RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 SAMD12Q8N8I0 201 aa12.14□□□□□ -0.47
CLDND1-211ENST00000506575 LFNGQ8NES3 379 aa12.14□□□□□ -0.47
CLDND1-211ENST00000506575 GRPEL2Q8TAA5 225 aa12.14□□□□□ -0.47
CLDND1-211ENST00000506575 TPSG1Q9NRR2 321 aa12.14□□□□□ -0.47
CLDND1-211ENST00000506575 PRELID3BQ9Y3B1 194 aa12.14□□□□□ -0.47
CLDND1-211ENST00000506575 TRIM64CA6NLI5 447 aa12.13□□□□□ -0.47
CLDND1-211ENST00000506575 LINC00473A8K010 186 aa12.13□□□□□ -0.47
CLDND1-211ENST00000506575 TUSC2O75896 110 aa12.13□□□□□ -0.47
CLDND1-211ENST00000506575 CRYZL1O95825 349 aa12.13□□□□□ -0.47
CLDND1-211ENST00000506575 IGLV2-23P01705 113 aa12.13□□□□□ -0.47
CLDND1-211ENST00000506575 HOXD3P31249 432 aaPredicted RBP12.13□□□□□ -0.47
CLDND1-211ENST00000506575 VMA21Q3ZAQ7 101 aa12.13□□□□□ -0.47
CLDND1-211ENST00000506575 C19orf54Q5BKX5 351 aa12.13□□□□□ -0.47
CLDND1-211ENST00000506575 KCTD9Q7L273 389 aa12.13□□□□□ -0.47
CLDND1-211ENST00000506575 HOGA1Q86XE5 327 aa12.13□□□□□ -0.47
CLDND1-211ENST00000506575 GVQW1Q8N7I0 195 aa12.13□□□□□ -0.47
CLDND1-211ENST00000506575 OR11H1Q8NG94 326 aa12.13□□□□□ -0.47
CLDND1-211ENST00000506575 OR5B12Q96R08 314 aa12.13□□□□□ -0.47
CLDND1-211ENST00000506575 FUNDC2Q9BWH2 189 aa12.13□□□□□ -0.47
CLDND1-211ENST00000506575 GNB4Q9HAV0 340 aa12.13□□□□□ -0.47
CLDND1-211ENST00000506575 DNAH3Q8TD57 4116 aa12.13□□□□□ -0.47
CLDND1-211ENST00000506575 I3L521 148 aa12.12□□□□□ -0.47
CLDND1-211ENST00000506575 XRCC3O43542 346 aa12.12□□□□□ -0.47
CLDND1-211ENST00000506575 SOX15O60248 233 aa12.12□□□□□ -0.47
CLDND1-211ENST00000506575 RUNX1Q01196 453 aa12.12□□□□□ -0.47
CLDND1-211ENST00000506575 TMEM69Q5SWH9 247 aa12.12□□□□□ -0.47
CLDND1-211ENST00000506575 OR1N2Q8NGR9 330 aa12.12□□□□□ -0.47
CLDND1-211ENST00000506575 OSR1Q8TAX0 266 aaPredicted RBP12.12□□□□□ -0.47
CLDND1-211ENST00000506575 DDB2Q92466 427 aa12.12□□□□□ -0.47
CLDND1-211ENST00000506575 SLC25A46Q96AG3 418 aa12.12□□□□□ -0.47
CLDND1-211ENST00000506575 KCTD12Q96CX2 325 aaKnown RBP12.12□□□□□ -0.47
CLDND1-211ENST00000506575 DCUN1D5Q9BTE7 237 aa12.12□□□□□ -0.47
CLDND1-211ENST00000506575 IFT46Q9NQC8 304 aa12.12□□□□□ -0.47
CLDND1-211ENST00000506575 ZMAT5Q9UDW3 170 aaKnown RBP12.12□□□□□ -0.47
CLDND1-211ENST00000506575 MRPS7Q9Y2R9 242 aaKnown RBP12.12□□□□□ -0.47
CLDND1-211ENST00000506575 RBMX2Q9Y388 322 aaKnown RBP12.12□□□□□ -0.47
CLDND1-211ENST00000506575 IGKV1D-13A0A0B4J2D9 117 aa12.11□□□□□ -0.47
CLDND1-211ENST00000506575 ARPC1BO15143 372 aaKnown RBP12.11□□□□□ -0.47
CLDND1-211ENST00000506575 FCGR3BO75015 233 aa12.11□□□□□ -0.47
CLDND1-211ENST00000506575 FCER2P06734 321 aa12.11□□□□□ -0.47
CLDND1-211ENST00000506575 OR8U8P0C7N1 319 aa12.11□□□□□ -0.47
CLDND1-211ENST00000506575 IGKV1-13P0DP09 117 aa12.11□□□□□ -0.47
CLDND1-211ENST00000506575 PTHLHP12272 177 aa12.11□□□□□ -0.47
CLDND1-211ENST00000506575 FCGR2CP31995 323 aa12.11□□□□□ -0.47
CLDND1-211ENST00000506575 UBE2KP61086 200 aa12.11□□□□□ -0.47
CLDND1-211ENST00000506575 VBP1P61758 197 aa12.11□□□□□ -0.47
CLDND1-211ENST00000506575 NCS1P62166 190 aa12.11□□□□□ -0.47
CLDND1-211ENST00000506575 ZNF616Q08AN1 781 aa12.11□□□□□ -0.47
CLDND1-211ENST00000506575 PJVKQ0ZLH3 352 aa12.11□□□□□ -0.47
CLDND1-211ENST00000506575 FHL3Q13643 280 aa12.11□□□□□ -0.47
CLDND1-211ENST00000506575 KIAA0141Q14154 515 aaPredicted RBP12.11□□□□□ -0.47
CLDND1-211ENST00000506575 OR13F1Q8NGS4 319 aa12.11□□□□□ -0.47
CLDND1-211ENST00000506575 CASTOR1Q8WTX7 329 aa12.11□□□□□ -0.47
CLDND1-211ENST00000506575 MS4A10Q96PG2 267 aa12.11□□□□□ -0.47
CLDND1-211ENST00000506575 HSD17B10Q99714 261 aaKnown RBP12.11□□□□□ -0.47
CLDND1-211ENST00000506575 SLA2Q9H6Q3 261 aa12.11□□□□□ -0.47
CLDND1-211ENST00000506575 ZNF355PQ9NSJ1 428 aa12.11□□□□□ -0.47
CLDND1-211ENST00000506575 MEIS3P1A6NDR6 274 aa12.1□□□□□ -0.47
CLDND1-211ENST00000506575 SRRM4A7MD48 611 aaKnown RBP12.1□□□□□ -0.47
CLDND1-211ENST00000506575 CRYGBP07316 175 aa12.1□□□□□ -0.47
CLDND1-211ENST00000506575 TPPP2P59282 170 aa12.1□□□□□ -0.47
CLDND1-211ENST00000506575 KRTAP10-11P60412 298 aa12.1□□□□□ -0.47
CLDND1-211ENST00000506575 EGFEM1PQ0D2K5 195 aa12.1□□□□□ -0.47
CLDND1-211ENST00000506575 OR2B11Q5JQS5 317 aa12.1□□□□□ -0.47
CLDND1-211ENST00000506575 TEX45Q8NA69 505 aa12.1□□□□□ -0.47
CLDND1-211ENST00000506575 SECTM1Q8WVN6 248 aa12.1□□□□□ -0.47
CLDND1-211ENST00000506575 TCTEX1D2Q8WW35 142 aa12.1□□□□□ -0.47
CLDND1-211ENST00000506575 PHB2Q99623 299 aa12.1□□□□□ -0.47
CLDND1-211ENST00000506575 CREBL2O60519 120 aaPredicted RBP12.09□□□□□ -0.47
CLDND1-211ENST00000506575 TRGV3P03979 118 aa12.09□□□□□ -0.47
CLDND1-211ENST00000506575 LGALS1P09382 135 aaKnown RBP12.09□□□□□ -0.47
CLDND1-211ENST00000506575 AADACP22760 399 aa12.09□□□□□ -0.47
CLDND1-211ENST00000506575 TAS2R20P59543 309 aa12.09□□□□□ -0.47
CLDND1-211ENST00000506575 CDK10Q15131 360 aa12.09□□□□□ -0.47
CLDND1-211ENST00000506575 TNXAQ16473 311 aa12.09□□□□□ -0.47
CLDND1-211ENST00000506575 C9orf66Q5T8R8 295 aa12.09□□□□□ -0.47
CLDND1-211ENST00000506575 OVCH2Q7RTZ1 564 aa12.09□□□□□ -0.47
CLDND1-211ENST00000506575 POC5Q8NA72 575 aa12.09□□□□□ -0.47
CLDND1-211ENST00000506575 OR5AP2Q8NGF4 316 aa12.09□□□□□ -0.47
CLDND1-211ENST00000506575 ACOT12Q8WYK0 555 aa12.09□□□□□ -0.47
CLDND1-211ENST00000506575 TMEM68Q96MH6 324 aa12.09□□□□□ -0.47
CLDND1-211ENST00000506575 COMMD3Q9UBI1 195 aa12.09□□□□□ -0.47
CLDND1-211ENST00000506575 SMIM31A0A1B0GVY4 71 aa12.08□□□□□ -0.48
CLDND1-211ENST00000506575 SEC14L6B5MCN3 397 aa12.08□□□□□ -0.48
CLDND1-211ENST00000506575 H3BUA1 57 aa12.08□□□□□ -0.48
CLDND1-211ENST00000506575 ACTL6BO94805 426 aa12.08□□□□□ -0.48
CLDND1-211ENST00000506575 PPYP01298 95 aa12.08□□□□□ -0.48
CLDND1-211ENST00000506575 IGLV2-14P01704 120 aa12.08□□□□□ -0.48
CLDND1-211ENST00000506575 IGHV3-11P01762 117 aa12.08□□□□□ -0.48
CLDND1-211ENST00000506575 RPL30P62888 115 aaKnown RBP12.08□□□□□ -0.48
CLDND1-211ENST00000506575 PRSS8Q16651 343 aa12.08□□□□□ -0.48
CLDND1-211ENST00000506575 ZNF66Q6ZN08 573 aa12.08□□□□□ -0.48
CLDND1-211ENST00000506575 IDO2Q6ZQW0 420 aa12.08□□□□□ -0.48
CLDND1-211ENST00000506575 MFSD4AQ8N468 514 aa12.08□□□□□ -0.48
CLDND1-211ENST00000506575 OR5T1Q8NG75 326 aa12.08□□□□□ -0.48
CLDND1-211ENST00000506575 OR4S2Q8NH73 311 aa12.08□□□□□ -0.48
CLDND1-211ENST00000506575 SNAPC3Q92966 411 aa12.08□□□□□ -0.48
CLDND1-211ENST00000506575 ALX4Q9H161 411 aaPredicted RBP12.08□□□□□ -0.48
CLDND1-211ENST00000506575 TAS2R8Q9NYW2 309 aa12.08□□□□□ -0.48
CLDND1-211ENST00000506575 TNCP24821 2201 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 227.8 ms