RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 UBE2CO00762 179 aa11.55□□□□□ -0.56
HDAC6-236ENST00000498808 DYNC1I1O14576 645 aa11.55□□□□□ -0.56
HDAC6-236ENST00000498808 SHOXO15266 292 aa11.55□□□□□ -0.56
HDAC6-236ENST00000498808 OR2J3O76001 311 aa11.55□□□□□ -0.56
HDAC6-236ENST00000498808 SCTP09683 121 aa11.55□□□□□ -0.56
HDAC6-236ENST00000498808 RPS27AP62979 156 aaKnown RBP11.55□□□□□ -0.56
HDAC6-236ENST00000498808 PRSS8Q16651 343 aa11.55□□□□□ -0.56
HDAC6-236ENST00000498808 BTNL8Q6UX41 500 aa11.55□□□□□ -0.56
HDAC6-236ENST00000498808 GPHB5Q86YW7 130 aa11.55□□□□□ -0.56
HDAC6-236ENST00000498808 ZFP41Q8N8Y5 198 aa11.55□□□□□ -0.56
HDAC6-236ENST00000498808 APH1BQ8WW43 257 aa11.55□□□□□ -0.56
HDAC6-236ENST00000498808 UQCC2Q9BRT2 126 aa11.55□□□□□ -0.56
HDAC6-236ENST00000498808 NICN1Q9BSH3 213 aa11.55□□□□□ -0.56
HDAC6-236ENST00000498808 GHRLQ9UBU3 117 aa11.55□□□□□ -0.56
HDAC6-236ENST00000498808 EXOSC1Q9Y3B2 195 aaKnown RBP11.55□□□□□ -0.56
HDAC6-236ENST00000498808 RPL36Q9Y3U8 105 aaKnown RBP11.55□□□□□ -0.56
HDAC6-236ENST00000498808 IGKV1-6A0A0C4DH72 117 aa11.54□□□□□ -0.56
HDAC6-236ENST00000498808 CTRB1P17538 263 aa11.54□□□□□ -0.56
HDAC6-236ENST00000498808 NANOS2P60321 138 aaKnown RBP11.54□□□□□ -0.56
HDAC6-236ENST00000498808 FAM209BQ5JX69 171 aa11.54□□□□□ -0.56
HDAC6-236ENST00000498808 CTRB2Q6GPI1 263 aa11.54□□□□□ -0.56
HDAC6-236ENST00000498808 TMPRSS11AQ6ZMR5 421 aa11.54□□□□□ -0.56
HDAC6-236ENST00000498808 IDO2Q6ZQW0 420 aa11.54□□□□□ -0.56
HDAC6-236ENST00000498808 LINC00336Q6ZUF6 198 aa11.54□□□□□ -0.56
HDAC6-236ENST00000498808 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-236ENST00000498808 OR1L6Q8NGR2 347 aa11.54□□□□□ -0.56
HDAC6-236ENST00000498808 FBLIM1Q8WUP2 373 aa11.54□□□□□ -0.56
HDAC6-236ENST00000498808 C5orf30Q96GV9 206 aa11.54□□□□□ -0.56
HDAC6-236ENST00000498808 CCDC140Q96MF4 163 aa11.54□□□□□ -0.56
HDAC6-236ENST00000498808 DERL3Q96Q80 235 aa11.54□□□□□ -0.56
HDAC6-236ENST00000498808 SLC29A1Q99808 456 aa11.54□□□□□ -0.56
HDAC6-236ENST00000498808 KIR2DL5BA0A0G2JN68 375 aa11.53□□□□□ -0.56
HDAC6-236ENST00000498808 KIR2DL5BA0A0G2JPC4 375 aa11.53□□□□□ -0.56
HDAC6-236ENST00000498808 IGHV3-23P01764 117 aa11.53□□□□□ -0.56
HDAC6-236ENST00000498808 C10orf55Q5SWW7 151 aa11.53□□□□□ -0.56
HDAC6-236ENST00000498808 C19orf35Q6ZS72 473 aa11.53□□□□□ -0.56
HDAC6-236ENST00000498808 KIR2DL5AQ8N109 375 aa11.53□□□□□ -0.56
HDAC6-236ENST00000498808 TTC9CQ8N5M4 171 aa11.53□□□□□ -0.56
HDAC6-236ENST00000498808 STPG3Q8N7X2 389 aa11.53□□□□□ -0.56
HDAC6-236ENST00000498808 NKAIN3Q8N8D7 197 aa11.53□□□□□ -0.56
HDAC6-236ENST00000498808 TEX45Q8NA69 505 aa11.53□□□□□ -0.56
HDAC6-236ENST00000498808 KIR2DL5BQ8NHK3 375 aa11.53□□□□□ -0.56
HDAC6-236ENST00000498808 ACOT12Q8WYK0 555 aa11.53□□□□□ -0.56
HDAC6-236ENST00000498808 TM2D1Q9BX74 207 aa11.53□□□□□ -0.56
HDAC6-236ENST00000498808 TMEM59Q9BXS4 323 aa11.53□□□□□ -0.56
HDAC6-236ENST00000498808 KCNK15Q9H427 330 aa11.53□□□□□ -0.56
HDAC6-236ENST00000498808 SDHAF2Q9NX18 166 aa11.53□□□□□ -0.56
HDAC6-236ENST00000498808 RDH8Q9NYR8 311 aa11.53□□□□□ -0.56
HDAC6-236ENST00000498808 UBQLN2Q9UHD9 624 aa11.53□□□□□ -0.56
HDAC6-236ENST00000498808 A0A0A6YYD4 124 aa11.52□□□□□ -0.57
HDAC6-236ENST00000498808 TRAV25A0A0B4J276 109 aa11.52□□□□□ -0.57
HDAC6-236ENST00000498808 ZNF320A2RRD8 509 aa11.52□□□□□ -0.57
HDAC6-236ENST00000498808 ATP8B1O43520 1251 aa11.52□□□□□ -0.57
HDAC6-236ENST00000498808 DCKP27707 260 aa11.52□□□□□ -0.57
HDAC6-236ENST00000498808 FCGR2BP31994 310 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-236ENST00000498808 ARL3P36405 182 aa11.52□□□□□ -0.57
HDAC6-236ENST00000498808 UBE2KP61086 200 aa11.52□□□□□ -0.57
HDAC6-236ENST00000498808 UNC119Q13432 240 aa11.52□□□□□ -0.57
HDAC6-236ENST00000498808 SMN1Q16637 294 aaKnown RBP11.52□□□□□ -0.57
HDAC6-236ENST00000498808 VMA21Q3ZAQ7 101 aa11.52□□□□□ -0.57
HDAC6-236ENST00000498808 CLEC19AQ6UXS0 136 aa11.52□□□□□ -0.57
HDAC6-236ENST00000498808 RIMS4Q9H426 269 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-236ENST00000498808 Q9N2K0 584 aa11.52□□□□□ -0.57
HDAC6-236ENST00000498808 FBXL17Q9UF56 701 aa11.52□□□□□ -0.57
HDAC6-236ENST00000498808 CLEC2DQ9UHP7 191 aa11.52□□□□□ -0.57
HDAC6-236ENST00000498808 AK3Q9UIJ7 227 aa11.52□□□□□ -0.57
HDAC6-236ENST00000498808 S4R3C0 116 aa11.52□□□□□ -0.57
HDAC6-236ENST00000498808 UBBP0CG47 229 aa11.51□□□□□ -0.57
HDAC6-236ENST00000498808 RBMS2Q15434 407 aaKnown RBP11.51□□□□□ -0.57
HDAC6-236ENST00000498808 C1orf146Q5VVC0 180 aa11.51□□□□□ -0.57
HDAC6-236ENST00000498808 OR2C3Q8N628 320 aa11.51□□□□□ -0.57
HDAC6-236ENST00000498808 SPIN2AQ99865 258 aa11.51□□□□□ -0.57
HDAC6-236ENST00000498808 SPIN2BQ9BPZ2 258 aa11.51□□□□□ -0.57
HDAC6-236ENST00000498808 OR2D2Q9H210 308 aa11.51□□□□□ -0.57
HDAC6-236ENST00000498808 ZNF430Q9H8G1 570 aaPredicted RBP11.51□□□□□ -0.57
HDAC6-236ENST00000498808 PLEKHJ1Q9NW61 149 aa11.51□□□□□ -0.57
HDAC6-236ENST00000498808 PNMA8CA0A1B0GUJ8 204 aa11.5□□□□□ -0.57
HDAC6-236ENST00000498808 WBP4O75554 376 aaKnown RBP11.5□□□□□ -0.57
HDAC6-236ENST00000498808 S1PR2O95136 353 aa11.5□□□□□ -0.57
HDAC6-236ENST00000498808 C8orf88P0DMB2 117 aa11.5□□□□□ -0.57
HDAC6-236ENST00000498808 RPL35AP18077 110 aaKnown RBP11.5□□□□□ -0.57
HDAC6-236ENST00000498808 MAP2K4P45985 399 aa11.5□□□□□ -0.57
HDAC6-236ENST00000498808 TCTAP57738 103 aa11.5□□□□□ -0.57
HDAC6-236ENST00000498808 CBX3Q13185 183 aa11.5□□□□□ -0.57
HDAC6-236ENST00000498808 RTL8BQ17RB0 113 aa11.5□□□□□ -0.57
HDAC6-236ENST00000498808 ODF3L2Q3SX64 289 aa11.5□□□□□ -0.57
HDAC6-236ENST00000498808 FAM106AQ4KMX7 169 aa11.5□□□□□ -0.57
HDAC6-236ENST00000498808 OR4A47Q6IF82 309 aa11.5□□□□□ -0.57
HDAC6-236ENST00000498808 UNQ9165/PRO28630Q6UXU0 137 aa11.5□□□□□ -0.57
HDAC6-236ENST00000498808 RBPMS2Q6ZRY4 209 aaKnown RBP11.5□□□□□ -0.57
HDAC6-236ENST00000498808 CEACAM19Q7Z692 300 aa11.5□□□□□ -0.57
HDAC6-236ENST00000498808 ZNF485Q8NCK3 441 aa11.5□□□□□ -0.57
HDAC6-236ENST00000498808 C11orf45Q8TAV5 145 aa11.5□□□□□ -0.57
HDAC6-236ENST00000498808 C2CD4CQ8TF44 421 aa11.5□□□□□ -0.57
HDAC6-236ENST00000498808 GGHQ92820 318 aa11.5□□□□□ -0.57
HDAC6-236ENST00000498808 FBXL7Q9UJT9 491 aa11.5□□□□□ -0.57
HDAC6-236ENST00000498808 APLNQ9ULZ1 77 aa11.5□□□□□ -0.57
HDAC6-236ENST00000498808 MGAT4AQ9UM21 535 aa11.5□□□□□ -0.57
HDAC6-236ENST00000498808 PKD1P98161 4303 aa11.49□□□□□ -0.57
HDAC6-236ENST00000498808 HMX3A6NHT5 357 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms