RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 APOA2P02652 100 aa10.06□□□□□ -0.8
DDX41-210ENST00000509576 EWSR1Q01844 656 aaKnown RBP eCLIP10.06□□□□□ -0.8
DDX41-210ENST00000509576 TAGLNQ01995 201 aaKnown RBP10.06□□□□□ -0.8
DDX41-210ENST00000509576 PRSS8Q16651 343 aa10.06□□□□□ -0.8
DDX41-210ENST00000509576 LIPKQ5VXJ0 399 aa10.06□□□□□ -0.8
DDX41-210ENST00000509576 RNLSQ5VYX0 342 aa10.06□□□□□ -0.8
DDX41-210ENST00000509576 C8orf59Q8N0T1 100 aaPredicted RBP10.06□□□□□ -0.8
DDX41-210ENST00000509576 Q8N402 240 aa10.06□□□□□ -0.8
DDX41-210ENST00000509576 MS4A15Q8N5U1 240 aa10.06□□□□□ -0.8
DDX41-210ENST00000509576 PACRGLQ8N7B6 248 aa10.06□□□□□ -0.8
DDX41-210ENST00000509576 CMSS1Q9BQ75 279 aaKnown RBP10.06□□□□□ -0.8
DDX41-210ENST00000509576 RIMS4Q9H426 269 aaPredicted RBP10.06□□□□□ -0.8
DDX41-210ENST00000509576 COA4Q9NYJ1 87 aa10.06□□□□□ -0.8
DDX41-210ENST00000509576 ELF5Q9UKW6 265 aaPredicted RBP10.06□□□□□ -0.8
DDX41-210ENST00000509576 TRBV6-7A0A0A0MS04 114 aa10.05□□□□□ -0.8
DDX41-210ENST00000509576 A0A0G2JLM5 398 aa10.05□□□□□ -0.8
DDX41-210ENST00000509576 TMEM272A0A1B0GTI8 110 aa10.05□□□□□ -0.8
DDX41-210ENST00000509576 PPP5D1E7EU14 171 aa10.05□□□□□ -0.8
DDX41-210ENST00000509576 FABP7O15540 132 aa10.05□□□□□ -0.8
DDX41-210ENST00000509576 OR2A4O95047 310 aa10.05□□□□□ -0.8
DDX41-210ENST00000509576 FCGR3AP08637 254 aa10.05□□□□□ -0.8
DDX41-210ENST00000509576 CD81P60033 236 aa10.05□□□□□ -0.8
DDX41-210ENST00000509576 RHOGP84095 191 aa10.05□□□□□ -0.8
DDX41-210ENST00000509576 SPHARQ15513 63 aa10.05□□□□□ -0.8
DDX41-210ENST00000509576 OGFRL1Q5TC84 451 aaPredicted RBP10.05□□□□□ -0.8
DDX41-210ENST00000509576 LCN12Q6JVE5 192 aa10.05□□□□□ -0.8
DDX41-210ENST00000509576 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.05□□□□□ -0.8
DDX41-210ENST00000509576 SRSF12Q8WXF0 261 aaKnown RBP10.05□□□□□ -0.8
DDX41-210ENST00000509576 CACNG8Q8WXS5 425 aa10.05□□□□□ -0.8
DDX41-210ENST00000509576 THRSPQ92748 146 aa10.05□□□□□ -0.8
DDX41-210ENST00000509576 WDR89Q96FK6 387 aaPredicted RBP10.05□□□□□ -0.8
DDX41-210ENST00000509576 NEURL2Q9BR09 285 aa10.05□□□□□ -0.8
DDX41-210ENST00000509576 TUBA4BQ9H853 241 aa10.05□□□□□ -0.8
DDX41-210ENST00000509576 ZNF430Q9H8G1 570 aaPredicted RBP10.05□□□□□ -0.8
DDX41-210ENST00000509576 NKX1-2Q9UD57 310 aaPredicted RBP10.05□□□□□ -0.8
DDX41-210ENST00000509576 MFNGO00587 321 aa10.04□□□□□ -0.8
DDX41-210ENST00000509576 BET1O15155 118 aa10.04□□□□□ -0.8
DDX41-210ENST00000509576 IGLV2-14P01704 120 aa10.04□□□□□ -0.8
DDX41-210ENST00000509576 OR9G9P0C7N8 305 aa10.04□□□□□ -0.8
DDX41-210ENST00000509576 CD40LGP29965 261 aa10.04□□□□□ -0.8
DDX41-210ENST00000509576 DUTP33316 252 aaKnown RBP10.04□□□□□ -0.8
DDX41-210ENST00000509576 LGALS7P47929 136 aa10.04□□□□□ -0.8
DDX41-210ENST00000509576 BRWD1-AS2P59051 145 aa10.04□□□□□ -0.8
DDX41-210ENST00000509576 EXOSC2Q13868 293 aaKnown RBP10.04□□□□□ -0.8
DDX41-210ENST00000509576 RCN1Q15293 331 aa10.04□□□□□ -0.8
DDX41-210ENST00000509576 RPEL1Q2QD12 228 aa10.04□□□□□ -0.8
DDX41-210ENST00000509576 DEFB114Q30KQ6 69 aa10.04□□□□□ -0.8
DDX41-210ENST00000509576 C2orf76Q3KRA6 126 aa10.04□□□□□ -0.8
DDX41-210ENST00000509576 GTSCR1Q86UQ5 136 aa10.04□□□□□ -0.8
DDX41-210ENST00000509576 OR4A4PQ8NGN8 299 aa10.04□□□□□ -0.8
DDX41-210ENST00000509576 USMG5Q96IX5 58 aa10.04□□□□□ -0.8
DDX41-210ENST00000509576 MND1Q9BWT6 205 aa10.04□□□□□ -0.8
DDX41-210ENST00000509576 ZC4H2Q9NQZ6 224 aa10.04□□□□□ -0.8
DDX41-210ENST00000509576 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.03□□□□□ -0.8
DDX41-210ENST00000509576 A0A0B4J203 849 aa10.03□□□□□ -0.8
DDX41-210ENST00000509576 C2orf70A6NJV1 201 aa10.03□□□□□ -0.8
DDX41-210ENST00000509576 TEX22C9J3V5 150 aa10.03□□□□□ -0.8
DDX41-210ENST00000509576 PTGES3LE9PB15 166 aa10.03□□□□□ -0.8
DDX41-210ENST00000509576 RAB27BO00194 218 aa10.03□□□□□ -0.8
DDX41-210ENST00000509576 CASQ2O14958 399 aaPredicted RBP10.03□□□□□ -0.8
DDX41-210ENST00000509576 SHOXO15266 292 aa10.03□□□□□ -0.8
DDX41-210ENST00000509576 CRYZL1O95825 349 aa10.03□□□□□ -0.8
DDX41-210ENST00000509576 AADACP22760 399 aa10.03□□□□□ -0.8
DDX41-210ENST00000509576 OR10A3P58181 314 aa10.03□□□□□ -0.8
DDX41-210ENST00000509576 UBE2KP61086 200 aa10.03□□□□□ -0.8
DDX41-210ENST00000509576 RPL30P62888 115 aaKnown RBP10.03□□□□□ -0.8
DDX41-210ENST00000509576 FABP5Q01469 135 aa10.03□□□□□ -0.8
DDX41-210ENST00000509576 TNXAQ16473 311 aa10.03□□□□□ -0.8
DDX41-210ENST00000509576 C10orf67Q8IYJ2 551 aa10.03□□□□□ -0.8
DDX41-210ENST00000509576 FAM3DQ96BQ1 224 aa10.03□□□□□ -0.8
DDX41-210ENST00000509576 CCDC140Q96MF4 163 aa10.03□□□□□ -0.8
DDX41-210ENST00000509576 URM1Q9BTM9 101 aaKnown RBP10.03□□□□□ -0.8
DDX41-210ENST00000509576 SRD5A3Q9H8P0 318 aa10.03□□□□□ -0.8
DDX41-210ENST00000509576 PLGRKTQ9HBL7 147 aa10.03□□□□□ -0.8
DDX41-210ENST00000509576 MGAT4AQ9UM21 535 aa10.03□□□□□ -0.8
DDX41-210ENST00000509576 S4R3C0 116 aa10.03□□□□□ -0.8
DDX41-210ENST00000509576 HERC2O95714 4834 aa10.02□□□□□ -0.8
DDX41-210ENST00000509576 HMX3A6NHT5 357 aa10.02□□□□□ -0.81
DDX41-210ENST00000509576 OR2J3O76001 311 aa10.02□□□□□ -0.81
DDX41-210ENST00000509576 IFNA6P05013 189 aa10.02□□□□□ -0.81
DDX41-210ENST00000509576 SAA1P0DJI8 122 aaPredicted RBP10.02□□□□□ -0.81
DDX41-210ENST00000509576 MYOD1P15172 320 aa10.02□□□□□ -0.81
DDX41-210ENST00000509576 GNB3P16520 340 aa10.02□□□□□ -0.81
DDX41-210ENST00000509576 TPBGQ13641 420 aa10.02□□□□□ -0.81
DDX41-210ENST00000509576 MED22Q15528 200 aa10.02□□□□□ -0.81
DDX41-210ENST00000509576 RAB11BQ15907 218 aa10.02□□□□□ -0.81
DDX41-210ENST00000509576 HES5Q5TA89 166 aa10.02□□□□□ -0.81
DDX41-210ENST00000509576 NR2C2APQ86WQ0 139 aa10.02□□□□□ -0.81
DDX41-210ENST00000509576 H1FOOQ8IZA3 346 aaPredicted RBP10.02□□□□□ -0.81
DDX41-210ENST00000509576 VKORC1L1Q8N0U8 176 aa10.02□□□□□ -0.81
DDX41-210ENST00000509576 TEX45Q8NA69 505 aa10.02□□□□□ -0.81
DDX41-210ENST00000509576 SNAPC3Q92966 411 aa10.02□□□□□ -0.81
DDX41-210ENST00000509576 TMEM68Q96MH6 324 aa10.02□□□□□ -0.81
DDX41-210ENST00000509576 VPS13DQ5THJ4 4388 aa10.02□□□□□ -0.81
DDX41-210ENST00000509576 HECTD4Q9Y4D8 3996 aa10.01□□□□□ -0.81
DDX41-210ENST00000509576 TMEM213A2RRL7 107 aa10.01□□□□□ -0.81
DDX41-210ENST00000509576 CGB1A6NKQ9 187 aa10.01□□□□□ -0.81
DDX41-210ENST00000509576 OR11H12B2RN74 326 aa10.01□□□□□ -0.81
DDX41-210ENST00000509576 DENRO43583 198 aaKnown RBP10.01□□□□□ -0.81
DDX41-210ENST00000509576 OR2C1O95371 312 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms