RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 OR2W1Q9Y3N9 320 aa11.1□□□□□ -0.63
HOXC9-202ENST00000504557 ARPC1BO15143 372 aaKnown RBP11.09□□□□□ -0.63
HOXC9-202ENST00000504557 FCGR3BO75015 233 aa11.09□□□□□ -0.63
HOXC9-202ENST00000504557 SPDEFO95238 335 aa11.09□□□□□ -0.63
HOXC9-202ENST00000504557 IGLV1-40P01703 118 aa11.09□□□□□ -0.63
HOXC9-202ENST00000504557 IGLV2-23P01705 113 aa11.09□□□□□ -0.63
HOXC9-202ENST00000504557 DUTP33316 252 aaKnown RBP11.09□□□□□ -0.63
HOXC9-202ENST00000504557 SCAND1P57086 179 aa11.09□□□□□ -0.63
HOXC9-202ENST00000504557 TPPP2P59282 170 aa11.09□□□□□ -0.63
HOXC9-202ENST00000504557 DEFB121Q5J5C9 76 aa11.09□□□□□ -0.63
HOXC9-202ENST00000504557 ZNF562Q6V9R5 426 aa11.09□□□□□ -0.63
HOXC9-202ENST00000504557 KCTD9Q7L273 389 aa11.09□□□□□ -0.63
HOXC9-202ENST00000504557 MINDY2Q8NBR6 621 aa11.09□□□□□ -0.63
HOXC9-202ENST00000504557 OR5T1Q8NG75 326 aa11.09□□□□□ -0.63
HOXC9-202ENST00000504557 OR5M8Q8NGP6 311 aa11.09□□□□□ -0.63
HOXC9-202ENST00000504557 OR1N2Q8NGR9 330 aa11.09□□□□□ -0.63
HOXC9-202ENST00000504557 SECTM1Q8WVN6 248 aa11.09□□□□□ -0.63
HOXC9-202ENST00000504557 ADTRPQ96IZ2 230 aa11.09□□□□□ -0.63
HOXC9-202ENST00000504557 UBE2E2Q96LR5 201 aa11.09□□□□□ -0.63
HOXC9-202ENST00000504557 GPHA2Q96T91 129 aa11.09□□□□□ -0.63
HOXC9-202ENST00000504557 MCRIP2Q9BUT9 160 aaKnown RBP11.09□□□□□ -0.63
HOXC9-202ENST00000504557 AUNIPQ9H7T9 357 aa11.09□□□□□ -0.63
HOXC9-202ENST00000504557 IFT46Q9NQC8 304 aa11.09□□□□□ -0.63
HOXC9-202ENST00000504557 ZNF580Q9UK33 172 aa11.09□□□□□ -0.63
HOXC9-202ENST00000504557 NUBP2Q9Y5Y2 271 aa11.09□□□□□ -0.63
HOXC9-202ENST00000504557 SRRM4A7MD48 611 aaKnown RBP11.08□□□□□ -0.64
HOXC9-202ENST00000504557 TNFSF12O43508 249 aa11.08□□□□□ -0.64
HOXC9-202ENST00000504557 FCGR2CP31995 323 aa11.08□□□□□ -0.64
HOXC9-202ENST00000504557 FXYD4P59646 89 aa11.08□□□□□ -0.64
HOXC9-202ENST00000504557 DEFA5Q01523 94 aa11.08□□□□□ -0.64
HOXC9-202ENST00000504557 KIAA0141Q14154 515 aaPredicted RBP11.08□□□□□ -0.64
HOXC9-202ENST00000504557 TNXAQ16473 311 aa11.08□□□□□ -0.64
HOXC9-202ENST00000504557 UBE2NLQ5JXB2 153 aa11.08□□□□□ -0.64
HOXC9-202ENST00000504557 TMEM69Q5SWH9 247 aa11.08□□□□□ -0.64
HOXC9-202ENST00000504557 CROCCP3Q8IVE0 287 aa11.08□□□□□ -0.64
HOXC9-202ENST00000504557 TCTEX1D2Q8WW35 142 aa11.08□□□□□ -0.64
HOXC9-202ENST00000504557 ACOT12Q8WYK0 555 aa11.08□□□□□ -0.64
HOXC9-202ENST00000504557 S100A16Q96FQ6 103 aaKnown RBP11.08□□□□□ -0.64
HOXC9-202ENST00000504557 PHB2Q99623 299 aa11.08□□□□□ -0.64
HOXC9-202ENST00000504557 TAS2R8Q9NYW2 309 aa11.08□□□□□ -0.64
HOXC9-202ENST00000504557 COMMD3Q9UBI1 195 aa11.08□□□□□ -0.64
HOXC9-202ENST00000504557 RBMX2Q9Y388 322 aaKnown RBP11.08□□□□□ -0.64
HOXC9-202ENST00000504557 WI2-2373I1.2A0A1W2PRP0 233 aa11.07□□□□□ -0.64
HOXC9-202ENST00000504557 HLA-DQB1P01920 261 aa11.07□□□□□ -0.64
HOXC9-202ENST00000504557 TRGV3P03979 118 aa11.07□□□□□ -0.64
HOXC9-202ENST00000504557 RRASP10301 218 aa11.07□□□□□ -0.64
HOXC9-202ENST00000504557 AADACP22760 399 aa11.07□□□□□ -0.64
HOXC9-202ENST00000504557 CD40LGP29965 261 aa11.07□□□□□ -0.64
HOXC9-202ENST00000504557 LGALS7P47929 136 aa11.07□□□□□ -0.64
HOXC9-202ENST00000504557 RPL30P62888 115 aaKnown RBP11.07□□□□□ -0.64
HOXC9-202ENST00000504557 ZNF616Q08AN1 781 aa11.07□□□□□ -0.64
HOXC9-202ENST00000504557 VMA21Q3ZAQ7 101 aa11.07□□□□□ -0.64
HOXC9-202ENST00000504557 TMEM177Q53S58 311 aa11.07□□□□□ -0.64
HOXC9-202ENST00000504557 C19orf54Q5BKX5 351 aa11.07□□□□□ -0.64
HOXC9-202ENST00000504557 HOGA1Q86XE5 327 aa11.07□□□□□ -0.64
HOXC9-202ENST00000504557 MYOZ3Q8TDC0 251 aa11.07□□□□□ -0.64
HOXC9-202ENST00000504557 DDB2Q92466 427 aa11.07□□□□□ -0.64
HOXC9-202ENST00000504557 GPR61Q9BZJ8 451 aa11.07□□□□□ -0.64
HOXC9-202ENST00000504557 PRELID3BQ9Y3B1 194 aa11.07□□□□□ -0.64
HOXC9-202ENST00000504557 A0A0A6YYH2 397 aa11.06□□□□□ -0.64
HOXC9-202ENST00000504557 A6NJ64 397 aa11.06□□□□□ -0.64
HOXC9-202ENST00000504557 SEC14L6B5MCN3 397 aa11.06□□□□□ -0.64
HOXC9-202ENST00000504557 I3L521 148 aa11.06□□□□□ -0.64
HOXC9-202ENST00000504557 K7EIL1 84 aa11.06□□□□□ -0.64
HOXC9-202ENST00000504557 CRIP2P52943 208 aaPredicted RBP11.06□□□□□ -0.64
HOXC9-202ENST00000504557 SLURP1P55000 103 aa11.06□□□□□ -0.64
HOXC9-202ENST00000504557 TAS2R20P59543 309 aa11.06□□□□□ -0.64
HOXC9-202ENST00000504557 AKIRIN2Q53H80 203 aa11.06□□□□□ -0.64
HOXC9-202ENST00000504557 TMEM17Q86X19 198 aa11.06□□□□□ -0.64
HOXC9-202ENST00000504557 VKORC1L1Q8N0U8 176 aa11.06□□□□□ -0.64
HOXC9-202ENST00000504557 TCTEX1D1Q8N7M0 179 aa11.06□□□□□ -0.64
HOXC9-202ENST00000504557 OR13F1Q8NGS4 319 aa11.06□□□□□ -0.64
HOXC9-202ENST00000504557 NAA50Q9GZZ1 169 aaKnown RBP11.06□□□□□ -0.64
HOXC9-202ENST00000504557 CCL28Q9NRJ3 127 aa11.06□□□□□ -0.64
HOXC9-202ENST00000504557 MRPS7Q9Y2R9 242 aaKnown RBP11.06□□□□□ -0.64
HOXC9-202ENST00000504557 IGHV4OR15-8A0A075B7B6 117 aa11.05□□□□□ -0.64
HOXC9-202ENST00000504557 A0A087WW49 117 aa11.05□□□□□ -0.64
HOXC9-202ENST00000504557 MPPED1O15442 326 aa11.05□□□□□ -0.64
HOXC9-202ENST00000504557 XRCC3O43542 346 aa11.05□□□□□ -0.64
HOXC9-202ENST00000504557 EIF4EP06730 217 aaKnown RBP11.05□□□□□ -0.64
HOXC9-202ENST00000504557 CRYGBP07316 175 aa11.05□□□□□ -0.64
HOXC9-202ENST00000504557 OR8U8P0C7N1 319 aa11.05□□□□□ -0.64
HOXC9-202ENST00000504557 SAA1P0DJI8 122 aaPredicted RBP11.05□□□□□ -0.64
HOXC9-202ENST00000504557 SMIM18P0DKX4 95 aa11.05□□□□□ -0.64
HOXC9-202ENST00000504557 SSBP2P81877 361 aaPredicted RBP11.05□□□□□ -0.64
HOXC9-202ENST00000504557 ASPHD1Q5U4P2 390 aa11.05□□□□□ -0.64
HOXC9-202ENST00000504557 DCUN1D4Q92564 292 aa11.05□□□□□ -0.64
HOXC9-202ENST00000504557 SNAPC3Q92966 411 aa11.05□□□□□ -0.64
HOXC9-202ENST00000504557 SLC25A46Q96AG3 418 aa11.05□□□□□ -0.64
HOXC9-202ENST00000504557 SLC5A7Q9GZV3 580 aa11.05□□□□□ -0.64
HOXC9-202ENST00000504557 COA4Q9NYJ1 87 aa11.05□□□□□ -0.64
HOXC9-202ENST00000504557 EHFQ9NZC4 300 aa11.05□□□□□ -0.64
HOXC9-202ENST00000504557 ANKRD34BA5PLL1 514 aa11.04□□□□□ -0.64
HOXC9-202ENST00000504557 MSGN1A6NI15 193 aa11.04□□□□□ -0.64
HOXC9-202ENST00000504557 TRIM64CA6NLI5 447 aa11.04□□□□□ -0.64
HOXC9-202ENST00000504557 SLC22A5O76082 557 aa11.04□□□□□ -0.64
HOXC9-202ENST00000504557 PPYP01298 95 aa11.04□□□□□ -0.64
HOXC9-202ENST00000504557 IGLV2-14P01704 120 aa11.04□□□□□ -0.64
HOXC9-202ENST00000504557 PMP2P02689 132 aa11.04□□□□□ -0.64
HOXC9-202ENST00000504557 LGALS1P09382 135 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms