RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 OR10A3P58181 314 aa11.13□□□□□ -0.63
HMGCS1-203ENST00000507004 IGSF11Q5DX21 431 aa11.13□□□□□ -0.63
HMGCS1-203ENST00000507004 UBE2UQ5VVX9 321 aa11.13□□□□□ -0.63
HMGCS1-203ENST00000507004 MS4A10Q96PG2 267 aa11.13□□□□□ -0.63
HMGCS1-203ENST00000507004 ATG5Q9H1Y0 275 aa11.13□□□□□ -0.63
HMGCS1-203ENST00000507004 STUB1Q9UNE7 303 aa11.13□□□□□ -0.63
HMGCS1-203ENST00000507004 A0A075B6Q4 140 aa11.12□□□□□ -0.63
HMGCS1-203ENST00000507004 TMEM127O75204 238 aa11.12□□□□□ -0.63
HMGCS1-203ENST00000507004 IGLV2-23P01705 113 aa11.12□□□□□ -0.63
HMGCS1-203ENST00000507004 IGHV3-11P01762 117 aa11.12□□□□□ -0.63
HMGCS1-203ENST00000507004 GP9P14770 177 aa11.12□□□□□ -0.63
HMGCS1-203ENST00000507004 CD36P16671 472 aa11.12□□□□□ -0.63
HMGCS1-203ENST00000507004 UBE2KP61086 200 aa11.12□□□□□ -0.63
HMGCS1-203ENST00000507004 C22orf42Q6IC83 251 aa11.12□□□□□ -0.63
HMGCS1-203ENST00000507004 H1FOOQ8IZA3 346 aaPredicted RBP11.12□□□□□ -0.63
HMGCS1-203ENST00000507004 BVESQ8NE79 360 aa11.12□□□□□ -0.63
HMGCS1-203ENST00000507004 ALX4Q9H161 411 aaPredicted RBP11.12□□□□□ -0.63
HMGCS1-203ENST00000507004 SSR3Q9UNL2 185 aa11.12□□□□□ -0.63
HMGCS1-203ENST00000507004 MRPS7Q9Y2R9 242 aaKnown RBP11.12□□□□□ -0.63
HMGCS1-203ENST00000507004 PRELID3BQ9Y3B1 194 aa11.12□□□□□ -0.63
HMGCS1-203ENST00000507004 ACTL6BO94805 426 aa11.11□□□□□ -0.63
HMGCS1-203ENST00000507004 DUTP33316 252 aaKnown RBP11.11□□□□□ -0.63
HMGCS1-203ENST00000507004 HACD4Q5VWC8 232 aa11.11□□□□□ -0.63
HMGCS1-203ENST00000507004 ANKRD13BQ86YJ7 626 aa11.11□□□□□ -0.63
HMGCS1-203ENST00000507004 ZNF645Q8N7E2 425 aa11.11□□□□□ -0.63
HMGCS1-203ENST00000507004 PHB2Q99623 299 aa11.11□□□□□ -0.63
HMGCS1-203ENST00000507004 TINAGL1Q9GZM7 467 aaPredicted RBP11.11□□□□□ -0.63
HMGCS1-203ENST00000507004 DNAH9Q9NYC9 4486 aa11.11□□□□□ -0.63
HMGCS1-203ENST00000507004 SHISA3A0PJX4 238 aa11.1□□□□□ -0.63
HMGCS1-203ENST00000507004 H0Y980 276 aa11.1□□□□□ -0.63
HMGCS1-203ENST00000507004 C3orf84H3BNL1 204 aa11.1□□□□□ -0.63
HMGCS1-203ENST00000507004 SPNP16150 400 aa11.1□□□□□ -0.63
HMGCS1-203ENST00000507004 PSMB9P28065 219 aa11.1□□□□□ -0.63
HMGCS1-203ENST00000507004 PLA2G7Q13093 441 aa11.1□□□□□ -0.63
HMGCS1-203ENST00000507004 CDNFQ49AH0 187 aa11.1□□□□□ -0.63
HMGCS1-203ENST00000507004 CNIH2Q6PI25 160 aa11.1□□□□□ -0.63
HMGCS1-203ENST00000507004 SLC25A42Q86VD7 318 aa11.1□□□□□ -0.63
HMGCS1-203ENST00000507004 VSTM2AQ8TAG5 236 aa11.1□□□□□ -0.63
HMGCS1-203ENST00000507004 CASTOR1Q8WTX7 329 aa11.1□□□□□ -0.63
HMGCS1-203ENST00000507004 DDB2Q92466 427 aa11.1□□□□□ -0.63
HMGCS1-203ENST00000507004 SPIN2AQ99865 258 aa11.1□□□□□ -0.63
HMGCS1-203ENST00000507004 SPIN2BQ9BPZ2 258 aa11.1□□□□□ -0.63
HMGCS1-203ENST00000507004 TXNL4BQ9NX01 149 aaKnown RBP11.1□□□□□ -0.63
HMGCS1-203ENST00000507004 ZNF230Q9UIE0 474 aaPredicted RBP11.1□□□□□ -0.63
HMGCS1-203ENST00000507004 OR2W1Q9Y3N9 320 aa11.1□□□□□ -0.63
HMGCS1-203ENST00000507004 CRYZL1O95825 349 aa11.09□□□□□ -0.63
HMGCS1-203ENST00000507004 OR9G9P0C7N8 305 aa11.09□□□□□ -0.63
HMGCS1-203ENST00000507004 LINC00205P59089 165 aa11.09□□□□□ -0.63
HMGCS1-203ENST00000507004 GNG2P59768 71 aa11.09□□□□□ -0.63
HMGCS1-203ENST00000507004 PRSS8Q16651 343 aa11.09□□□□□ -0.63
HMGCS1-203ENST00000507004 MMD2Q8IY49 270 aa11.09□□□□□ -0.63
HMGCS1-203ENST00000507004 SPARTQ8N0X7 666 aa11.09□□□□□ -0.63
HMGCS1-203ENST00000507004 OR5T1Q8NG75 326 aa11.09□□□□□ -0.63
HMGCS1-203ENST00000507004 HSD17B10Q99714 261 aaKnown RBP11.09□□□□□ -0.63
HMGCS1-203ENST00000507004 AIFM2Q9BRQ8 373 aa11.09□□□□□ -0.63
HMGCS1-203ENST00000507004 ZMAT4Q9H898 229 aa11.09□□□□□ -0.63
HMGCS1-203ENST00000507004 SIGLEC8Q9NYZ4 499 aa11.09□□□□□ -0.63
HMGCS1-203ENST00000507004 PEF1Q9UBV8 284 aaKnown RBP11.09□□□□□ -0.63
HMGCS1-203ENST00000507004 A0A0A6YYH2 397 aa11.08□□□□□ -0.64
HMGCS1-203ENST00000507004 A0A0B4J203 849 aa11.08□□□□□ -0.64
HMGCS1-203ENST00000507004 A6NJ64 397 aa11.08□□□□□ -0.64
HMGCS1-203ENST00000507004 FAM223BA6NKX1 122 aa11.08□□□□□ -0.64
HMGCS1-203ENST00000507004 MPPED1O15442 326 aa11.08□□□□□ -0.64
HMGCS1-203ENST00000507004 IGLV1-51P01701 117 aa11.08□□□□□ -0.64
HMGCS1-203ENST00000507004 HLA-DQB1P01920 261 aa11.08□□□□□ -0.64
HMGCS1-203ENST00000507004 SSBP2P81877 361 aaPredicted RBP11.08□□□□□ -0.64
HMGCS1-203ENST00000507004 CDK10Q15131 360 aa11.08□□□□□ -0.64
HMGCS1-203ENST00000507004 MSMO1Q15800 293 aa11.08□□□□□ -0.64
HMGCS1-203ENST00000507004 ZNF343Q6P1L6 599 aa11.08□□□□□ -0.64
HMGCS1-203ENST00000507004 KCTD9Q7L273 389 aa11.08□□□□□ -0.64
HMGCS1-203ENST00000507004 FAM223AQ8IWN6 122 aa11.08□□□□□ -0.64
HMGCS1-203ENST00000507004 SGPP2Q8IWX5 399 aa11.08□□□□□ -0.64
HMGCS1-203ENST00000507004 SRSF12Q8WXF0 261 aaKnown RBP11.08□□□□□ -0.64
HMGCS1-203ENST00000507004 MAFIPQ8WZ33 124 aa11.08□□□□□ -0.64
HMGCS1-203ENST00000507004 SNAPC3Q92966 411 aa11.08□□□□□ -0.64
HMGCS1-203ENST00000507004 ST6GALNAC5Q9BVH7 336 aa11.08□□□□□ -0.64
HMGCS1-203ENST00000507004 COA4Q9NYJ1 87 aa11.08□□□□□ -0.64
HMGCS1-203ENST00000507004 ETV7Q9Y603 341 aa11.08□□□□□ -0.64
HMGCS1-203ENST00000507004 MSGN1A6NI15 193 aa11.07□□□□□ -0.64
HMGCS1-203ENST00000507004 SRRM4A7MD48 611 aaKnown RBP11.07□□□□□ -0.64
HMGCS1-203ENST00000507004 A8MZ25 164 aa11.07□□□□□ -0.64
HMGCS1-203ENST00000507004 AIREO43918 545 aa11.07□□□□□ -0.64
HMGCS1-203ENST00000507004 PJVKQ0ZLH3 352 aa11.07□□□□□ -0.64
HMGCS1-203ENST00000507004 KLF5Q13887 457 aaPredicted RBP11.07□□□□□ -0.64
HMGCS1-203ENST00000507004 TNXAQ16473 311 aa11.07□□□□□ -0.64
HMGCS1-203ENST00000507004 SFXN4Q6P4A7 337 aa11.07□□□□□ -0.64
HMGCS1-203ENST00000507004 OVCH2Q7RTZ1 564 aa11.07□□□□□ -0.64
HMGCS1-203ENST00000507004 OR9G4Q8NGQ1 327 aa11.07□□□□□ -0.64
HMGCS1-203ENST00000507004 OR4S2Q8NH73 311 aa11.07□□□□□ -0.64
HMGCS1-203ENST00000507004 ACOT12Q8WYK0 555 aa11.07□□□□□ -0.64
HMGCS1-203ENST00000507004 ASCL2Q99929 193 aa11.07□□□□□ -0.64
HMGCS1-203ENST00000507004 DCUN1D5Q9BTE7 237 aa11.07□□□□□ -0.64
HMGCS1-203ENST00000507004 RSRP1Q9BUV0 290 aa11.07□□□□□ -0.64
HMGCS1-203ENST00000507004 PEMTQ9UBM1 199 aa11.07□□□□□ -0.64
HMGCS1-203ENST00000507004 DAPK2Q9UIK4 370 aa11.07□□□□□ -0.64
HMGCS1-203ENST00000507004 ANXA10Q9UJ72 324 aa11.07□□□□□ -0.64
HMGCS1-203ENST00000507004 RBMX2Q9Y388 322 aaKnown RBP11.07□□□□□ -0.64
HMGCS1-203ENST00000507004 RRP15Q9Y3B9 282 aaKnown RBP11.07□□□□□ -0.64
HMGCS1-203ENST00000507004 TUSC2O75896 110 aa11.06□□□□□ -0.64
HMGCS1-203ENST00000507004 OR2A4O95047 310 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms