RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 C15orf62A8K5M9 175 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 IGHV3-13P01766 116 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 IGHV3-7P01780 117 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 GPR12P47775 334 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 RND2P52198 227 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 PMS2P11Q13670 270 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 FFAR4Q5NUL3 377 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 TRAT1Q6PIZ9 186 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 RPRMLQ8N4K4 120 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 OR10G9Q8NGN4 311 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 OR10G7Q8NGN6 311 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 MBD3L2Q8NHZ7 208 aaPredicted RBP8.19□□□□□ -1.1
CLIP1-204ENST00000501271 GATAD1Q8WUU5 269 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 CIB3Q96Q77 187 aaPredicted RBP8.19□□□□□ -1.1
CLIP1-204ENST00000501271 SPOCK3Q9BQ16 436 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 ZNF251Q9BRH9 671 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 TCEAL7Q9BRU2 100 aa8.19□□□□□ -1.1
CLIP1-204ENST00000501271 TANC2Q9HCD6 1990 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 HIST1H2BKO60814 126 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 FCGR3BO75015 233 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 TRGC2P03986 189 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 HIST1H2BJP06899 126 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 MDKP21741 143 aaPredicted RBP8.18□□□□□ -1.1
CLIP1-204ENST00000501271 HIST1H2BOP23527 126 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 HIST1H2BBP33778 126 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 HIST1H2BDP58876 126 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 HIST1H2BCP62807 126 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 HIST2H2BEQ16778 126 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 MORN2Q502X0 79 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.18□□□□□ -1.1
CLIP1-204ENST00000501271 UTF1Q5T230 341 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 FAM90A1Q86YD7 464 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 ZNRF1Q8ND25 227 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 EDARADDQ8WWZ3 215 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 HIST1H2BHQ93079 126 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 OR2V2Q96R30 315 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 HIST1H2BNQ99877 126 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 HIST1H2BMQ99879 126 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 FAM234AQ9H0X4 552 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 NIT2Q9NQR4 276 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 TMEM242Q9NWH2 141 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 DOK5Q9P104 306 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 GNG12Q9UBI6 72 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 WASF3Q9UPY6 502 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 RAI1Q7Z5J4 1906 aaPredicted RBP8.18□□□□□ -1.1
CLIP1-204ENST00000501271 SMG1Q96Q15 3661 aaKnown RBP8.18□□□□□ -1.1
CLIP1-204ENST00000501271 CLDN34H7C241 214 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 M0R1B8 84 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 CEACAM4O75871 244 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 HOXA5P20719 270 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 ZNF134P52741 427 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 NDUFA6P56556 154 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 B2MP61769 119 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 MZT1Q08AG7 82 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 RPL39P5Q59GN2 51 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 SSX9Q7RTT3 188 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 MOGAT3Q86VF5 341 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 C1orf87Q8N0U7 546 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 Q8N7P7 452 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 FAM169BQ8N8A8 192 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 S100PBPQ96BU1 408 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 SMIM7Q9BQ49 75 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 OR6C3Q9NZP0 311 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 JPT1Q9UK76 154 aa8.18□□□□□ -1.1
CLIP1-204ENST00000501271 ICE1Q9Y2F5 2266 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 ZNF318Q5VUA4 2279 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 M0R1X1 148 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 MGST3O14880 152 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 LOXL3P58215 753 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 GNB2P62879 340 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 ZNF474Q6S9Z5 364 aaPredicted RBP8.17□□□□□ -1.1
CLIP1-204ENST00000501271 SPNS3Q6ZMD2 512 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 C1orf174Q8IYL3 243 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 VKORC1L1Q8N0U8 176 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 RAB24Q969Q5 203 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 RPUSD4Q96CM3 377 aaKnown RBP8.17□□□□□ -1.1
CLIP1-204ENST00000501271 FAM210BQ96KR6 192 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 SNX22Q96L94 193 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 YPEL1O60688 119 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 KBTBD11O94819 623 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 MBP02144 154 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 SELLP14151 372 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 GZMHP20718 246 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 PSMB3P49720 205 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 EDDM3BP56851 147 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 ADIRFQ15847 76 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 CR1LQ2VPA4 569 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 AARDQ4LEZ3 155 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 VHLLQ6RSH7 139 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 C1orf229Q6ZS94 237 aaPredicted RBP8.17□□□□□ -1.1
CLIP1-204ENST00000501271 CYP2G1PQ6ZSU1 146 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 MEGF10Q96KG7 1140 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 YPEL2Q96QA6 119 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 ACTR3CQ9C0K3 210 aaPredicted RBP8.17□□□□□ -1.1
CLIP1-204ENST00000501271 IFI27L2Q9H2X8 130 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 GSN-AS1Q9NRJ2 163 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 NAT8Q9UHE5 227 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 FAM215AQ9Y5M1 114 aa8.17□□□□□ -1.1
CLIP1-204ENST00000501271 PLCE1Q9P212 2302 aa8.16□□□□□ -1.1
CLIP1-204ENST00000501271 BSNQ9UPA5 3926 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms