RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 TUBG2Q9NRH3 451 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 TMEM106BQ9NUM4 274 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 ZNF586Q9NXT0 402 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 ELOVL5Q9NYP7 299 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 IL36BQ9NZH7 164 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 POLR3KQ9Y2Y1 108 aaPredicted RBP4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 GOLT1BQ9Y3E0 138 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 SHANK1Q9Y566 2161 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 HTTP42858 3142 aa4.17□□□□□ -1.74
HMGB3P16-201ENST00000508037 MYO7BQ6PIF6 2116 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 TNRC6AQ8NDV7 1962 aaKnown RBP4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 UTRNP46939 3433 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 UNC13CQ8NB66 2214 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 LY6G6EA0A0G2JKS1 128 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 KRTAP9-6A0A140TA67 174 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 ODAMA1E959 279 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 MARCH11A6NNE9 402 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 PMS2P5A8MQ11 134 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 FAM166BA8MTA8 275 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 SIRPB1O00241 398 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 CDIPTO14735 213 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 DLEU1O43261 78 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 SPINT2O43291 252 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 KLF7O75840 302 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 TNFSF15O95150 251 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 NDUFB4O95168 129 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 HAND1O96004 215 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 NGFP01138 241 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 REG1AP05451 166 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 ADH4P08319 380 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 AREGP15514 252 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 GCH1P30793 250 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 BRS3P32247 399 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 NTF4P34130 210 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 RPL29P47914 159 aaKnown RBP4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 TMPRSS3P57727 454 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 ERVK11-1P61568 191 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 RHOBP62745 196 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 HTD2P86397 168 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 PMP22Q01453 160 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 ZNF90Q03938 601 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 SSPNQ14714 243 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 RTP5Q14D33 572 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 OR1C1Q15619 314 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 IZUMO4Q1ZYL8 232 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 RPEL1Q2QD12 228 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 AARDQ4LEZ3 155 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 OR10J3Q5JRS4 329 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 TEX38Q6PEX7 206 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 TOMM20LQ6UXN7 152 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 BAGE3Q86Y29 109 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 BAGE2Q86Y30 109 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 GCNT2Q8N0V5 402 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 BATF2Q8N1L9 274 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 PRR18Q8N4B5 295 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 KLHDC1Q8N7A1 406 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 SIGLECL1Q8N7X8 197 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 OR5T1Q8NG75 326 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 IFI44Q8TCB0 444 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 RNF2Q99496 336 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 ZPBPQ9BS86 351 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 SFXN3Q9BWM7 321 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 QTRT1Q9BXR0 403 aaKnown RBP4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 GNB1LQ9BYB4 327 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 SAMD10Q9BYL1 202 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 KRTAP9-2Q9BYQ4 174 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 OR2D2Q9H210 308 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 UBE2ZQ9H832 354 aaPredicted RBP4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 CBLN4Q9NTU7 201 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 IL36RNQ9UBH0 155 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 WNT16Q9UBV4 365 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 CLN8Q9UBY8 286 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 U3KQA8 63 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 KIAA1549Q9HCM3 1950 aa4.16□□□□□ -1.74
HMGB3P16-201ENST00000508037 TMEM265A0A087WTH1 108 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 SAA2-SAA4A0A096LPE2 208 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 TRGV10A0A0A0MS01 117 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 A0A0G2JMM0 328 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 A0A1W2PPB8 328 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 A0A1W2PRS3 328 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 C20orf202A1L168 122 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 KIR3DP1A8MWS1 328 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 FNDC10F2Z333 226 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 IFNL4K9M1U5 179 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 FCN1O00602 326 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 RBFOX2O43251 390 aaKnown RBP eCLIP4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 ZG16O60844 167 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 NEURL1O76050 574 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 S1PR2O95136 353 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 IGHV3-9P01782 118 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 HBZP02008 142 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 OR5G3P0C626 314 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 OR10J4P0C629 311 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 RFPL3SP0C7P2 107 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 STAG3L2P0CL84 134 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 STAG3L3P0CL85 134 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 CA6P23280 308 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 G0S2P27469 103 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 CD82P27701 267 aa4.15□□□□□ -1.75
HMGB3P16-201ENST00000508037 OTX2P32243 289 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms