RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 TSC22D3Q99576 134 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 RASL11BQ9BPW5 248 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 MRPL20Q9BYC9 149 aaKnown RBP6.76□□□□□ -1.33
PDGFC-205ENST00000506880 AKIP1Q9NQ31 210 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 SLC35D1Q9NTN3 355 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 RNF150Q9ULK6 438 aa6.76□□□□□ -1.33
PDGFC-205ENST00000506880 H7C2Y5 167 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 AP4M1O00189 453 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 RRHO14718 337 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 PROP1O75360 226 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 IGLV2-14P01704 120 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 PMP2P02689 132 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 IGF1P05019 195 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 NQO2P16083 231 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 DLX1P56177 255 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 UBE2KP61086 200 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 TMEM267Q0VDI3 215 aaPredicted RBP6.75□□□□□ -1.33
PDGFC-205ENST00000506880 KLF9Q13886 244 aaPredicted RBP6.75□□□□□ -1.33
PDGFC-205ENST00000506880 RBMS2Q15434 407 aaKnown RBP6.75□□□□□ -1.33
PDGFC-205ENST00000506880 MMDQ15546 238 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 C5orf64Q2M2E5 130 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 AADACL3Q5VUY0 350 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 ZNF562Q6V9R5 426 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 HSD17B13Q7Z5P4 300 aaPredicted RBP6.75□□□□□ -1.33
PDGFC-205ENST00000506880 FAM219AQ8IW50 185 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 MRPL41Q8IXM3 137 aaKnown RBP6.75□□□□□ -1.33
PDGFC-205ENST00000506880 MFSD4AQ8N468 514 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 ZNF383Q8NA42 475 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 UBALD1Q8TB05 177 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 SECTM1Q8WVN6 248 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 MAFIPQ8WZ33 124 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 IL22RA2Q969J5 263 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 GALNT14Q96FL9 552 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 C19orf24Q9BVV8 132 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 PALMDQ9NP74 551 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 PLSCR3Q9NRY6 295 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 FKBP11Q9NYL4 201 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 BET1LQ9NYM9 111 aa6.75□□□□□ -1.33
PDGFC-205ENST00000506880 C14orf166Q9Y224 244 aaKnown RBP6.75□□□□□ -1.33
PDGFC-205ENST00000506880 PLXNB1O43157 2135 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 IGKV1D-13A0A0B4J2D9 117 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 MDFIC2A0A1B0GVS7 189 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 A0A1W2PPE3 182 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 DUXBA0A1W2PPF3 345 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 H0Y980 276 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 H3BUA1 57 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 ARPC1BO15143 372 aaKnown RBP6.74□□□□□ -1.33
PDGFC-205ENST00000506880 SHOXO15266 292 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 AMY2AP04746 511 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 ZNF735P0CB33 412 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 IGKV1-13P0DP09 117 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 PTHLHP12272 177 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 ANXA3P12429 323 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 ERVK-16P61578 105 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 SLC35B1P78383 322 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 DHODHQ02127 395 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 KRTAP24-1Q3LI83 254 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 ABCA11PQ4W5N1 156 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 RPL39P5Q59GN2 51 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 LIN54Q6MZP7 749 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 SHISA2Q6UWI4 295 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 SLC25A42Q86VD7 318 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 MMD2Q8IY49 270 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 Q8N9W7 124 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 OR4C16Q8NGL9 310 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 HARBI1Q96MB7 349 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 ZNF747Q9BV97 191 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 WNT10AQ9GZT5 417 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 PARP12Q9H0J9 701 aaKnown RBP6.74□□□□□ -1.33
PDGFC-205ENST00000506880 ALX4Q9H161 411 aaPredicted RBP6.74□□□□□ -1.33
PDGFC-205ENST00000506880 SLC2A9Q9NRM0 540 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 KCNIP3Q9Y2W7 256 aa6.74□□□□□ -1.33
PDGFC-205ENST00000506880 CUBNO60494 3623 aa6.73□□□□□ -1.33
PDGFC-205ENST00000506880 MEIS3P1A6NDR6 274 aa6.73□□□□□ -1.33
PDGFC-205ENST00000506880 NCBP2LA6PVI3 153 aaKnown RBP6.73□□□□□ -1.33
PDGFC-205ENST00000506880 MPPED1O15442 326 aa6.73□□□□□ -1.33
PDGFC-205ENST00000506880 PGLYRP1O75594 196 aaPredicted RBP6.73□□□□□ -1.33
PDGFC-205ENST00000506880 LY86O95711 162 aa6.73□□□□□ -1.33
PDGFC-205ENST00000506880 IGHV3-7P01780 117 aa6.73□□□□□ -1.33
PDGFC-205ENST00000506880 VDAC2P45880 294 aaPredicted RBP6.73□□□□□ -1.33
PDGFC-205ENST00000506880 REG1BP48304 166 aa6.73□□□□□ -1.33
PDGFC-205ENST00000506880 PROK1P58294 105 aa6.73□□□□□ -1.33
PDGFC-205ENST00000506880 RPS16P62249 146 aaKnown RBP6.73□□□□□ -1.33
PDGFC-205ENST00000506880 DIAPH2-AS1Q14236 149 aa6.73□□□□□ -1.33
PDGFC-205ENST00000506880 AKIRIN2Q53H80 203 aa6.73□□□□□ -1.33
PDGFC-205ENST00000506880 TMEM128Q5BJH2 165 aa6.73□□□□□ -1.33
PDGFC-205ENST00000506880 UTF1Q5T230 341 aa6.73□□□□□ -1.33
PDGFC-205ENST00000506880 MZT2BQ6NZ67 158 aa6.73□□□□□ -1.33
PDGFC-205ENST00000506880 CCBE1Q6UXH8 406 aaPredicted RBP6.73□□□□□ -1.33
PDGFC-205ENST00000506880 IDO2Q6ZQW0 420 aa6.73□□□□□ -1.33
PDGFC-205ENST00000506880 ZNF818PQ6ZRF7 136 aa6.73□□□□□ -1.33
PDGFC-205ENST00000506880 Q6ZSV7 163 aa6.73□□□□□ -1.33
PDGFC-205ENST00000506880 PPP1R27Q86WC6 154 aa6.73□□□□□ -1.33
PDGFC-205ENST00000506880 RNF152Q8N8N0 203 aa6.73□□□□□ -1.33
PDGFC-205ENST00000506880 LINC01006Q8NI28 216 aa6.73□□□□□ -1.33
PDGFC-205ENST00000506880 TCTEX1D2Q8WW35 142 aa6.73□□□□□ -1.33
PDGFC-205ENST00000506880 TINAGL1Q9GZM7 467 aaPredicted RBP6.73□□□□□ -1.33
PDGFC-205ENST00000506880 FXYD6Q9H0Q3 95 aa6.73□□□□□ -1.33
PDGFC-205ENST00000506880 ZNF702PQ9H963 129 aa6.73□□□□□ -1.33
PDGFC-205ENST00000506880 GPR132Q9UNW8 380 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms