RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 CD74P04233 296 aa13.3□□□□□ -0.28
SYNE4-207ENST00000505054 S100A5P33763 92 aa13.3□□□□□ -0.28
SYNE4-207ENST00000505054 TAGLNQ01995 201 aaKnown RBP13.3□□□□□ -0.28
SYNE4-207ENST00000505054 SSBP1Q04837 148 aaKnown RBP13.3□□□□□ -0.28
SYNE4-207ENST00000505054 ZNF818PQ6ZRF7 136 aa13.3□□□□□ -0.28
SYNE4-207ENST00000505054 KCTD9Q7L273 389 aa13.3□□□□□ -0.28
SYNE4-207ENST00000505054 TMEM229BQ8NBD8 167 aa13.3□□□□□ -0.28
SYNE4-207ENST00000505054 OR4D10Q8NGI6 311 aa13.3□□□□□ -0.28
SYNE4-207ENST00000505054 OR6Q1Q8NGQ2 317 aa13.3□□□□□ -0.28
SYNE4-207ENST00000505054 OR6F1Q8NGZ6 308 aa13.3□□□□□ -0.28
SYNE4-207ENST00000505054 FLYWCH2Q96CP2 140 aaKnown RBP13.3□□□□□ -0.28
SYNE4-207ENST00000505054 RNF5Q99942 180 aa13.3□□□□□ -0.28
SYNE4-207ENST00000505054 TAS2R8Q9NYW2 309 aa13.3□□□□□ -0.28
SYNE4-207ENST00000505054 ZNF107Q9UII5 783 aaPredicted RBP13.3□□□□□ -0.28
SYNE4-207ENST00000505054 RRHO14718 337 aa13.29□□□□□ -0.28
SYNE4-207ENST00000505054 TNFSF12O43508 249 aa13.29□□□□□ -0.28
SYNE4-207ENST00000505054 IGLV2-23P01705 113 aa13.29□□□□□ -0.28
SYNE4-207ENST00000505054 HLA-DRB1P01911 266 aa13.29□□□□□ -0.28
SYNE4-207ENST00000505054 TBPP20226 339 aa13.29□□□□□ -0.28
SYNE4-207ENST00000505054 GNRHRP30968 328 aa13.29□□□□□ -0.28
SYNE4-207ENST00000505054 RPS16P62249 146 aaKnown RBP13.29□□□□□ -0.28
SYNE4-207ENST00000505054 PSG5Q15238 335 aa13.29□□□□□ -0.28
SYNE4-207ENST00000505054 ZNF79Q15937 498 aa13.29□□□□□ -0.28
SYNE4-207ENST00000505054 RTL8BQ17RB0 113 aa13.29□□□□□ -0.28
SYNE4-207ENST00000505054 TMEM177Q53S58 311 aa13.29□□□□□ -0.28
SYNE4-207ENST00000505054 RNASE10Q5GAN6 216 aaKnown RBP13.29□□□□□ -0.28
SYNE4-207ENST00000505054 ZNF66Q6ZN08 573 aa13.29□□□□□ -0.28
SYNE4-207ENST00000505054 SLC35E3Q7Z769 313 aa13.29□□□□□ -0.28
SYNE4-207ENST00000505054 HSD17B10Q99714 261 aaKnown RBP13.29□□□□□ -0.28
SYNE4-207ENST00000505054 FBXL15Q9H469 300 aa13.29□□□□□ -0.28
SYNE4-207ENST00000505054 KIAA1456Q9P272 454 aa13.29□□□□□ -0.28
SYNE4-207ENST00000505054 SPDEFO95238 335 aa13.28□□□□□ -0.28
SYNE4-207ENST00000505054 CRYZL1O95825 349 aa13.28□□□□□ -0.28
SYNE4-207ENST00000505054 RRASP10301 218 aa13.28□□□□□ -0.28
SYNE4-207ENST00000505054 BRWD1-AS2P59051 145 aa13.28□□□□□ -0.28
SYNE4-207ENST00000505054 TAS2R19P59542 299 aa13.28□□□□□ -0.28
SYNE4-207ENST00000505054 TSPAN5P62079 268 aa13.28□□□□□ -0.28
SYNE4-207ENST00000505054 OR2B11Q5JQS5 317 aa13.28□□□□□ -0.28
SYNE4-207ENST00000505054 AADACL3Q5VUY0 350 aa13.28□□□□□ -0.28
SYNE4-207ENST00000505054 STEAP1BQ6NZ63 245 aa13.28□□□□□ -0.28
SYNE4-207ENST00000505054 MFSD4AQ8N468 514 aa13.28□□□□□ -0.28
SYNE4-207ENST00000505054 ZBTB34Q8NCN2 500 aa13.28□□□□□ -0.28
SYNE4-207ENST00000505054 TCTEX1D2Q8WW35 142 aa13.28□□□□□ -0.28
SYNE4-207ENST00000505054 HARBI1Q96MB7 349 aa13.28□□□□□ -0.28
SYNE4-207ENST00000505054 NOL4LQ96MY1 436 aaPredicted RBP13.28□□□□□ -0.28
SYNE4-207ENST00000505054 TSNAXQ99598 290 aaKnown RBP13.28□□□□□ -0.28
SYNE4-207ENST00000505054 TPSG1Q9NRR2 321 aa13.28□□□□□ -0.28
SYNE4-207ENST00000505054 SRRM4A7MD48 611 aaKnown RBP13.27□□□□□ -0.29
SYNE4-207ENST00000505054 FCGR3BO75015 233 aa13.27□□□□□ -0.29
SYNE4-207ENST00000505054 RAB3DO95716 219 aa13.27□□□□□ -0.29
SYNE4-207ENST00000505054 ETV6P41212 452 aa13.27□□□□□ -0.29
SYNE4-207ENST00000505054 CBX3Q13185 183 aa13.27□□□□□ -0.29
SYNE4-207ENST00000505054 FAAP20Q6NZ36 180 aa13.27□□□□□ -0.29
SYNE4-207ENST00000505054 C10orf99Q6UWK7 81 aa13.27□□□□□ -0.29
SYNE4-207ENST00000505054 LHFPL1Q86WI0 220 aa13.27□□□□□ -0.29
SYNE4-207ENST00000505054 ARRDC1Q8N5I2 433 aa13.27□□□□□ -0.29
SYNE4-207ENST00000505054 C11orf44Q8N8P7 122 aa13.27□□□□□ -0.29
SYNE4-207ENST00000505054 TRIM63Q969Q1 353 aa13.27□□□□□ -0.29
SYNE4-207ENST00000505054 METTL1Q9UBP6 276 aaKnown RBP13.27□□□□□ -0.29
SYNE4-207ENST00000505054 LINC00527Q9UJ94 153 aa13.27□□□□□ -0.29
SYNE4-207ENST00000505054 PRELID3BQ9Y3B1 194 aa13.27□□□□□ -0.29
SYNE4-207ENST00000505054 IGHV7-81A0A0B4J1V7 117 aa13.26□□□□□ -0.29
SYNE4-207ENST00000505054 FCN1O00602 326 aa13.26□□□□□ -0.29
SYNE4-207ENST00000505054 SLC25A17O43808 307 aa13.26□□□□□ -0.29
SYNE4-207ENST00000505054 IFNA6P05013 189 aa13.26□□□□□ -0.29
SYNE4-207ENST00000505054 CRYGBP07316 175 aa13.26□□□□□ -0.29
SYNE4-207ENST00000505054 ZNF735P0CB33 412 aa13.26□□□□□ -0.29
SYNE4-207ENST00000505054 LGALS7P47929 136 aa13.26□□□□□ -0.29
SYNE4-207ENST00000505054 NDPQ00604 133 aa13.26□□□□□ -0.29
SYNE4-207ENST00000505054 PYDC2Q56P42 97 aa13.26□□□□□ -0.29
SYNE4-207ENST00000505054 LIN54Q6MZP7 749 aa13.26□□□□□ -0.29
SYNE4-207ENST00000505054 ANKRD20A5PA0PJZ0 165 aa13.25□□□□□ -0.29
SYNE4-207ENST00000505054 AP4M1O00189 453 aa13.25□□□□□ -0.29
SYNE4-207ENST00000505054 SHOXO15266 292 aa13.25□□□□□ -0.29
SYNE4-207ENST00000505054 PRB2P02812 416 aaPredicted RBP13.25□□□□□ -0.29
SYNE4-207ENST00000505054 CD28P10747 220 aa13.25□□□□□ -0.29
SYNE4-207ENST00000505054 PTBP1P26599 531 aaKnown RBP eCLIP13.25□□□□□ -0.295e-8■■■■□ 19.5
SYNE4-207ENST00000505054 PLGLAQ15195 96 aa13.25□□□□□ -0.29
SYNE4-207ENST00000505054 SPANXN2Q5MJ10 180 aa13.25□□□□□ -0.29
SYNE4-207ENST00000505054 FOXRED2Q8IWF2 684 aa13.25□□□□□ -0.29
SYNE4-207ENST00000505054 STPG2Q8N412 459 aa13.25□□□□□ -0.29
SYNE4-207ENST00000505054 OR5AU1Q8NGC0 362 aa13.25□□□□□ -0.29
SYNE4-207ENST00000505054 OSR1Q8TAX0 266 aaPredicted RBP13.25□□□□□ -0.29
SYNE4-207ENST00000505054 BORCS5Q969J3 196 aa13.25□□□□□ -0.29
SYNE4-207ENST00000505054 THAP7Q9BT49 309 aaPredicted RBP13.25□□□□□ -0.29
SYNE4-207ENST00000505054 RSRP1Q9BUV0 290 aa13.25□□□□□ -0.29
SYNE4-207ENST00000505054 GPR31O00270 319 aa13.24□□□□□ -0.29
SYNE4-207ENST00000505054 RAMP3O60896 148 aa13.24□□□□□ -0.29
SYNE4-207ENST00000505054 FBXO24O75426 580 aa13.24□□□□□ -0.29
SYNE4-207ENST00000505054 PGLYRP1O75594 196 aaPredicted RBP13.24□□□□□ -0.29
SYNE4-207ENST00000505054 RLN1P04808 185 aa13.24□□□□□ -0.29
SYNE4-207ENST00000505054 IGF1P05019 195 aa13.24□□□□□ -0.29
SYNE4-207ENST00000505054 AKAIN1P0CW23 69 aa13.24□□□□□ -0.29
SYNE4-207ENST00000505054 UCP3P55916 312 aa13.24□□□□□ -0.29
SYNE4-207ENST00000505054 UBE2KP61086 200 aa13.24□□□□□ -0.29
SYNE4-207ENST00000505054 CX3CL1P78423 397 aa13.24□□□□□ -0.29
SYNE4-207ENST00000505054 MEF2DQ14814 521 aa13.24□□□□□ -0.29
SYNE4-207ENST00000505054 CNPY1Q3B7I2 92 aa13.24□□□□□ -0.29
SYNE4-207ENST00000505054 TCTEX1D4Q5JR98 221 aa13.24□□□□□ -0.29
SYNE4-207ENST00000505054 CENPVQ7Z7K6 275 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms