RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 THBS3P49746 956 aa7.04□□□□□ -1.28
SCAMP1-202ENST00000506858 PIGPP57054 158 aa7.04□□□□□ -1.28
SCAMP1-202ENST00000506858 AP3S2P59780 193 aa7.04□□□□□ -1.28
SCAMP1-202ENST00000506858 RPS16P62249 146 aaKnown RBP7.04□□□□□ -1.28
SCAMP1-202ENST00000506858 SCGB2A2Q13296 93 aa7.04□□□□□ -1.28
SCAMP1-202ENST00000506858 C16orf87Q6PH81 154 aa7.04□□□□□ -1.28
SCAMP1-202ENST00000506858 TMED4Q7Z7H5 227 aa7.04□□□□□ -1.28
SCAMP1-202ENST00000506858 TBC1D26Q86UD7 250 aa7.04□□□□□ -1.28
SCAMP1-202ENST00000506858 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.04□□□□□ -1.28
SCAMP1-202ENST00000506858 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.04□□□□□ -1.28
SCAMP1-202ENST00000506858 CLCC1Q96S66 551 aa7.04□□□□□ -1.28
SCAMP1-202ENST00000506858 PRRT1Q99946 306 aa7.04□□□□□ -1.28
SCAMP1-202ENST00000506858 SLC2A9Q9NRM0 540 aa7.04□□□□□ -1.28
SCAMP1-202ENST00000506858 TPSG1Q9NRR2 321 aa7.04□□□□□ -1.28
SCAMP1-202ENST00000506858 SCP2D1Q9UJQ7 156 aa7.04□□□□□ -1.28
SCAMP1-202ENST00000506858 GPR132Q9UNW8 380 aa7.04□□□□□ -1.28
SCAMP1-202ENST00000506858 WASHC3Q9Y3C0 194 aa7.04□□□□□ -1.28
SCAMP1-202ENST00000506858 LINC01548A6NM66 108 aa7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 FCN1O00602 326 aa7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 MOSP00540 346 aa7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 IFNA2P01563 188 aa7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 SPNP16150 400 aa7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 AKR1C4P17516 323 aa7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 FAUP35544 74 aaKnown RBP7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 DYNLT3P51808 116 aa7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 UCP3P55916 312 aa7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 RAB25P57735 213 aa7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 TMEM95Q3KNT9 176 aa7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 KRTAP24-1Q3LI83 254 aa7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 ABCA11PQ4W5N1 156 aa7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 ZNF585BQ52M93 769 aa7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 C9orf152Q5JTZ5 239 aa7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 FAM71F2Q6NXP2 309 aa7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 SSX9Q7RTT3 188 aa7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 SLC38A6Q8IZM9 456 aa7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 SPAG16Q8N0X2 631 aa7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 Q8N6K4 173 aa7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 OR2T10Q8NGZ9 312 aa7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 OR5R1Q8NH85 324 aa7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 TMEM230Q96A57 120 aa7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 RBM14Q96PK6 669 aaKnown RBP7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 GHITMQ9H3K2 345 aa7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 FBXL15Q9H469 300 aa7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 SLC2A8Q9NY64 477 aa7.03□□□□□ -1.28
SCAMP1-202ENST00000506858 TRAV6A0A075B6T7 132 aa7.02□□□□□ -1.29
SCAMP1-202ENST00000506858 MPPED1O15442 326 aa7.02□□□□□ -1.29
SCAMP1-202ENST00000506858 TXNL1O43396 289 aa7.02□□□□□ -1.29
SCAMP1-202ENST00000506858 SLC25A17O43808 307 aa7.02□□□□□ -1.29
SCAMP1-202ENST00000506858 S1PR2O95136 353 aa7.02□□□□□ -1.29
SCAMP1-202ENST00000506858 APOA2P02652 100 aa7.02□□□□□ -1.29
SCAMP1-202ENST00000506858 CTSDP07339 412 aaPredicted RBP7.02□□□□□ -1.29
SCAMP1-202ENST00000506858 RNASE1P07998 156 aaKnown RBP7.02□□□□□ -1.29
SCAMP1-202ENST00000506858 MYOD1P15172 320 aa7.02□□□□□ -1.29
SCAMP1-202ENST00000506858 ANXA7P20073 488 aaKnown RBP7.02□□□□□ -1.29
SCAMP1-202ENST00000506858 LPAR6P43657 344 aa7.02□□□□□ -1.29
SCAMP1-202ENST00000506858 ARHGDIBP52566 201 aa7.02□□□□□ -1.29
SCAMP1-202ENST00000506858 PJVKQ0ZLH3 352 aa7.02□□□□□ -1.29
SCAMP1-202ENST00000506858 EBI3Q14213 229 aa7.02□□□□□ -1.29
SCAMP1-202ENST00000506858 MMDQ15546 238 aa7.02□□□□□ -1.29
SCAMP1-202ENST00000506858 AANATQ16613 207 aa7.02□□□□□ -1.29
SCAMP1-202ENST00000506858 IZUMO4Q1ZYL8 232 aa7.02□□□□□ -1.29
SCAMP1-202ENST00000506858 THNSL2Q86YJ6 484 aa7.02□□□□□ -1.29
SCAMP1-202ENST00000506858 CMTM1Q8IZ96 169 aa7.02□□□□□ -1.29
SCAMP1-202ENST00000506858 FLYWCH2Q96CP2 140 aaKnown RBP7.02□□□□□ -1.29
SCAMP1-202ENST00000506858 AKR1E2Q96JD6 320 aa7.02□□□□□ -1.29
SCAMP1-202ENST00000506858 TP53RKQ96S44 253 aa7.02□□□□□ -1.29
SCAMP1-202ENST00000506858 HSD17B10Q99714 261 aaKnown RBP7.02□□□□□ -1.29
SCAMP1-202ENST00000506858 COPZ2Q9P299 210 aa7.02□□□□□ -1.29
SCAMP1-202ENST00000506858 LINC00527Q9UJ94 153 aa7.02□□□□□ -1.29
SCAMP1-202ENST00000506858 POMT1Q9Y6A1 747 aa7.02□□□□□ -1.29
SCAMP1-202ENST00000506858 TRAV3A0A0B4J244 114 aa7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 ADARB2-AS1A8MUL3 147 aa7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 ARPC1BO15143 372 aaKnown RBP7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 SHOXO15266 292 aa7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 SLC22A5O76082 557 aa7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 OR2F2O95006 317 aa7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 IGLV2-23P01705 113 aa7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 MC5RP33032 325 aa7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 PSG5Q15238 335 aa7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 DHRS7BQ6IAN0 325 aaPredicted RBP7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 LPCAT3Q6P1A2 487 aa7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 ZNF66Q6ZN08 573 aa7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 Q6ZSV7 163 aa7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 TMEM86BQ8N661 226 aa7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 Q8N9W7 124 aa7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 POC5Q8NA72 575 aa7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 ZBTB34Q8NCN2 500 aa7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 ZFAND1Q8TCF1 268 aa7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 ADTRPQ96IZ2 230 aa7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 HARBI1Q96MB7 349 aa7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 C1RLQ9NZP8 487 aa7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 C14orf166Q9Y224 244 aaKnown RBP7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 TEX13DA0A0J9YY54 714 aaPredicted RBP7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 FAM240BA0A1B0GVZ2 78 aa7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 CENPXA8MT69 81 aa7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 CLDN34H7C241 214 aa7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 TRIM77I1YAP6 450 aa7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 NDUFB6O95139 128 aa7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 IGKV1-39P01597 117 aa7.01□□□□□ -1.29
SCAMP1-202ENST00000506858 IGKV1D-39P04432 117 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms