RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-220	ENST00000504687	CT45A6	P0DMU7	189 aa		10.85	□□□□□ -0.67
LMNA-220	ENST00000504687	CT45A5	P0DMU8	189 aa		10.85	□□□□□ -0.67
LMNA-220	ENST00000504687	CT45A7	P0DMV0	189 aa		10.85	□□□□□ -0.67
LMNA-220	ENST00000504687	IL3RA	P26951	378 aa		10.85	□□□□□ -0.67
LMNA-220	ENST00000504687	CDKN1A	P38936	164 aa		10.85	□□□□□ -0.67
LMNA-220	ENST00000504687	HTR2B	P41595	481 aa		10.85	□□□□□ -0.67
LMNA-220	ENST00000504687	ERVFRD-1	P60508	538 aa		10.85	□□□□□ -0.67
LMNA-220	ENST00000504687	GNB2	P62879	340 aa		10.85	□□□□□ -0.67
LMNA-220	ENST00000504687	ZNF816	Q0VGE8	651 aa	Predicted RBP	10.85	□□□□□ -0.67
LMNA-220	ENST00000504687	BAP18	Q8IXM2	172 aa		10.85	□□□□□ -0.67
LMNA-220	ENST00000504687	STPG2	Q8N412	459 aa		10.85	□□□□□ -0.67
LMNA-220	ENST00000504687	ZNF383	Q8NA42	475 aa		10.85	□□□□□ -0.67
LMNA-220	ENST00000504687	UBAC2	Q8NBM4	344 aa		10.85	□□□□□ -0.67
LMNA-220	ENST00000504687	LRRC20	Q8TCA0	184 aa		10.85	□□□□□ -0.67
LMNA-220	ENST00000504687	SSBP3	Q9BWW4	388 aa	Predicted RBP	10.85	□□□□□ -0.67
LMNA-220	ENST00000504687	ZNF471	Q9BX82	626 aa	Predicted RBP	10.85	□□□□□ -0.67
LMNA-220	ENST00000504687	SLC25A32	Q9H2D1	315 aa		10.85	□□□□□ -0.67
LMNA-220	ENST00000504687	UNKL	Q9H9P5	680 aa	Known RBP	10.85	□□□□□ -0.67
LMNA-220	ENST00000504687	MED9	Q9NWA0	146 aa		10.85	□□□□□ -0.67
LMNA-220	ENST00000504687	AUP1	Q9Y679	476 aa		10.85	□□□□□ -0.67
LMNA-220	ENST00000504687	FASN	P49327	2511 aa	Known RBP	10.85	□□□□□ -0.67
LMNA-220	ENST00000504687	NDUFS8	O00217	210 aa		10.84	□□□□□ -0.67
LMNA-220	ENST00000504687	WRB	O00258	174 aa		10.84	□□□□□ -0.67
LMNA-220	ENST00000504687	CHST1	O43916	411 aa		10.84	□□□□□ -0.67
LMNA-220	ENST00000504687	LY6H	O94772	140 aa		10.84	□□□□□ -0.67
LMNA-220	ENST00000504687	HRAS	P01112	189 aa		10.84	□□□□□ -0.67
LMNA-220	ENST00000504687	EPHA1	P21709	976 aa		10.84	□□□□□ -0.67
LMNA-220	ENST00000504687	G6PC	P35575	357 aa		10.84	□□□□□ -0.67
LMNA-220	ENST00000504687	GNG10	P50151	68 aa		10.84	□□□□□ -0.67
LMNA-220	ENST00000504687	PRRX1	P54821	245 aa		10.84	□□□□□ -0.67
LMNA-220	ENST00000504687	RAB14	P61106	215 aa		10.84	□□□□□ -0.67
LMNA-220	ENST00000504687	RPL23A	P62750	156 aa	Known RBP	10.84	□□□□□ -0.67
LMNA-220	ENST00000504687	VAMP2	P63027	116 aa		10.84	□□□□□ -0.67
LMNA-220	ENST00000504687	EWSR1	Q01844	656 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
LMNA-220	ENST00000504687	TNFRSF9	Q07011	255 aa		10.84	□□□□□ -0.67
LMNA-220	ENST00000504687	RTL8B	Q17RB0	113 aa		10.84	□□□□□ -0.67
LMNA-220	ENST00000504687	EIF5AL1	Q6IS14	154 aa	Known RBP	10.84	□□□□□ -0.67
LMNA-220	ENST00000504687	ZNF429	Q86V71	674 aa		10.84	□□□□□ -0.67
LMNA-220	ENST00000504687	ZNF295-AS1	Q8N0V1	137 aa		10.84	□□□□□ -0.67
LMNA-220	ENST00000504687	ABHD12	Q8N2K0	398 aa		10.84	□□□□□ -0.67
LMNA-220	ENST00000504687	TMEM252	Q8N6L7	170 aa		10.84	□□□□□ -0.67
LMNA-220	ENST00000504687	OSR1	Q8TAX0	266 aa	Predicted RBP	10.84	□□□□□ -0.67
LMNA-220	ENST00000504687	BARX1	Q9HBU1	254 aa	Predicted RBP	10.84	□□□□□ -0.67
LMNA-220	ENST00000504687	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	10.84	□□□□□ -0.67
LMNA-220	ENST00000504687		A0A1W2PPE3	182 aa		10.83	□□□□□ -0.68
LMNA-220	ENST00000504687	TXNL1	O43396	289 aa		10.83	□□□□□ -0.68
LMNA-220	ENST00000504687	KCNAB3	O43448	404 aa		10.83	□□□□□ -0.68
LMNA-220	ENST00000504687	SSSCA1	O60232	199 aa		10.83	□□□□□ -0.68
LMNA-220	ENST00000504687	ATP6V1G1	O75348	118 aa		10.83	□□□□□ -0.68
LMNA-220	ENST00000504687	SPDEF	O95238	335 aa		10.83	□□□□□ -0.68
LMNA-220	ENST00000504687	TMEM50A	O95807	157 aa		10.83	□□□□□ -0.68
LMNA-220	ENST00000504687	IGHV2-5	P01817	119 aa		10.83	□□□□□ -0.68
LMNA-220	ENST00000504687	MC5R	P33032	325 aa		10.83	□□□□□ -0.68
LMNA-220	ENST00000504687	ERVK-16	P61578	105 aa		10.83	□□□□□ -0.68
LMNA-220	ENST00000504687	TMEM177	Q53S58	311 aa		10.83	□□□□□ -0.68
LMNA-220	ENST00000504687	OR2B11	Q5JQS5	317 aa		10.83	□□□□□ -0.68
LMNA-220	ENST00000504687	OR8H3	Q8N146	312 aa		10.83	□□□□□ -0.68
LMNA-220	ENST00000504687	CIB3	Q96Q77	187 aa	Predicted RBP	10.83	□□□□□ -0.68
LMNA-220	ENST00000504687	CLEC7A	Q9BXN2	247 aa		10.83	□□□□□ -0.68
LMNA-220	ENST00000504687	FBXL17	Q9UF56	701 aa		10.83	□□□□□ -0.68
LMNA-220	ENST00000504687	HRNR	Q86YZ3	2850 aa	Predicted RBP	10.83	□□□□□ -0.68
LMNA-220	ENST00000504687	LOC105371242	A0A075B767	164 aa		10.82	□□□□□ -0.68
LMNA-220	ENST00000504687	IGHV2-26	A0A0B4J1V2	119 aa		10.82	□□□□□ -0.68
LMNA-220	ENST00000504687	C22orf46	C9J442	243 aa		10.82	□□□□□ -0.68
LMNA-220	ENST00000504687		H0YJW9	148 aa		10.82	□□□□□ -0.68
LMNA-220	ENST00000504687	IGHV3-7	P01780	117 aa		10.82	□□□□□ -0.68
LMNA-220	ENST00000504687	APOA2	P02652	100 aa		10.82	□□□□□ -0.68
LMNA-220	ENST00000504687	PDLIM4	P50479	330 aa		10.82	□□□□□ -0.68
LMNA-220	ENST00000504687	LINC00205	P59089	165 aa		10.82	□□□□□ -0.68
LMNA-220	ENST00000504687	UBE2K	P61086	200 aa		10.82	□□□□□ -0.68
LMNA-220	ENST00000504687	PAX2	Q02962	417 aa		10.82	□□□□□ -0.68
LMNA-220	ENST00000504687	HLA-DRB5	Q30154	266 aa		10.82	□□□□□ -0.68
LMNA-220	ENST00000504687	PDPN	Q86YL7	162 aa		10.82	□□□□□ -0.68
LMNA-220	ENST00000504687	PUSL1	Q8N0Z8	303 aa	Known RBP	10.82	□□□□□ -0.68
LMNA-220	ENST00000504687	OR11H6	Q8NGC7	330 aa		10.82	□□□□□ -0.68
LMNA-220	ENST00000504687	OR10X1	Q8NGY0	326 aa		10.82	□□□□□ -0.68
LMNA-220	ENST00000504687	CCL19	Q99731	98 aa		10.82	□□□□□ -0.68
LMNA-220	ENST00000504687	NABP2	Q9BQ15	211 aa		10.82	□□□□□ -0.68
LMNA-220	ENST00000504687	ZC4H2	Q9NQZ6	224 aa		10.82	□□□□□ -0.68
LMNA-220	ENST00000504687	SLC35D1	Q9NTN3	355 aa		10.82	□□□□□ -0.68
LMNA-220	ENST00000504687	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	10.82	□□□□□ -0.68
LMNA-220	ENST00000504687	KPTN	Q9Y664	436 aa		10.82	□□□□□ -0.68
LMNA-220	ENST00000504687	BORCS7-ASMT	A0A0B4J1R7	106 aa		10.81	□□□□□ -0.68
LMNA-220	ENST00000504687	IGSF23	A1L1A6	192 aa		10.81	□□□□□ -0.68
LMNA-220	ENST00000504687	ENSA	O43768	121 aa	Known RBP	10.81	□□□□□ -0.68
LMNA-220	ENST00000504687	NDUFS7	O75251	213 aa		10.81	□□□□□ -0.68
LMNA-220	ENST00000504687	IGHV4-39	P01824	125 aa		10.81	□□□□□ -0.68
LMNA-220	ENST00000504687	NMB	P08949	121 aa		10.81	□□□□□ -0.68
LMNA-220	ENST00000504687	PRTN3	P24158	256 aa		10.81	□□□□□ -0.68
LMNA-220	ENST00000504687	SULT1A1	P50225	295 aa		10.81	□□□□□ -0.68
LMNA-220	ENST00000504687	RAB13	P51153	203 aa		10.81	□□□□□ -0.68
LMNA-220	ENST00000504687	SPCS3	P61009	180 aa		10.81	□□□□□ -0.68
LMNA-220	ENST00000504687	RELB	Q01201	579 aa		10.81	□□□□□ -0.68
LMNA-220	ENST00000504687	ZNF266	Q14584	549 aa		10.81	□□□□□ -0.68
LMNA-220	ENST00000504687	IZUMO4	Q1ZYL8	232 aa		10.81	□□□□□ -0.68
LMNA-220	ENST00000504687	ALKAL2	Q6UX46	152 aa		10.81	□□□□□ -0.68
LMNA-220	ENST00000504687		Q8N7P7	452 aa		10.81	□□□□□ -0.68
LMNA-220	ENST00000504687	OR13D1	Q8NGV5	346 aa		10.81	□□□□□ -0.68
LMNA-220	ENST00000504687	RHOV	Q96L33	236 aa		10.81	□□□□□ -0.68
LMNA-220	ENST00000504687	GINS3	Q9BRX5	216 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms