RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 DKKL1Q9UK85 242 aa2.3□□□□□ -2.04
CHD1-206ENST00000511067 MAP3K5Q99683 1374 aa2.3□□□□□ -2.04
CHD1-206ENST00000511067 CFAP43Q8NDM7 1665 aa2.3□□□□□ -2.04
CHD1-206ENST00000511067 GBF1Q92538 1859 aa2.29□□□□□ -2.04
CHD1-206ENST00000511067 SIPA1L1O43166 1804 aa2.29□□□□□ -2.04
CHD1-206ENST00000511067 WDR97A6NE52 1622 aa2.29□□□□□ -2.04
CHD1-206ENST00000511067 SCRIBQ14160 1630 aa2.29□□□□□ -2.04
CHD1-206ENST00000511067 FNDC10F2Z333 226 aa2.29□□□□□ -2.04
CHD1-206ENST00000511067 H0Y980 276 aa2.29□□□□□ -2.04
CHD1-206ENST00000511067 CXCR6O00574 342 aa2.29□□□□□ -2.04
CHD1-206ENST00000511067 S1PR2O95136 353 aa2.29□□□□□ -2.04
CHD1-206ENST00000511067 P0DMU3 169 aa2.29□□□□□ -2.04
CHD1-206ENST00000511067 FAM231AP0DMU4 169 aa2.29□□□□□ -2.04
CHD1-206ENST00000511067 FAM231CP0DMU5 169 aa2.29□□□□□ -2.04
CHD1-206ENST00000511067 BLVRAP53004 296 aa2.29□□□□□ -2.04
CHD1-206ENST00000511067 CTBP2P56545 445 aa2.29□□□□□ -2.04
CHD1-206ENST00000511067 RBM11P57052 281 aaKnown RBP2.29□□□□□ -2.04
CHD1-206ENST00000511067 TAS2R30P59541 319 aa2.29□□□□□ -2.04
CHD1-206ENST00000511067 FKBP1AP62942 108 aaKnown RBP2.29□□□□□ -2.04
CHD1-206ENST00000511067 LGALS9BQ3B8N2 356 aa2.29□□□□□ -2.04
CHD1-206ENST00000511067 FAM78BQ5VT40 261 aa2.29□□□□□ -2.04
CHD1-206ENST00000511067 DAND5Q8N907 189 aa2.29□□□□□ -2.04
CHD1-206ENST00000511067 CLDND2Q8NHS1 167 aa2.29□□□□□ -2.04
CHD1-206ENST00000511067 DDI1Q8WTU0 396 aa2.29□□□□□ -2.04
CHD1-206ENST00000511067 SLC35G5Q96KT7 338 aa2.29□□□□□ -2.04
CHD1-206ENST00000511067 MIEN1Q9BRT3 115 aa2.29□□□□□ -2.04
CHD1-206ENST00000511067 NDUFB11Q9NX14 153 aa2.29□□□□□ -2.04
CHD1-206ENST00000511067 KDM5BQ9UGL1 1544 aa2.28□□□□□ -2.04
CHD1-206ENST00000511067 TMED7-TICAM2A0A0A6YYA0 188 aa2.28□□□□□ -2.04
CHD1-206ENST00000511067 A0A1B0GW54 56 aa2.28□□□□□ -2.04
CHD1-206ENST00000511067 C11orf86A6NJI1 115 aa2.28□□□□□ -2.04
CHD1-206ENST00000511067 LRRN3E7EW58 273 aa2.28□□□□□ -2.04
CHD1-206ENST00000511067 APOMO95445 188 aa2.28□□□□□ -2.04
CHD1-206ENST00000511067 HLA-DQB2P05538 268 aa2.28□□□□□ -2.04
CHD1-206ENST00000511067 MAGOHP61326 146 aaKnown RBP2.28□□□□□ -2.04
CHD1-206ENST00000511067 GNA12Q03113 381 aa2.28□□□□□ -2.04
CHD1-206ENST00000511067 GLT6D1Q7Z4J2 308 aa2.28□□□□□ -2.04
CHD1-206ENST00000511067 SLC51BQ86UW2 128 aa2.28□□□□□ -2.04
CHD1-206ENST00000511067 ZNF283Q8N7M2 679 aa2.28□□□□□ -2.04
CHD1-206ENST00000511067 TMEM161BQ8NDZ6 487 aa2.28□□□□□ -2.04
CHD1-206ENST00000511067 SMCR5Q8TEV8 140 aa2.28□□□□□ -2.04
CHD1-206ENST00000511067 MRPS24Q96EL2 167 aaKnown RBP2.28□□□□□ -2.04
CHD1-206ENST00000511067 TXNDC17Q9BRA2 123 aa2.28□□□□□ -2.04
CHD1-206ENST00000511067 PTPRBP23467 1997 aa2.28□□□□□ -2.04
CHD1-206ENST00000511067 PTPRSQ13332 1948 aa2.28□□□□□ -2.04
CHD1-206ENST00000511067 ITGB4P16144 1822 aa2.27□□□□□ -2.05
CHD1-206ENST00000511067 A0A087WUU8 490 aa2.27□□□□□ -2.05
CHD1-206ENST00000511067 C2orf74A8MZ97 194 aa2.27□□□□□ -2.05
CHD1-206ENST00000511067 KRT75O95678 551 aa2.27□□□□□ -2.05
CHD1-206ENST00000511067 NPYP01303 97 aa2.27□□□□□ -2.05
CHD1-206ENST00000511067 KRT7P08729 469 aa2.27□□□□□ -2.05
CHD1-206ENST00000511067 UCHL1P09936 223 aa2.27□□□□□ -2.05
CHD1-206ENST00000511067 ZNF728P0DKX0 622 aa2.27□□□□□ -2.05
CHD1-206ENST00000511067 RPL12P30050 165 aaKnown RBP2.27□□□□□ -2.05
CHD1-206ENST00000511067 RPL27AP46776 148 aaKnown RBP2.27□□□□□ -2.05
CHD1-206ENST00000511067 GABRA2P47869 451 aa2.27□□□□□ -2.05
CHD1-206ENST00000511067 PSMD8P48556 350 aa2.27□□□□□ -2.05
CHD1-206ENST00000511067 TBPL1P62380 186 aa2.27□□□□□ -2.05
CHD1-206ENST00000511067 SBSNQ6UWP8 590 aa2.27□□□□□ -2.05
CHD1-206ENST00000511067 SPATA12Q7Z6I5 190 aa2.27□□□□□ -2.05
CHD1-206ENST00000511067 UBL4BQ8N7F7 174 aa2.27□□□□□ -2.05
CHD1-206ENST00000511067 RPS4Y2Q8TD47 263 aa2.27□□□□□ -2.05
CHD1-206ENST00000511067 TMA16Q96EY4 203 aaKnown RBP2.27□□□□□ -2.05
CHD1-206ENST00000511067 SFRP2Q96HF1 295 aa2.27□□□□□ -2.05
CHD1-206ENST00000511067 ARL5BQ96KC2 179 aa2.27□□□□□ -2.05
CHD1-206ENST00000511067 BABAM2Q9NXR7 383 aa2.27□□□□□ -2.05
CHD1-206ENST00000511067 SAMHD1Q9Y3Z3 626 aaKnown RBP2.27□□□□□ -2.05
CHD1-206ENST00000511067 MROH2BQ7Z745 1585 aa2.27□□□□□ -2.05
CHD1-206ENST00000511067 ADGRB3O60242 1522 aa2.27□□□□□ -2.05
CHD1-206ENST00000511067 TOP2AP11388 1531 aaKnown RBP2.27□□□□□ -2.05
CHD1-206ENST00000511067 CCDC88BA6NC98 1476 aa2.26□□□□□ -2.05
CHD1-206ENST00000511067 GOLGA3Q08378 1498 aa2.26□□□□□ -2.05
CHD1-206ENST00000511067 DOCK10Q96BY6 2186 aa2.26□□□□□ -2.05
CHD1-206ENST00000511067 E9PCH4 1651 aa2.26□□□□□ -2.05
CHD1-206ENST00000511067 A0A1W2PQD3 144 aa2.26□□□□□ -2.05
CHD1-206ENST00000511067 C9JCJ5 164 aa2.26□□□□□ -2.05
CHD1-206ENST00000511067 MYL12AP19105 171 aa2.26□□□□□ -2.05
CHD1-206ENST00000511067 ZNF140P52738 457 aaPredicted RBP2.26□□□□□ -2.05
CHD1-206ENST00000511067 DEFB103AP81534 67 aa2.26□□□□□ -2.05
CHD1-206ENST00000511067 BATFQ16520 125 aa2.26□□□□□ -2.05
CHD1-206ENST00000511067 CDKL4Q5MAI5 379 aa2.26□□□□□ -2.05
CHD1-206ENST00000511067 AGTRAPQ6RW13 159 aa2.26□□□□□ -2.05
CHD1-206ENST00000511067 COMMD7Q86VX2 200 aa2.26□□□□□ -2.05
CHD1-206ENST00000511067 SLC35F6Q8N357 371 aa2.26□□□□□ -2.05
CHD1-206ENST00000511067 OR4X1Q8NH49 305 aa2.26□□□□□ -2.05
CHD1-206ENST00000511067 RNF133Q8WVZ7 376 aa2.26□□□□□ -2.05
CHD1-206ENST00000511067 FGF13Q92913 245 aa2.26□□□□□ -2.05
CHD1-206ENST00000511067 C12orf43Q96C57 262 aaKnown RBP2.26□□□□□ -2.05
CHD1-206ENST00000511067 CCL13Q99616 98 aa2.26□□□□□ -2.05
CHD1-206ENST00000511067 OR51I2Q9H344 312 aa2.26□□□□□ -2.05
CHD1-206ENST00000511067 C3orf18Q9UK00 162 aa2.26□□□□□ -2.05
CHD1-206ENST00000511067 POLR3HQ9Y535 204 aaPredicted RBP2.26□□□□□ -2.05
CHD1-206ENST00000511067 NCOA2Q15596 1464 aa2.26□□□□□ -2.05
CHD1-206ENST00000511067 EEA1Q15075 1411 aa2.25□□□□□ -2.05
CHD1-206ENST00000511067 VPS8Q8N3P4 1428 aa2.25□□□□□ -2.05
CHD1-206ENST00000511067 COL5A3P25940 1745 aaPredicted RBP2.25□□□□□ -2.05
CHD1-206ENST00000511067 KIF15Q9NS87 1388 aa2.25□□□□□ -2.05
CHD1-206ENST00000511067 CTTNBP2Q8WZ74 1663 aa2.25□□□□□ -2.05
CHD1-206ENST00000511067 HECW1Q76N89 1606 aa2.25□□□□□ -2.05
CHD1-206ENST00000511067 VWDEQ8N2E2 1590 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms