ -0.8
PDPN-210ENST00000513143 A0A0A6YYJ9 748 aa10.03□□□□□ -0.8
PDPN-210ENST00000513143 SRRM4A7MD48 611 aaKnown RBP10.03□□□□□ -0.8
PDPN-210ENST00000513143 H3BUX3 64 aa10.03□□□□□ -0.8
PDPN-210ENST00000513143 SHOXO15266 292 aa10.03□□□□□ -0.8
PDPN-210ENST00000513143 CREBL2O60519 120 aaPredicted RBP10.03□□□□□ -0.8
PDPN-210ENST00000513143 CRLF1O75462 422 aa10.03□□□□□ -0.8
PDPN-210ENST00000513143 HRASP01112 189 aa10.03□□□□□ -0.8
PDPN-210ENST00000513143 NQO2P16083 231 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms