RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 LIPKQ5VXJ0 399 aa12□□□□□ -0.49
RAB40C-202ENST00000509637 CABLES2Q9BTV7 478 aa12□□□□□ -0.49
RAB40C-202ENST00000509637 OR2D2Q9H210 308 aa12□□□□□ -0.49
RAB40C-202ENST00000509637 TUBA4BQ9H853 241 aa12□□□□□ -0.49
RAB40C-202ENST00000509637 C12orf4Q9NQ89 552 aa12□□□□□ -0.49
RAB40C-202ENST00000509637 COA4Q9NYJ1 87 aa12□□□□□ -0.49
RAB40C-202ENST00000509637 ZNF230Q9UIE0 474 aaPredicted RBP12□□□□□ -0.49
RAB40C-202ENST00000509637 ELF5Q9UKW6 265 aaPredicted RBP12□□□□□ -0.49
RAB40C-202ENST00000509637 TRBV6-7A0A0A0MS04 114 aa11.99□□□□□ -0.49
RAB40C-202ENST00000509637 TRBV9A0A0B4J1U6 114 aa11.99□□□□□ -0.49
RAB40C-202ENST00000509637 TMEM272A0A1B0GTI8 110 aa11.99□□□□□ -0.49
RAB40C-202ENST00000509637 PTGES3LE9PB15 166 aa11.99□□□□□ -0.49
RAB40C-202ENST00000509637 APOA2P02652 100 aa11.99□□□□□ -0.49
RAB40C-202ENST00000509637 PRSS8Q16651 343 aa11.99□□□□□ -0.49
RAB40C-202ENST00000509637 OGFRL1Q5TC84 451 aaPredicted RBP11.99□□□□□ -0.49
RAB40C-202ENST00000509637 Q8N402 240 aa11.99□□□□□ -0.49
RAB40C-202ENST00000509637 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.99□□□□□ -0.49
RAB40C-202ENST00000509637 THRSPQ92748 146 aa11.99□□□□□ -0.49
RAB40C-202ENST00000509637 HARBI1Q96MB7 349 aa11.99□□□□□ -0.49
RAB40C-202ENST00000509637 CEPT1Q9Y6K0 416 aa11.99□□□□□ -0.49
RAB40C-202ENST00000509637 A0A1B0GW64 132 aa11.98□□□□□ -0.49
RAB40C-202ENST00000509637 E7EUB6 86 aa11.98□□□□□ -0.49
RAB40C-202ENST00000509637 BET1O15155 118 aa11.98□□□□□ -0.49
RAB40C-202ENST00000509637 FABP7O15540 132 aa11.98□□□□□ -0.49
RAB40C-202ENST00000509637 HLA-AP01891 365 aaKnown RBP11.98□□□□□ -0.49
RAB40C-202ENST00000509637 TAGLNQ01995 201 aaKnown RBP11.98□□□□□ -0.49
RAB40C-202ENST00000509637 TPBGQ13641 420 aa11.98□□□□□ -0.49
RAB40C-202ENST00000509637 RCN1Q15293 331 aa11.98□□□□□ -0.49
RAB40C-202ENST00000509637 DEFB114Q30KQ6 69 aa11.98□□□□□ -0.49
RAB40C-202ENST00000509637 FAM3DQ96BQ1 224 aa11.98□□□□□ -0.49
RAB40C-202ENST00000509637 URM1Q9BTM9 101 aaKnown RBP11.98□□□□□ -0.49
RAB40C-202ENST00000509637 SHOXO15266 292 aa11.97□□□□□ -0.49
RAB40C-202ENST00000509637 OR2A4O95047 310 aa11.97□□□□□ -0.49
RAB40C-202ENST00000509637 FCGR3AP08637 254 aa11.97□□□□□ -0.49
RAB40C-202ENST00000509637 OR9G9P0C7N8 305 aa11.97□□□□□ -0.49
RAB40C-202ENST00000509637 DUTP33316 252 aaKnown RBP11.97□□□□□ -0.49
RAB40C-202ENST00000509637 CD81P60033 236 aa11.97□□□□□ -0.49
RAB40C-202ENST00000509637 RHOGP84095 191 aa11.97□□□□□ -0.49
RAB40C-202ENST00000509637 FABP5Q01469 135 aa11.97□□□□□ -0.49
RAB40C-202ENST00000509637 RPEL1Q2QD12 228 aa11.97□□□□□ -0.49
RAB40C-202ENST00000509637 LCN12Q6JVE5 192 aa11.97□□□□□ -0.49
RAB40C-202ENST00000509637 OR4A4PQ8NGN8 299 aa11.97□□□□□ -0.49
RAB40C-202ENST00000509637 SRSF12Q8WXF0 261 aaKnown RBP11.97□□□□□ -0.49
RAB40C-202ENST00000509637 USMG5Q96IX5 58 aa11.97□□□□□ -0.49
RAB40C-202ENST00000509637 TMEM68Q96MH6 324 aa11.97□□□□□ -0.49
RAB40C-202ENST00000509637 NEURL2Q9BR09 285 aa11.97□□□□□ -0.49
RAB40C-202ENST00000509637 MND1Q9BWT6 205 aa11.97□□□□□ -0.49
RAB40C-202ENST00000509637 PLGRKTQ9HBL7 147 aa11.97□□□□□ -0.49
RAB40C-202ENST00000509637 MGAT4AQ9UM21 535 aa11.97□□□□□ -0.49
RAB40C-202ENST00000509637 A0A0B4J203 849 aa11.96□□□□□ -0.49
RAB40C-202ENST00000509637 PPP5D1E7EU14 171 aa11.96□□□□□ -0.49
RAB40C-202ENST00000509637 RAB27BO00194 218 aa11.96□□□□□ -0.49
RAB40C-202ENST00000509637 CASQ2O14958 399 aaPredicted RBP11.96□□□□□ -0.49
RAB40C-202ENST00000509637 IFNA6P05013 189 aa11.96□□□□□ -0.49
RAB40C-202ENST00000509637 AADACP22760 399 aa11.96□□□□□ -0.49
RAB40C-202ENST00000509637 OR10A3P58181 314 aa11.96□□□□□ -0.49
RAB40C-202ENST00000509637 BRWD1-AS2P59051 145 aa11.96□□□□□ -0.49
RAB40C-202ENST00000509637 RPL30P62888 115 aaKnown RBP11.96□□□□□ -0.49
RAB40C-202ENST00000509637 EWSR1Q01844 656 aaKnown RBP eCLIP11.96□□□□□ -0.498e-7■■■■□ 23.2
RAB40C-202ENST00000509637 MED22Q15528 200 aa11.96□□□□□ -0.49
RAB40C-202ENST00000509637 RAB11BQ15907 218 aa11.96□□□□□ -0.49
RAB40C-202ENST00000509637 TNXAQ16473 311 aa11.96□□□□□ -0.49
RAB40C-202ENST00000509637 HES5Q5TA89 166 aa11.96□□□□□ -0.49
RAB40C-202ENST00000509637 TEX45Q8NA69 505 aa11.96□□□□□ -0.49
RAB40C-202ENST00000509637 WDR89Q96FK6 387 aaPredicted RBP11.96□□□□□ -0.49
RAB40C-202ENST00000509637 ZNF430Q9H8G1 570 aaPredicted RBP11.96□□□□□ -0.49
RAB40C-202ENST00000509637 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.95□□□□□ -0.5
RAB40C-202ENST00000509637 HMX3A6NHT5 357 aa11.95□□□□□ -0.5
RAB40C-202ENST00000509637 MFNGO00587 321 aa11.95□□□□□ -0.5
RAB40C-202ENST00000509637 DENRO43583 198 aaKnown RBP11.95□□□□□ -0.5
RAB40C-202ENST00000509637 CRYZL1O95825 349 aa11.95□□□□□ -0.5
RAB40C-202ENST00000509637 IGLV2-14P01704 120 aa11.95□□□□□ -0.5
RAB40C-202ENST00000509637 GNB3P16520 340 aa11.95□□□□□ -0.5
RAB40C-202ENST00000509637 UBE2KP61086 200 aa11.95□□□□□ -0.5
RAB40C-202ENST00000509637 EXOSC2Q13868 293 aaKnown RBP11.95□□□□□ -0.5
RAB40C-202ENST00000509637 GTSCR1Q86UQ5 136 aa11.95□□□□□ -0.5
RAB40C-202ENST00000509637 H1FOOQ8IZA3 346 aaPredicted RBP11.95□□□□□ -0.5
RAB40C-202ENST00000509637 CACNG8Q8WXS5 425 aa11.95□□□□□ -0.5
RAB40C-202ENST00000509637 SNAPC3Q92966 411 aa11.95□□□□□ -0.5
RAB40C-202ENST00000509637 C8orf4Q9NR00 106 aa11.95□□□□□ -0.5
RAB40C-202ENST00000509637 NKX1-2Q9UD57 310 aaPredicted RBP11.95□□□□□ -0.5
RAB40C-202ENST00000509637 S4R3C0 116 aa11.95□□□□□ -0.5
RAB40C-202ENST00000509637 C2orf70A6NJV1 201 aa11.94□□□□□ -0.5
RAB40C-202ENST00000509637 TEX22C9J3V5 150 aa11.94□□□□□ -0.5
RAB40C-202ENST00000509637 J3QRK9 145 aa11.94□□□□□ -0.5
RAB40C-202ENST00000509637 OR2C1O95371 312 aa11.94□□□□□ -0.5
RAB40C-202ENST00000509637 IL6RP08887 468 aaPredicted RBP11.94□□□□□ -0.5
RAB40C-202ENST00000509637 SAA1P0DJI8 122 aaPredicted RBP11.94□□□□□ -0.5
RAB40C-202ENST00000509637 KIR2DS2P43631 304 aa11.94□□□□□ -0.5
RAB40C-202ENST00000509637 MAP2K4P45985 399 aa11.94□□□□□ -0.5
RAB40C-202ENST00000509637 NR2C2APQ86WQ0 139 aa11.94□□□□□ -0.5
RAB40C-202ENST00000509637 OR56B1Q8NGI3 324 aa11.94□□□□□ -0.5
RAB40C-202ENST00000509637 DUSP21Q9H596 190 aa11.94□□□□□ -0.5
RAB40C-202ENST00000509637 SRD5A3Q9H8P0 318 aa11.94□□□□□ -0.5
RAB40C-202ENST00000509637 ZC4H2Q9NQZ6 224 aa11.94□□□□□ -0.5
RAB40C-202ENST00000509637 OR11H12B2RN74 326 aa11.93□□□□□ -0.5
RAB40C-202ENST00000509637 OR2J3O76001 311 aa11.93□□□□□ -0.5
RAB40C-202ENST00000509637 IGHV3-23P01764 117 aa11.93□□□□□ -0.5
RAB40C-202ENST00000509637 FOLR2P14207 255 aa11.93□□□□□ -0.5
RAB40C-202ENST00000509637 MYOD1P15172 320 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms