RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 SLC23A1Q9UHI7 598 aa7.53□□□□□ -1.2
NEDD9-210ENST00000505589 FBXO7Q9Y3I1 522 aa7.53□□□□□ -1.2
NEDD9-210ENST00000505589 TRBV5-7A0A0A0MS05 114 aa7.52□□□□□ -1.21
NEDD9-210ENST00000505589 TRAV1-2A0A0B4J238 106 aa7.52□□□□□ -1.21
NEDD9-210ENST00000505589 UBE2QL1A1L167 161 aa7.52□□□□□ -1.21
NEDD9-210ENST00000505589 OR11H12B2RN74 326 aa7.52□□□□□ -1.21
NEDD9-210ENST00000505589 CA2P00918 260 aa7.52□□□□□ -1.21
NEDD9-210ENST00000505589 APOA2P02652 100 aa7.52□□□□□ -1.21
NEDD9-210ENST00000505589 ZBTB25P24278 435 aa7.52□□□□□ -1.21
NEDD9-210ENST00000505589 RPS19P39019 145 aaKnown RBP7.52□□□□□ -1.21
NEDD9-210ENST00000505589 OR3A3P47888 321 aa7.52□□□□□ -1.21
NEDD9-210ENST00000505589 MECP2P51608 486 aaKnown RBP7.52□□□□□ -1.21
NEDD9-210ENST00000505589 CBX3Q13185 183 aa7.52□□□□□ -1.21
NEDD9-210ENST00000505589 PSG5Q15238 335 aa7.52□□□□□ -1.21
NEDD9-210ENST00000505589 HSD17B12Q53GQ0 312 aa7.52□□□□□ -1.21
NEDD9-210ENST00000505589 AWAT2Q6E213 333 aa7.52□□□□□ -1.21
NEDD9-210ENST00000505589 FAM131AQ6UXB0 335 aa7.52□□□□□ -1.21
NEDD9-210ENST00000505589 IL34Q6ZMJ4 242 aa7.52□□□□□ -1.21
NEDD9-210ENST00000505589 TPRA1Q86W33 373 aa7.52□□□□□ -1.21
NEDD9-210ENST00000505589 PDPNQ86YL7 162 aa7.52□□□□□ -1.21
NEDD9-210ENST00000505589 JAGN1Q8N5M9 183 aa7.52□□□□□ -1.21
NEDD9-210ENST00000505589 TMEM217Q8N7C4 229 aa7.52□□□□□ -1.21
NEDD9-210ENST00000505589 IL1F10Q8WWZ1 152 aa7.52□□□□□ -1.21
NEDD9-210ENST00000505589 SLC25A46Q96AG3 418 aa7.52□□□□□ -1.21
NEDD9-210ENST00000505589 TINAGL1Q9GZM7 467 aaPredicted RBP7.52□□□□□ -1.21
NEDD9-210ENST00000505589 SLIRPQ9GZT3 109 aaKnown RBP7.52□□□□□ -1.21
NEDD9-210ENST00000505589 NXF2Q9GZY0 626 aaKnown RBP7.52□□□□□ -1.21
NEDD9-210ENST00000505589 CXorf65A6NEN9 183 aa7.51□□□□□ -1.21
NEDD9-210ENST00000505589 H0YJW9 148 aa7.51□□□□□ -1.21
NEDD9-210ENST00000505589 PDCD6O75340 191 aa7.51□□□□□ -1.21
NEDD9-210ENST00000505589 CRTAPO75718 401 aaPredicted RBP7.51□□□□□ -1.21
NEDD9-210ENST00000505589 CLEC2LP0C7M8 214 aa7.51□□□□□ -1.21
NEDD9-210ENST00000505589 MGMTP16455 207 aa7.51□□□□□ -1.21
NEDD9-210ENST00000505589 ATF4P18848 351 aaPredicted RBP7.51□□□□□ -1.21
NEDD9-210ENST00000505589 RORCP51449 518 aa7.51□□□□□ -1.21
NEDD9-210ENST00000505589 MXD1Q05195 221 aa7.51□□□□□ -1.21
NEDD9-210ENST00000505589 OR5T1Q8NG75 326 aa7.51□□□□□ -1.21
NEDD9-210ENST00000505589 MCFD2Q8NI22 146 aa7.51□□□□□ -1.21
NEDD9-210ENST00000505589 DYNLRB2Q8TF09 96 aa7.51□□□□□ -1.21
NEDD9-210ENST00000505589 FAM46BQ96A09 425 aa7.51□□□□□ -1.21
NEDD9-210ENST00000505589 UQCC2Q9BRT2 126 aa7.51□□□□□ -1.21
NEDD9-210ENST00000505589 SRD5A3Q9H8P0 318 aa7.51□□□□□ -1.21
NEDD9-210ENST00000505589 PLEKHA3Q9HB20 300 aa7.51□□□□□ -1.21
NEDD9-210ENST00000505589 ZNF581Q9P0T4 197 aa7.51□□□□□ -1.21
NEDD9-210ENST00000505589 ZNF221Q9UK13 617 aa7.51□□□□□ -1.21
NEDD9-210ENST00000505589 ALMS1Q8TCU4 4167 aa7.5□□□□□ -1.21
NEDD9-210ENST00000505589 A0A1W2PP11 408 aa7.5□□□□□ -1.21
NEDD9-210ENST00000505589 A0A1W2PPK0 400 aa7.5□□□□□ -1.21
NEDD9-210ENST00000505589 ST8SIA5O15466 376 aa7.5□□□□□ -1.21
NEDD9-210ENST00000505589 TUSC2O75896 110 aa7.5□□□□□ -1.21
NEDD9-210ENST00000505589 UBBP0CG47 229 aa7.5□□□□□ -1.21
NEDD9-210ENST00000505589 IGFBP3P17936 291 aaPredicted RBP7.5□□□□□ -1.21
NEDD9-210ENST00000505589 FSTP19883 344 aa7.5□□□□□ -1.21
NEDD9-210ENST00000505589 RANBP1P43487 201 aa7.5□□□□□ -1.21
NEDD9-210ENST00000505589 HMGN3Q15651 99 aa7.5□□□□□ -1.21
NEDD9-210ENST00000505589 LINC00299Q6ZSB3 139 aa7.5□□□□□ -1.21
NEDD9-210ENST00000505589 MOB1BQ7L9L4 216 aa7.5□□□□□ -1.21
NEDD9-210ENST00000505589 CROCCP3Q8IVE0 287 aa7.5□□□□□ -1.21
NEDD9-210ENST00000505589 NKAIN3Q8N8D7 197 aa7.5□□□□□ -1.21
NEDD9-210ENST00000505589 BVESQ8NE79 360 aa7.5□□□□□ -1.21
NEDD9-210ENST00000505589 GRPEL2Q8TAA5 225 aa7.5□□□□□ -1.21
NEDD9-210ENST00000505589 MRPL30Q8TCC3 161 aaKnown RBP7.5□□□□□ -1.21
NEDD9-210ENST00000505589 AP3S1Q92572 193 aa7.5□□□□□ -1.21
NEDD9-210ENST00000505589 Q96M66 194 aa7.5□□□□□ -1.21
NEDD9-210ENST00000505589 FAM110AQ9BQ89 295 aa7.5□□□□□ -1.21
NEDD9-210ENST00000505589 IFI27L2Q9H2X8 130 aa7.5□□□□□ -1.21
NEDD9-210ENST00000505589 A0A075B6Q4 140 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 TRAV8-7A0A075B6U6 113 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 LOC102724200A0A096LPH7 203 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-210ENST00000505589 SMIM30A4D0T7 59 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 FAM223BA6NKX1 122 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 PDCD5O14737 125 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 CREBL2O60519 120 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-210ENST00000505589 RRASP10301 218 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 SRMP19623 302 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 RAB3BP20337 219 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 BMI1P35226 326 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 CEACAM6P40199 344 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 KIR2DS2P43631 304 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 ATP5G2Q06055 141 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 GNMTQ14749 295 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 GUCA2BQ16661 112 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 CD300EQ496F6 205 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-210ENST00000505589 SFXN4Q6P4A7 337 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 CEMP1Q6PRD7 247 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-210ENST00000505589 LRRTM1Q86UE6 522 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 NR2C2APQ86WQ0 139 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 WFDC3Q8IUB2 231 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 FAM223AQ8IWN6 122 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 DEFB125Q8N687 156 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 PTX4Q96A99 478 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 PHB2Q99623 299 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 AGMATQ9BSE5 352 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 BANF2Q9H503 90 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 CHMP1AQ9HD42 196 aaPredicted RBP7.49□□□□□ -1.21
NEDD9-210ENST00000505589 RETNQ9HD89 108 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 COA4Q9NYJ1 87 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 GAB2Q9UQC2 676 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 TP53TG1Q9Y2A0 90 aa7.49□□□□□ -1.21
NEDD9-210ENST00000505589 FRAS1Q86XX4 4008 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms