RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 NBR2O15453 112 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 C8orf88P0DMB2 117 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 ANOS1P23352 680 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 UCP3P55916 312 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 PSG7Q13046 419 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 ZNF154Q13106 437 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 BSXQ3C1V8 233 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 LDLRAD3Q86YD5 345 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 LINC01587Q99440 93 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 LPAR5Q9H1C0 372 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 AKIRIN1Q9H9L7 192 aaPredicted RBP3.6□□□□□ -1.83
VCAN-209ENST00000513016 PLAC1Q9HBJ0 212 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 B4DEV8 164 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 J3QLI3 93 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 PGLYRP1O75594 196 aaPredicted RBP3.6□□□□□ -1.83
VCAN-209ENST00000513016 CEACAM4O75871 244 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 PRSS23O95084 383 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 SCTP09683 121 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 PMCHP20382 165 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 CIRBPQ14011 172 aaKnown RBP3.6□□□□□ -1.83
VCAN-209ENST00000513016 MOGAT2Q3SYC2 334 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 LDLRAD2Q5SZI1 272 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 CRIPAKQ8N1N5 446 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 TMEM133Q9H2Q1 129 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 FBXL15Q9H469 300 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 BEX4Q9NWD9 120 aaPredicted RBP3.6□□□□□ -1.83
VCAN-209ENST00000513016 SPRR3Q9UBC9 169 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 HSPB7Q9UBY9 170 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 HSPB8Q9UJY1 196 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 TCF19Q9Y242 345 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 TRPM6Q9BX84 2022 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 IGKV3D-15A0A087WSY6 115 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 MBD3L4A6NDZ8 208 aaPredicted RBP3.6□□□□□ -1.83
VCAN-209ENST00000513016 MBD3L3A6NE82 208 aaPredicted RBP3.6□□□□□ -1.83
VCAN-209ENST00000513016 MBD3L5A6NJ08 208 aaPredicted RBP3.6□□□□□ -1.83
VCAN-209ENST00000513016 PITX3O75364 302 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 IGKV3-15P01624 115 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 PRSS2P07478 247 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 CEBPDP49716 269 aaPredicted RBP3.6□□□□□ -1.83
VCAN-209ENST00000513016 KRTDAPP60985 99 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 SMUG1Q53HV7 270 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 MBD3L2Q8NHZ7 208 aaPredicted RBP3.6□□□□□ -1.83
VCAN-209ENST00000513016 MYO7AQ13402 2215 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 TRAV8-7A0A075B6U6 113 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 TRAV40A0A0B4J280 105 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 FAM74A7A6NL05 159 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 ERVK11-1P61568 191 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 DLK1P80370 383 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 SPAG17Q6Q759 2223 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 DLEC1Q9Y238 1755 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 HMSDA8MTL9 139 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 M0R1W7 72 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 CTSBP07858 339 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 ZP1P60852 638 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 TWIST1Q15672 202 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 SCGB1D4Q6XE38 83 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 FGFRL1Q8N441 504 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 PRSS33Q8NF86 280 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 OR5AU1Q8NGC0 362 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 TMEM167AQ8TBQ9 72 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 VPS25Q9BRG1 176 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 RCC2Q9P258 522 aaKnown RBP3.6□□□□□ -1.83
VCAN-209ENST00000513016 TNFSF18Q9UNG2 199 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 FER1L6Q2WGJ9 1857 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 TRGV2A0A075B6R0 118 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 WISP1O95388 367 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 IGHG3P01860 377 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 LYZL2Q7Z4W2 148 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 FAM216BQ8N7L0 139 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 GATAD1Q8WUU5 269 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 ALKBH7Q9BT30 221 aaPredicted RBP3.6□□□□□ -1.83
VCAN-209ENST00000513016 KLHDC2Q9Y2U9 406 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 TNFRSF18Q9Y5U5 241 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 IGHV1-18A0A0C4DH31 117 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 CRYGSP22914 178 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 PSMB2P49721 201 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 MVDP53602 400 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 DEFA6Q01524 100 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 DTX1Q86Y01 620 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 TEX45Q8NA69 505 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 ZNRF1Q8ND25 227 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 RNASEH2CQ8TDP1 164 aaKnown RBP3.6□□□□□ -1.83
VCAN-209ENST00000513016 KCNS1Q96KK3 526 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 WFIKKN1Q96NZ8 548 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 MAP1LC3CQ9BXW4 147 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 RBKSQ9H477 322 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 GSX1Q9H4S2 264 aaPredicted RBP3.6□□□□□ -1.83
VCAN-209ENST00000513016 PARD6AQ9NPB6 346 aa3.6□□□□□ -1.83
VCAN-209ENST00000513016 FOXA2Q9Y261 457 aaPredicted RBP3.6□□□□□ -1.83
VCAN-209ENST00000513016 IGKV1D-42A0A075B6H8 117 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 RBFOX3A6NFN3 312 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 CDRT15L2A8MXV6 281 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 C1QTNF9BB2RNN3 333 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 ZNF324O75467 553 aaPredicted RBP3.59□□□□□ -1.83
VCAN-209ENST00000513016 GHRHP01286 108 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 C1QTNF9P0C862 333 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 GZMMP51124 257 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 Q5PR19 223 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 Q96M66 194 aa3.59□□□□□ -1.83
VCAN-209ENST00000513016 RNF5Q99942 180 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms