RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 GPR146Q96CH1 333 aa8.41□□□□□ -1.06
TPM3-217ENST00000504663 NMES1Q9C002 83 aa8.41□□□□□ -1.06
TPM3-217ENST00000504663 LPAR2Q9HBW0 351 aa8.41□□□□□ -1.06
TPM3-217ENST00000504663 WNK2Q9Y3S1 2297 aa8.41□□□□□ -1.06
TPM3-217ENST00000504663 IL6RP08887 468 aaPredicted RBP8.4□□□□□ -1.06
TPM3-217ENST00000504663 LYL1P12980 280 aa8.4□□□□□ -1.06
TPM3-217ENST00000504663 REG1BP48304 166 aa8.4□□□□□ -1.06
TPM3-217ENST00000504663 ZNF816Q0VGE8 651 aaPredicted RBP8.4□□□□□ -1.06
TPM3-217ENST00000504663 POU2AF1Q16633 256 aa8.4□□□□□ -1.06
TPM3-217ENST00000504663 IZUMO4Q1ZYL8 232 aa8.4□□□□□ -1.06
TPM3-217ENST00000504663 LHFPL4Q7Z7J7 247 aa8.4□□□□□ -1.06
TPM3-217ENST00000504663 OR5AN1Q8NGI8 311 aa8.4□□□□□ -1.06
TPM3-217ENST00000504663 OR2T35Q8NGX2 323 aa8.4□□□□□ -1.06
TPM3-217ENST00000504663 C17orf50Q8WW18 174 aa8.4□□□□□ -1.06
TPM3-217ENST00000504663 LSM10Q969L4 123 aaKnown RBP8.4□□□□□ -1.06
TPM3-217ENST00000504663 TMEM186Q96B77 213 aa8.4□□□□□ -1.06
TPM3-217ENST00000504663 C2orf50Q96LR7 162 aa8.4□□□□□ -1.06
TPM3-217ENST00000504663 TMED3Q9Y3Q3 217 aa8.4□□□□□ -1.06
TPM3-217ENST00000504663 TET2Q6N021 2002 aaPredicted RBP8.4□□□□□ -1.06
TPM3-217ENST00000504663 CREBBPQ92793 2442 aa8.39□□□□□ -1.07
TPM3-217ENST00000504663 MAP1AP78559 2803 aaPredicted RBP8.39□□□□□ -1.07
TPM3-217ENST00000504663 TRAV20A0A0B4J274 112 aa8.39□□□□□ -1.07
TPM3-217ENST00000504663 FCGR3BO75015 233 aa8.39□□□□□ -1.07
TPM3-217ENST00000504663 IGKV1-16P04430 117 aa8.39□□□□□ -1.07
TPM3-217ENST00000504663 HNRNPCP07910 306 aaKnown RBP eCLIP8.39□□□□□ -1.07
TPM3-217ENST00000504663 MSMBP08118 114 aa8.39□□□□□ -1.07
TPM3-217ENST00000504663 IGHV4-31P0DP07 118 aa8.39□□□□□ -1.07
TPM3-217ENST00000504663 RPA2P15927 270 aa8.39□□□□□ -1.07
TPM3-217ENST00000504663 VDAC1P21796 283 aa8.39□□□□□ -1.07
TPM3-217ENST00000504663 HABP2Q14520 560 aaPredicted RBP8.39□□□□□ -1.07
TPM3-217ENST00000504663 AARDQ4LEZ3 155 aa8.39□□□□□ -1.07
TPM3-217ENST00000504663 TPTE2P1Q5T6R2 138 aa8.39□□□□□ -1.07
TPM3-217ENST00000504663 C11orf88Q6PI97 169 aa8.39□□□□□ -1.07
TPM3-217ENST00000504663 GSG1LQ6UXU4 331 aa8.39□□□□□ -1.07
TPM3-217ENST00000504663 NOXA1Q86UR1 476 aa8.39□□□□□ -1.07
TPM3-217ENST00000504663 C9orf62Q8N4C0 152 aa8.39□□□□□ -1.07
TPM3-217ENST00000504663 MAPK1IP1LQ8NDC0 245 aa8.39□□□□□ -1.07
TPM3-217ENST00000504663 WFDC11Q8NEX6 87 aa8.39□□□□□ -1.07
TPM3-217ENST00000504663 OR13D1Q8NGV5 346 aa8.39□□□□□ -1.07
TPM3-217ENST00000504663 PPP1R1CQ8WVI7 109 aa8.39□□□□□ -1.07
TPM3-217ENST00000504663 CFHR4Q92496 578 aa8.39□□□□□ -1.07
TPM3-217ENST00000504663 ADTRPQ96IZ2 230 aa8.39□□□□□ -1.07
TPM3-217ENST00000504663 Q96MF0 132 aa8.39□□□□□ -1.07
TPM3-217ENST00000504663 RNF126Q9BV68 326 aa8.39□□□□□ -1.07
TPM3-217ENST00000504663 PLEKHA2Q9HB19 425 aa8.39□□□□□ -1.07
TPM3-217ENST00000504663 PLA2G2EQ9NZK7 142 aa8.39□□□□□ -1.07
TPM3-217ENST00000504663 COMMD9Q9P000 198 aa8.39□□□□□ -1.07
TPM3-217ENST00000504663 IGHV1-3A0A0C4DH29 117 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 hCG_1809904A0A1W2PP81 198 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 A0A1W2PPE2 198 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 A0A1W2PR64 198 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 A0A1W2PRV1 198 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 SRRM4A7MD48 611 aaKnown RBP8.38□□□□□ -1.07
TPM3-217ENST00000504663 FAM25EA8MYX2 175 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 TOX4O94842 621 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 HPRT1P00492 218 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 AVPP01185 164 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 IGLV2-23P01705 113 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 SERPINE2P07093 398 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 OR9G9P0C7N8 305 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 SLC25A6P12236 298 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 S100GP29377 79 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 G6PCP35575 357 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 KIR2DS2P43631 304 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 RAB32Q13637 225 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 MRGPRG-AS1Q2M3A8 158 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 IAH1Q2TAA2 248 aaPredicted RBP8.38□□□□□ -1.07
TPM3-217ENST00000504663 TMEM95Q3KNT9 176 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 TMEM177Q53S58 311 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 C11orf87Q6NUJ2 197 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 ZNF695Q8IW36 515 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 OR10X1Q8NGY0 326 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 GRPEL2Q8TAA5 225 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 RITA1Q96K30 269 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 S1PR3Q99500 378 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 PCGF1Q9BSM1 259 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 REG4Q9BYZ8 158 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 RCL1Q9Y2P8 373 aaKnown RBP8.38□□□□□ -1.07
TPM3-217ENST00000504663 ZFHX3Q15911 3703 aa8.38□□□□□ -1.07
TPM3-217ENST00000504663 CENPVL3A0A0U1RRI6 287 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 C13orf42A0A1B0GVH6 325 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 RNF222A6NCQ9 220 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 C5orf51A6NDU8 294 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 K7EPK0 472 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 TOR1AO14656 332 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 MPC2O95563 127 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 CRYZL1O95825 349 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 FSHBP01225 129 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 MBPP02686 304 aaPredicted RBP8.37□□□□□ -1.07
TPM3-217ENST00000504663 ARG1P05089 322 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 SLC25A4P12235 298 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 PAX6P26367 422 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 IL3RAP26951 378 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 EIF2B2P49770 351 aaKnown RBP8.37□□□□□ -1.07
TPM3-217ENST00000504663 UBE2E1P51965 193 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 KRTAP1-1Q07627 177 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 ZFP69Q49AA0 526 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 KLF17Q5JT82 389 aaPredicted RBP8.37□□□□□ -1.07
TPM3-217ENST00000504663 TGIF2LXQ8IUE1 241 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 PDZD9Q8IXQ8 264 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms