RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	ZNF66	Q6ZN08	573 aa		11.56	□□□□□ -0.56
MATR3-238	ENST00000512107	VKORC1L1	Q8N0U8	176 aa		11.56	□□□□□ -0.56
MATR3-238	ENST00000512107	C5orf56	Q8N8D9	126 aa		11.56	□□□□□ -0.56
MATR3-238	ENST00000512107	ZBTB34	Q8NCN2	500 aa		11.56	□□□□□ -0.56
MATR3-238	ENST00000512107	OR2T10	Q8NGZ9	312 aa		11.56	□□□□□ -0.56
MATR3-238	ENST00000512107	TP53RK	Q96S44	253 aa		11.56	□□□□□ -0.56
MATR3-238	ENST00000512107	HSD17B10	Q99714	261 aa	Known RBP	11.56	□□□□□ -0.56
MATR3-238	ENST00000512107		H7C2Y5	167 aa		11.55	□□□□□ -0.56
MATR3-238	ENST00000512107	FCN1	O00602	326 aa		11.55	□□□□□ -0.56
MATR3-238	ENST00000512107	MPPED1	O15442	326 aa		11.55	□□□□□ -0.56
MATR3-238	ENST00000512107	SLC22A5	O76082	557 aa		11.55	□□□□□ -0.56
MATR3-238	ENST00000512107	S1PR2	O95136	353 aa		11.55	□□□□□ -0.56
MATR3-238	ENST00000512107	NDUFB6	O95139	128 aa		11.55	□□□□□ -0.56
MATR3-238	ENST00000512107	SSBP2	P81877	361 aa	Predicted RBP	11.55	□□□□□ -0.56
MATR3-238	ENST00000512107	PSG5	Q15238	335 aa		11.55	□□□□□ -0.56
MATR3-238	ENST00000512107	TMEM95	Q3KNT9	176 aa		11.55	□□□□□ -0.56
MATR3-238	ENST00000512107	TMEM177	Q53S58	311 aa		11.55	□□□□□ -0.56
MATR3-238	ENST00000512107		Q6ZSV7	163 aa		11.55	□□□□□ -0.56
MATR3-238	ENST00000512107	PDPN	Q86YL7	162 aa		11.55	□□□□□ -0.56
MATR3-238	ENST00000512107	SPAG16	Q8N0X2	631 aa		11.55	□□□□□ -0.56
MATR3-238	ENST00000512107	FAM71E2	Q8N5Q1	922 aa		11.55	□□□□□ -0.56
MATR3-238	ENST00000512107	LHFPL5	Q8TAF8	219 aa		11.55	□□□□□ -0.56
MATR3-238	ENST00000512107	FBXL15	Q9H469	300 aa		11.55	□□□□□ -0.56
MATR3-238	ENST00000512107	ZNF702P	Q9H963	129 aa		11.55	□□□□□ -0.56
MATR3-238	ENST00000512107	SCP2D1	Q9UJQ7	156 aa		11.55	□□□□□ -0.56
MATR3-238	ENST00000512107	PLXNB1	O43157	2135 aa		11.54	□□□□□ -0.56
MATR3-238	ENST00000512107	NAP1L6	A6NFF2	107 aa		11.54	□□□□□ -0.56
MATR3-238	ENST00000512107	NDUFA3	O95167	84 aa		11.54	□□□□□ -0.56
MATR3-238	ENST00000512107	RPA2	P15927	270 aa		11.54	□□□□□ -0.56
MATR3-238	ENST00000512107	F2R	P25116	425 aa		11.54	□□□□□ -0.56
MATR3-238	ENST00000512107	SLC6A1	P30531	599 aa		11.54	□□□□□ -0.56
MATR3-238	ENST00000512107	MC5R	P33032	325 aa		11.54	□□□□□ -0.56
MATR3-238	ENST00000512107	FAU	P35544	74 aa	Known RBP	11.54	□□□□□ -0.56
MATR3-238	ENST00000512107	PJVK	Q0ZLH3	352 aa		11.54	□□□□□ -0.56
MATR3-238	ENST00000512107	NPB	Q8NG41	125 aa		11.54	□□□□□ -0.56
MATR3-238	ENST00000512107	SPATA3	Q8NHX4	192 aa		11.54	□□□□□ -0.56
MATR3-238	ENST00000512107	DEDD2	Q8WXF8	326 aa		11.54	□□□□□ -0.56
MATR3-238	ENST00000512107	ADTRP	Q96IZ2	230 aa		11.54	□□□□□ -0.56
MATR3-238	ENST00000512107	HSPB9	Q9BQS6	159 aa		11.54	□□□□□ -0.56
MATR3-238	ENST00000512107	C7orf50	Q9BRJ6	194 aa	Known RBP	11.54	□□□□□ -0.56
MATR3-238	ENST00000512107	TRAV3	A0A0B4J244	114 aa		11.53	□□□□□ -0.56
MATR3-238	ENST00000512107	CRYM-AS1	A6NIL9	109 aa		11.53	□□□□□ -0.56
MATR3-238	ENST00000512107	ARPC1B	O15143	372 aa	Known RBP	11.53	□□□□□ -0.56
MATR3-238	ENST00000512107	APOA2	P02652	100 aa		11.53	□□□□□ -0.56
MATR3-238	ENST00000512107	MYOD1	P15172	320 aa		11.53	□□□□□ -0.56
MATR3-238	ENST00000512107	LPAR6	P43657	344 aa		11.53	□□□□□ -0.56
MATR3-238	ENST00000512107	RPS16	P62249	146 aa	Known RBP	11.53	□□□□□ -0.56
MATR3-238	ENST00000512107	TAGLN	Q01995	201 aa	Known RBP	11.53	□□□□□ -0.56
MATR3-238	ENST00000512107	SURF2	Q15527	256 aa	Predicted RBP	11.53	□□□□□ -0.56
MATR3-238	ENST00000512107	HIST2H2BD	Q6DRA6	164 aa		11.53	□□□□□ -0.56
MATR3-238	ENST00000512107	LPCAT3	Q6P1A2	487 aa		11.53	□□□□□ -0.56
MATR3-238	ENST00000512107	C11orf88	Q6PI97	169 aa		11.53	□□□□□ -0.56
MATR3-238	ENST00000512107	TMED4	Q7Z7H5	227 aa		11.53	□□□□□ -0.56
MATR3-238	ENST00000512107	ZFAND1	Q8TCF1	268 aa		11.53	□□□□□ -0.56
MATR3-238	ENST00000512107	FLYWCH2	Q96CP2	140 aa	Known RBP	11.53	□□□□□ -0.56
MATR3-238	ENST00000512107	ZNF486	Q96H40	463 aa	Predicted RBP	11.53	□□□□□ -0.56
MATR3-238	ENST00000512107	NAA60	Q9H7X0	242 aa		11.53	□□□□□ -0.56
MATR3-238	ENST00000512107	BEX1	Q9HBH7	125 aa		11.53	□□□□□ -0.56
MATR3-238	ENST00000512107	MOB4	Q9Y3A3	225 aa		11.53	□□□□□ -0.56
MATR3-238	ENST00000512107	COL6A5	A8TX70	2615 aa		11.53	□□□□□ -0.56
MATR3-238	ENST00000512107	BTBD17	A6NE02	478 aa		11.52	□□□□□ -0.57
MATR3-238	ENST00000512107	TRIM77	I1YAP6	450 aa		11.52	□□□□□ -0.57
MATR3-238	ENST00000512107	NBR2	O15453	112 aa		11.52	□□□□□ -0.57
MATR3-238	ENST00000512107	SLC25A17	O43808	307 aa		11.52	□□□□□ -0.57
MATR3-238	ENST00000512107	IFNA2	P01563	188 aa		11.52	□□□□□ -0.57
MATR3-238	ENST00000512107	TCRB	P04435	133 aa		11.52	□□□□□ -0.57
MATR3-238	ENST00000512107	OR5AC1	P0C628	307 aa		11.52	□□□□□ -0.57
MATR3-238	ENST00000512107	ANXA7	P20073	488 aa	Known RBP	11.52	□□□□□ -0.57
MATR3-238	ENST00000512107	NDP	Q00604	133 aa		11.52	□□□□□ -0.57
MATR3-238	ENST00000512107	DHODH	Q02127	395 aa		11.52	□□□□□ -0.57
MATR3-238	ENST00000512107	MMD	Q15546	238 aa		11.52	□□□□□ -0.57
MATR3-238	ENST00000512107	IZUMO4	Q1ZYL8	232 aa		11.52	□□□□□ -0.57
MATR3-238	ENST00000512107	ABCA11P	Q4W5N1	156 aa		11.52	□□□□□ -0.57
MATR3-238	ENST00000512107	NRARP	Q7Z6K4	114 aa		11.52	□□□□□ -0.57
MATR3-238	ENST00000512107	BORCS5	Q969J3	196 aa		11.52	□□□□□ -0.57
MATR3-238	ENST00000512107	HARBI1	Q96MB7	349 aa		11.52	□□□□□ -0.57
MATR3-238	ENST00000512107	JMJD8	Q96S16	334 aa		11.52	□□□□□ -0.57
MATR3-238	ENST00000512107	CLCC1	Q96S66	551 aa		11.52	□□□□□ -0.57
MATR3-238	ENST00000512107	FBXO7	Q9Y3I1	522 aa		11.52	□□□□□ -0.57
MATR3-238	ENST00000512107	ATR	Q13535	2644 aa		11.52	□□□□□ -0.57
MATR3-238	ENST00000512107	TRAV6	A0A075B6T7	132 aa		11.51	□□□□□ -0.57
MATR3-238	ENST00000512107		A0A0G2JRQ6	117 aa		11.51	□□□□□ -0.57
MATR3-238	ENST00000512107	C3orf85	A0A1B0GTC6	90 aa		11.51	□□□□□ -0.57
MATR3-238	ENST00000512107	NCBP2L	A6PVI3	153 aa	Known RBP	11.51	□□□□□ -0.57
MATR3-238	ENST00000512107	RRH	O14718	337 aa		11.51	□□□□□ -0.57
MATR3-238	ENST00000512107	SHOX	O15266	292 aa		11.51	□□□□□ -0.57
MATR3-238	ENST00000512107	IGKV1-5	P01602	117 aa		11.51	□□□□□ -0.57
MATR3-238	ENST00000512107	IL6R	P08887	468 aa	Predicted RBP	11.51	□□□□□ -0.57
MATR3-238	ENST00000512107	SAA1	P0DJI8	122 aa	Predicted RBP	11.51	□□□□□ -0.57
MATR3-238	ENST00000512107	AKR1C4	P17516	323 aa		11.51	□□□□□ -0.57
MATR3-238	ENST00000512107	ARHGDIB	P52566	201 aa		11.51	□□□□□ -0.57
MATR3-238	ENST00000512107	PPP1R1A	Q13522	171 aa		11.51	□□□□□ -0.57
MATR3-238	ENST00000512107	TMEM187	Q14656	261 aa		11.51	□□□□□ -0.57
MATR3-238	ENST00000512107	RBMS2	Q15434	407 aa	Known RBP	11.51	□□□□□ -0.57
MATR3-238	ENST00000512107	RTL8B	Q17RB0	113 aa		11.51	□□□□□ -0.57
MATR3-238	ENST00000512107	C5orf64	Q2M2E5	130 aa		11.51	□□□□□ -0.57
MATR3-238	ENST00000512107	DHRS7B	Q6IAN0	325 aa	Predicted RBP	11.51	□□□□□ -0.57
MATR3-238	ENST00000512107	SSX9	Q7RTT3	188 aa		11.51	□□□□□ -0.57
MATR3-238	ENST00000512107	SLC25A42	Q86VD7	318 aa		11.51	□□□□□ -0.57
MATR3-238	ENST00000512107	CMTM1	Q8IZ96	169 aa		11.51	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms