RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 HIST1H2BDP58876 126 aa9.08□□□□□ -0.96
LIN54-207ENST00000508171 HIST1H2BCP62807 126 aa9.08□□□□□ -0.96
LIN54-207ENST00000508171 HIST2H2BEQ16778 126 aa9.08□□□□□ -0.96
LIN54-207ENST00000508171 MORN2Q502X0 79 aa9.08□□□□□ -0.96
LIN54-207ENST00000508171 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.08□□□□□ -0.96
LIN54-207ENST00000508171 SPNS3Q6ZMD2 512 aa9.08□□□□□ -0.96
LIN54-207ENST00000508171 GCSAMQ8N6F7 178 aa9.08□□□□□ -0.96
LIN54-207ENST00000508171 HIST1H2BHQ93079 126 aa9.08□□□□□ -0.96
LIN54-207ENST00000508171 R3HDM4Q96D70 268 aa9.08□□□□□ -0.96
LIN54-207ENST00000508171 HIST1H2BNQ99877 126 aa9.08□□□□□ -0.96
LIN54-207ENST00000508171 HIST1H2BMQ99879 126 aa9.08□□□□□ -0.96
LIN54-207ENST00000508171 NPCDR1Q9BY65 106 aa9.08□□□□□ -0.96
LIN54-207ENST00000508171 GSN-AS1Q9NRJ2 163 aa9.08□□□□□ -0.96
LIN54-207ENST00000508171 GNG12Q9UBI6 72 aa9.08□□□□□ -0.96
LIN54-207ENST00000508171 DSCAML1Q8TD84 2053 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 ZNF292O60281 2723 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 CYB5R3P00387 301 aaPredicted RBP9.07□□□□□ -0.96
LIN54-207ENST00000508171 DUTP33316 252 aaKnown RBP9.07□□□□□ -0.96
LIN54-207ENST00000508171 GPR12P47775 334 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 B2MP61769 119 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 HTD2P86397 168 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 MEF2BQ02080 365 aaPredicted RBP9.07□□□□□ -0.96
LIN54-207ENST00000508171 PNRC1Q12796 327 aaPredicted RBP9.07□□□□□ -0.96
LIN54-207ENST00000508171 ATP6V1FQ16864 119 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 RPL39P5Q59GN2 51 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 FAM201AQ5SY85 155 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 VHLLQ6RSH7 139 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 ZNF251Q9BRH9 671 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 MRPL37Q9BZE1 423 aaKnown RBP9.07□□□□□ -0.96
LIN54-207ENST00000508171 ZMAT5Q9UDW3 170 aaKnown RBP9.07□□□□□ -0.96
LIN54-207ENST00000508171 ADGRG4Q8IZF6 3080 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 DCHS1Q96JQ0 3298 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 A0A1B0GWJ7 208 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 SRRM5B3KS81 715 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 CLDN34H7C241 214 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 ADH4P08319 380 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 MDKP21741 143 aaPredicted RBP9.07□□□□□ -0.96
LIN54-207ENST00000508171 TUBG1P23258 451 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 S100A12P80511 92 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 P2RY6Q15077 328 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 GFI1BQ5VTD9 330 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 C1orf229Q6ZS94 237 aaPredicted RBP9.07□□□□□ -0.96
LIN54-207ENST00000508171 Q8TCH9 128 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 ABHD5Q8WTS1 349 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 RAB24Q969Q5 203 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 RPUSD4Q96CM3 377 aaKnown RBP9.07□□□□□ -0.96
LIN54-207ENST00000508171 FAM210BQ96KR6 192 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 OR2V2Q96R30 315 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 SMIM7Q9BQ49 75 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 TUBG2Q9NRH3 451 aa9.07□□□□□ -0.96
LIN54-207ENST00000508171 C15orf62A8K5M9 175 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 LINC00587B1AMM8 73 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 M0R1B8 84 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 IFNA1P01562 189 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 FABP1P07148 127 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 SELLP14151 372 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 EDDM3BP56851 147 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 ADIRFQ15847 76 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 C4orf17Q53FE4 359 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 GCSAMLQ5JQS6 135 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 ZNF474Q6S9Z5 364 aaPredicted RBP9.06□□□□□ -0.96
LIN54-207ENST00000508171 MOGAT3Q86VF5 341 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 FAM90A1Q86YD7 464 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 TCTEX1D1Q8N7M0 179 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 LEAP2Q969E1 77 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 S100PBPQ96BU1 408 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 TCEAL7Q9BRU2 100 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 TMEM242Q9NWH2 141 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 BSNQ9UPA5 3926 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 RIF1Q5UIP0 2472 aaKnown RBP9.06□□□□□ -0.96
LIN54-207ENST00000508171 CTXND1A0A1B0GTU2 59 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 GZMHP20718 246 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 RND2P52198 227 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 LOXL3P58215 753 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 Q8N7P7 452 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 FRZBQ92765 325 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 CIB3Q96Q77 187 aaPredicted RBP9.06□□□□□ -0.96
LIN54-207ENST00000508171 MIOXQ9UGB7 285 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 WASF3Q9UPY6 502 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 LAMP3Q9UQV4 416 aa9.06□□□□□ -0.96
LIN54-207ENST00000508171 ROS1P08922 2347 aa9.05□□□□□ -0.96
LIN54-207ENST00000508171 TRAV3A0A0B4J244 114 aa9.05□□□□□ -0.96
LIN54-207ENST00000508171 M0R1X1 148 aa9.05□□□□□ -0.96
LIN54-207ENST00000508171 SPRY3O43610 288 aa9.05□□□□□ -0.96
LIN54-207ENST00000508171 CDX1P47902 265 aaPredicted RBP9.05□□□□□ -0.96
LIN54-207ENST00000508171 PSMB3P49720 205 aa9.05□□□□□ -0.96
LIN54-207ENST00000508171 GNB2P62879 340 aa9.05□□□□□ -0.96
LIN54-207ENST00000508171 PMS2P11Q13670 270 aa9.05□□□□□ -0.96
LIN54-207ENST00000508171 VWC2Q2TAL6 325 aa9.05□□□□□ -0.96
LIN54-207ENST00000508171 PDZD11Q5EBL8 140 aa9.05□□□□□ -0.96
LIN54-207ENST00000508171 ZNF709Q8N972 641 aa9.05□□□□□ -0.96
LIN54-207ENST00000508171 OR4F5Q8NH21 305 aa9.05□□□□□ -0.96
LIN54-207ENST00000508171 OR4F4Q96R69 305 aa9.05□□□□□ -0.96
LIN54-207ENST00000508171 OR6C3Q9NZP0 311 aa9.05□□□□□ -0.96
LIN54-207ENST00000508171 SLC31A2O15432 143 aa9.05□□□□□ -0.96
LIN54-207ENST00000508171 PAGE4O60829 102 aa9.05□□□□□ -0.96
LIN54-207ENST00000508171 TRGC1P0CF51 173 aa9.05□□□□□ -0.96
LIN54-207ENST00000508171 BMP5P22003 454 aa9.05□□□□□ -0.96
LIN54-207ENST00000508171 PAX5Q02548 391 aa9.05□□□□□ -0.96
LIN54-207ENST00000508171 TMEM241Q24JQ0 296 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms