RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.48□□□□□ -0.57
UBE2D3-228ENST00000508974 IGHV4OR15-8A0A075B7B6 117 aa11.47□□□□□ -0.57
UBE2D3-228ENST00000508974 A0A087WW49 117 aa11.47□□□□□ -0.57
UBE2D3-228ENST00000508974 LINC00473A8K010 186 aa11.47□□□□□ -0.57
UBE2D3-228ENST00000508974 SSX5O60225 188 aa11.47□□□□□ -0.57
UBE2D3-228ENST00000508974 FCER2P06734 321 aa11.47□□□□□ -0.57
UBE2D3-228ENST00000508974 APELAP0DMC3 54 aa11.47□□□□□ -0.57
UBE2D3-228ENST00000508974 RUNX1Q01196 453 aa11.47□□□□□ -0.57
UBE2D3-228ENST00000508974 DEFA5Q01523 94 aa11.47□□□□□ -0.57
UBE2D3-228ENST00000508974 SRSF7Q16629 238 aaKnown RBP eCLIP11.47□□□□□ -0.57
UBE2D3-228ENST00000508974 RTL8BQ17RB0 113 aa11.47□□□□□ -0.57
UBE2D3-228ENST00000508974 LINC01559Q495D7 138 aa11.47□□□□□ -0.57
UBE2D3-228ENST00000508974 AKIRIN2Q53H80 203 aa11.47□□□□□ -0.57
UBE2D3-228ENST00000508974 OR2B11Q5JQS5 317 aa11.47□□□□□ -0.57
UBE2D3-228ENST00000508974 IDO2Q6ZQW0 420 aa11.47□□□□□ -0.57
UBE2D3-228ENST00000508974 Q6ZS49 121 aa11.47□□□□□ -0.57
UBE2D3-228ENST00000508974 TCTEX1D1Q8N7M0 179 aa11.47□□□□□ -0.57
UBE2D3-228ENST00000508974 OR5T1Q8NG75 326 aa11.47□□□□□ -0.57
UBE2D3-228ENST00000508974 DCUN1D4Q92564 292 aa11.47□□□□□ -0.57
UBE2D3-228ENST00000508974 SLC25A38Q96DW6 304 aa11.47□□□□□ -0.57
UBE2D3-228ENST00000508974 TRAV18A0A075B6X5 111 aa11.46□□□□□ -0.57
UBE2D3-228ENST00000508974 SRRM4A7MD48 611 aaKnown RBP11.46□□□□□ -0.57
UBE2D3-228ENST00000508974 J3QL48 77 aa11.46□□□□□ -0.57
UBE2D3-228ENST00000508974 TUSC2O75896 110 aa11.46□□□□□ -0.57
UBE2D3-228ENST00000508974 SCGNO76038 276 aa11.46□□□□□ -0.57
UBE2D3-228ENST00000508974 DIRAS3O95661 229 aa11.46□□□□□ -0.57
UBE2D3-228ENST00000508974 CRYZL1O95825 349 aa11.46□□□□□ -0.57
UBE2D3-228ENST00000508974 TRGV3P03979 118 aa11.46□□□□□ -0.57
UBE2D3-228ENST00000508974 LGALS1P09382 135 aaKnown RBP11.46□□□□□ -0.57
UBE2D3-228ENST00000508974 CD40LGP29965 261 aa11.46□□□□□ -0.57
UBE2D3-228ENST00000508974 DUTP33316 252 aaKnown RBP11.46□□□□□ -0.57
UBE2D3-228ENST00000508974 SSBP2P81877 361 aaPredicted RBP11.46□□□□□ -0.57
UBE2D3-228ENST00000508974 CD69Q07108 199 aa11.46□□□□□ -0.57
UBE2D3-228ENST00000508974 C11orf87Q6NUJ2 197 aa11.46□□□□□ -0.57
UBE2D3-228ENST00000508974 SCOCQ9UIL1 159 aa11.46□□□□□ -0.57
UBE2D3-228ENST00000508974 IGKV1D-13A0A0B4J2D9 117 aa11.45□□□□□ -0.58
UBE2D3-228ENST00000508974 LINC01619G3V211 115 aa11.45□□□□□ -0.58
UBE2D3-228ENST00000508974 OVOL1O14753 267 aa11.45□□□□□ -0.58
UBE2D3-228ENST00000508974 LY86O95711 162 aa11.45□□□□□ -0.58
UBE2D3-228ENST00000508974 IGKV1-13P0DP09 117 aa11.45□□□□□ -0.58
UBE2D3-228ENST00000508974 PTHLHP12272 177 aa11.45□□□□□ -0.58
UBE2D3-228ENST00000508974 LGALS7P47929 136 aa11.45□□□□□ -0.58
UBE2D3-228ENST00000508974 LSM3P62310 102 aaKnown RBP11.45□□□□□ -0.58
UBE2D3-228ENST00000508974 PITPNAQ00169 270 aa11.45□□□□□ -0.58
UBE2D3-228ENST00000508974 TAGLNQ01995 201 aaKnown RBP11.45□□□□□ -0.58
UBE2D3-228ENST00000508974 TMEM177Q53S58 311 aa11.45□□□□□ -0.58
UBE2D3-228ENST00000508974 PYHIN1Q6K0P9 492 aa11.45□□□□□ -0.58
UBE2D3-228ENST00000508974 ZNF645Q8N7E2 425 aa11.45□□□□□ -0.58
UBE2D3-228ENST00000508974 GVQW1Q8N7I0 195 aa11.45□□□□□ -0.58
UBE2D3-228ENST00000508974 DDB2Q92466 427 aa11.45□□□□□ -0.58
UBE2D3-228ENST00000508974 DLX4Q92988 240 aaPredicted RBP11.45□□□□□ -0.58
UBE2D3-228ENST00000508974 PHB2Q99623 299 aa11.45□□□□□ -0.58
UBE2D3-228ENST00000508974 DCUN1D5Q9BTE7 237 aa11.45□□□□□ -0.58
UBE2D3-228ENST00000508974 DCSTAMPQ9H295 470 aa11.45□□□□□ -0.58
UBE2D3-228ENST00000508974 ANXA10Q9UJ72 324 aa11.45□□□□□ -0.58
UBE2D3-228ENST00000508974 RAMP3O60896 148 aa11.44□□□□□ -0.58
UBE2D3-228ENST00000508974 FCGR3BO75015 233 aa11.44□□□□□ -0.58
UBE2D3-228ENST00000508974 SAP30O75446 220 aa11.44□□□□□ -0.58
UBE2D3-228ENST00000508974 CRYGBP07316 175 aa11.44□□□□□ -0.58
UBE2D3-228ENST00000508974 RRASP10301 218 aa11.44□□□□□ -0.58
UBE2D3-228ENST00000508974 ARPC4P59998 168 aa11.44□□□□□ -0.58
UBE2D3-228ENST00000508974 TNXAQ16473 311 aa11.44□□□□□ -0.58
UBE2D3-228ENST00000508974 VMA21Q3ZAQ7 101 aa11.44□□□□□ -0.58
UBE2D3-228ENST00000508974 CNIH2Q6PI25 160 aa11.44□□□□□ -0.58
UBE2D3-228ENST00000508974 KCTD9Q7L273 389 aa11.44□□□□□ -0.58
UBE2D3-228ENST00000508974 ACOT12Q8WYK0 555 aa11.44□□□□□ -0.58
UBE2D3-228ENST00000508974 ADTRPQ96IZ2 230 aa11.44□□□□□ -0.58
UBE2D3-228ENST00000508974 ZMAT5Q9UDW3 170 aaKnown RBP11.44□□□□□ -0.58
UBE2D3-228ENST00000508974 OR2W1Q9Y3N9 320 aa11.44□□□□□ -0.58
UBE2D3-228ENST00000508974 ETV7Q9Y603 341 aa11.44□□□□□ -0.58
UBE2D3-228ENST00000508974 MEIS3P1A6NDR6 274 aa11.43□□□□□ -0.58
UBE2D3-228ENST00000508974 CTXN2P0C2S0 81 aa11.43□□□□□ -0.58
UBE2D3-228ENST00000508974 RPL30P62888 115 aaKnown RBP11.43□□□□□ -0.58
UBE2D3-228ENST00000508974 POC5Q8NA72 575 aa11.43□□□□□ -0.58
UBE2D3-228ENST00000508974 BEST4Q8NFU0 473 aa11.43□□□□□ -0.58
UBE2D3-228ENST00000508974 TSPAN14Q8NG11 270 aa11.43□□□□□ -0.58
UBE2D3-228ENST00000508974 GPHA2Q96T91 129 aa11.43□□□□□ -0.58
UBE2D3-228ENST00000508974 SLA2Q9H6Q3 261 aa11.43□□□□□ -0.58
UBE2D3-228ENST00000508974 COA4Q9NYJ1 87 aa11.43□□□□□ -0.58
UBE2D3-228ENST00000508974 SPATA2Q9UM82 520 aa11.43□□□□□ -0.58
UBE2D3-228ENST00000508974 C13orf42A0A1B0GVH6 325 aa11.42□□□□□ -0.58
UBE2D3-228ENST00000508974 ANKRD34BA5PLL1 514 aa11.42□□□□□ -0.58
UBE2D3-228ENST00000508974 MSGN1A6NI15 193 aa11.42□□□□□ -0.58
UBE2D3-228ENST00000508974 AIREO43918 545 aa11.42□□□□□ -0.58
UBE2D3-228ENST00000508974 HLA-DQB1P01920 261 aa11.42□□□□□ -0.58
UBE2D3-228ENST00000508974 SAA1P0DJI8 122 aaPredicted RBP11.42□□□□□ -0.58
UBE2D3-228ENST00000508974 UBE2KP61086 200 aa11.42□□□□□ -0.58
UBE2D3-228ENST00000508974 MRGPRG-AS1Q2M3A8 158 aa11.42□□□□□ -0.58
UBE2D3-228ENST00000508974 VKORC1L1Q8N0U8 176 aa11.42□□□□□ -0.58
UBE2D3-228ENST00000508974 TCTEX1D2Q8WW35 142 aa11.42□□□□□ -0.58
UBE2D3-228ENST00000508974 RHOVQ96L33 236 aa11.42□□□□□ -0.58
UBE2D3-228ENST00000508974 B9D2Q9BPU9 175 aa11.42□□□□□ -0.58
UBE2D3-228ENST00000508974 TAS2R8Q9NYW2 309 aa11.42□□□□□ -0.58
UBE2D3-228ENST00000508974 ZNF256Q9Y2P7 627 aaPredicted RBP11.42□□□□□ -0.58
UBE2D3-228ENST00000508974 RBMX2Q9Y388 322 aaKnown RBP11.42□□□□□ -0.58
UBE2D3-228ENST00000508974 MPPED1O15442 326 aa11.41□□□□□ -0.58
UBE2D3-228ENST00000508974 TNFSF12O43508 249 aa11.41□□□□□ -0.58
UBE2D3-228ENST00000508974 IGLV2-14P01704 120 aa11.41□□□□□ -0.58
UBE2D3-228ENST00000508974 HSPB1P04792 205 aaKnown RBP11.41□□□□□ -0.58
UBE2D3-228ENST00000508974 SCAND1P57086 179 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms