RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 HLA-DQB1P01920 261 aa14.3□□□□□ -0.12
HOXD11-202ENST00000498438 RRASP10301 218 aa14.3□□□□□ -0.12
HOXD11-202ENST00000498438 RPS19P39019 145 aaKnown RBP14.3□□□□□ -0.12
HOXD11-202ENST00000498438 FXYD3Q14802 87 aa14.3□□□□□ -0.12
HOXD11-202ENST00000498438 ACTBL2Q562R1 376 aa14.3□□□□□ -0.12
HOXD11-202ENST00000498438 GVQW1Q8N7I0 195 aa14.3□□□□□ -0.12
HOXD11-202ENST00000498438 LFNGQ8NES3 379 aa14.3□□□□□ -0.12
HOXD11-202ENST00000498438 OR5M8Q8NGP6 311 aa14.3□□□□□ -0.12
HOXD11-202ENST00000498438 GRPEL2Q8TAA5 225 aa14.3□□□□□ -0.12
HOXD11-202ENST00000498438 AUNIPQ9H7T9 357 aa14.3□□□□□ -0.12
HOXD11-202ENST00000498438 DIABLOQ9NR28 239 aa14.3□□□□□ -0.12
HOXD11-202ENST00000498438 IGKV1D-13A0A0B4J2D9 117 aa14.29□□□□□ -0.12
HOXD11-202ENST00000498438 SRRM4A7MD48 611 aaKnown RBP14.29□□□□□ -0.12
HOXD11-202ENST00000498438 CRYGBP07316 175 aa14.29□□□□□ -0.12
HOXD11-202ENST00000498438 IGKV1-13P0DP09 117 aa14.29□□□□□ -0.12
HOXD11-202ENST00000498438 PTHLHP12272 177 aa14.29□□□□□ -0.12
HOXD11-202ENST00000498438 ARPC4P59998 168 aa14.29□□□□□ -0.12
HOXD11-202ENST00000498438 GNB1P62873 340 aa14.29□□□□□ -0.12
HOXD11-202ENST00000498438 SSBP2P81877 361 aaPredicted RBP14.29□□□□□ -0.12
HOXD11-202ENST00000498438 RUNX1Q01196 453 aa14.29□□□□□ -0.12
HOXD11-202ENST00000498438 PJVKQ0ZLH3 352 aa14.29□□□□□ -0.12
HOXD11-202ENST00000498438 AKIRIN2Q53H80 203 aa14.29□□□□□ -0.12
HOXD11-202ENST00000498438 BEST4Q8NFU0 473 aa14.29□□□□□ -0.12
HOXD11-202ENST00000498438 TNCP24821 2201 aa14.29□□□□□ -0.12
HOXD11-202ENST00000498438 CNIH1O95406 144 aa14.28□□□□□ -0.12
HOXD11-202ENST00000498438 CRYZL1O95825 349 aa14.28□□□□□ -0.12
HOXD11-202ENST00000498438 UBE2NLQ5JXB2 153 aa14.28□□□□□ -0.12
HOXD11-202ENST00000498438 PYHIN1Q6K0P9 492 aa14.28□□□□□ -0.12
HOXD11-202ENST00000498438 RBMX2Q9Y388 322 aaKnown RBP14.28□□□□□ -0.12
HOXD11-202ENST00000498438 K7EIL1 84 aa14.27□□□□□ -0.13
HOXD11-202ENST00000498438 TUSC2O75896 110 aa14.27□□□□□ -0.13
HOXD11-202ENST00000498438 SLC22A5O76082 557 aa14.27□□□□□ -0.13
HOXD11-202ENST00000498438 IGLV2-14P01704 120 aa14.27□□□□□ -0.13
HOXD11-202ENST00000498438 FCER2P06734 321 aa14.27□□□□□ -0.13
HOXD11-202ENST00000498438 ZNF616Q08AN1 781 aa14.27□□□□□ -0.13
HOXD11-202ENST00000498438 ASPHD1Q5U4P2 390 aa14.27□□□□□ -0.13
HOXD11-202ENST00000498438 KCTD9Q7L273 389 aa14.27□□□□□ -0.13
HOXD11-202ENST00000498438 HOGA1Q86XE5 327 aa14.27□□□□□ -0.13
HOXD11-202ENST00000498438 SAMD12Q8N8I0 201 aa14.27□□□□□ -0.13
HOXD11-202ENST00000498438 OR1N2Q8NGR9 330 aa14.27□□□□□ -0.13
HOXD11-202ENST00000498438 MS4A10Q96PG2 267 aa14.27□□□□□ -0.13
HOXD11-202ENST00000498438 FUNDC2Q9BWH2 189 aa14.27□□□□□ -0.13
HOXD11-202ENST00000498438 ALX4Q9H161 411 aaPredicted RBP14.27□□□□□ -0.13
HOXD11-202ENST00000498438 WI2-2373I1.2A0A1W2PRP0 233 aa14.26□□□□□ -0.13
HOXD11-202ENST00000498438 XRCC3O43542 346 aa14.26□□□□□ -0.13
HOXD11-202ENST00000498438 OR8U8P0C7N1 319 aa14.26□□□□□ -0.13
HOXD11-202ENST00000498438 NCS1P62166 190 aa14.26□□□□□ -0.13
HOXD11-202ENST00000498438 VMA21Q3ZAQ7 101 aa14.26□□□□□ -0.13
HOXD11-202ENST00000498438 OR2B11Q5JQS5 317 aa14.26□□□□□ -0.13
HOXD11-202ENST00000498438 IDO2Q6ZQW0 420 aa14.26□□□□□ -0.13
HOXD11-202ENST00000498438 OSR1Q8TAX0 266 aaPredicted RBP14.26□□□□□ -0.13
HOXD11-202ENST00000498438 SNAPC3Q92966 411 aa14.26□□□□□ -0.13
HOXD11-202ENST00000498438 SLC25A46Q96AG3 418 aa14.26□□□□□ -0.13
HOXD11-202ENST00000498438 S100A16Q96FQ6 103 aaKnown RBP14.26□□□□□ -0.13
HOXD11-202ENST00000498438 MEIS3P1A6NDR6 274 aa14.25□□□□□ -0.13
HOXD11-202ENST00000498438 FCGR3BO75015 233 aa14.25□□□□□ -0.13
HOXD11-202ENST00000498438 LGALS1P09382 135 aaKnown RBP14.25□□□□□ -0.13
HOXD11-202ENST00000498438 CD40LGP29965 261 aa14.25□□□□□ -0.13
HOXD11-202ENST00000498438 CBX5P45973 191 aa14.25□□□□□ -0.13
HOXD11-202ENST00000498438 TPPP2P59282 170 aa14.25□□□□□ -0.13
HOXD11-202ENST00000498438 UBE2KP61086 200 aa14.25□□□□□ -0.13
HOXD11-202ENST00000498438 RPL30P62888 115 aaKnown RBP14.25□□□□□ -0.13
HOXD11-202ENST00000498438 MRGPRG-AS1Q2M3A8 158 aa14.25□□□□□ -0.13
HOXD11-202ENST00000498438 OVCH2Q7RTZ1 564 aa14.25□□□□□ -0.13
HOXD11-202ENST00000498438 TEX45Q8NA69 505 aa14.25□□□□□ -0.13
HOXD11-202ENST00000498438 OR13F1Q8NGS4 319 aa14.25□□□□□ -0.13
HOXD11-202ENST00000498438 PRELID3BQ9Y3B1 194 aa14.25□□□□□ -0.13
HOXD11-202ENST00000498438 SEC14L6B5MCN3 397 aa14.24□□□□□ -0.13
HOXD11-202ENST00000498438 IGHV3-11P01762 117 aa14.24□□□□□ -0.13
HOXD11-202ENST00000498438 SAA1P0DJI8 122 aaPredicted RBP14.24□□□□□ -0.13
HOXD11-202ENST00000498438 SMIM18P0DKX4 95 aa14.24□□□□□ -0.13
HOXD11-202ENST00000498438 AADACP22760 399 aa14.24□□□□□ -0.13
HOXD11-202ENST00000498438 FCGR2CP31995 323 aa14.24□□□□□ -0.13
HOXD11-202ENST00000498438 VBP1P61758 197 aa14.24□□□□□ -0.13
HOXD11-202ENST00000498438 EIF4EBP1Q13541 118 aaPredicted RBP14.24□□□□□ -0.13
HOXD11-202ENST00000498438 TMEM69Q5SWH9 247 aa14.24□□□□□ -0.13
HOXD11-202ENST00000498438 C9orf66Q5T8R8 295 aa14.24□□□□□ -0.13
HOXD11-202ENST00000498438 POC5Q8NA72 575 aa14.24□□□□□ -0.13
HOXD11-202ENST00000498438 TCTEX1D2Q8WW35 142 aa14.24□□□□□ -0.13
HOXD11-202ENST00000498438 DCUN1D5Q9BTE7 237 aa14.24□□□□□ -0.13
HOXD11-202ENST00000498438 SLA2Q9H6Q3 261 aa14.24□□□□□ -0.13
HOXD11-202ENST00000498438 MRPS7Q9Y2R9 242 aaKnown RBP14.24□□□□□ -0.13
HOXD11-202ENST00000498438 TRGV3P03979 118 aa14.23□□□□□ -0.13
HOXD11-202ENST00000498438 TAS2R20P59543 309 aa14.23□□□□□ -0.13
HOXD11-202ENST00000498438 TNXAQ16473 311 aa14.23□□□□□ -0.13
HOXD11-202ENST00000498438 PRSS8Q16651 343 aa14.23□□□□□ -0.13
HOXD11-202ENST00000498438 OR5T1Q8NG75 326 aa14.23□□□□□ -0.13
HOXD11-202ENST00000498438 SECTM1Q8WVN6 248 aa14.23□□□□□ -0.13
HOXD11-202ENST00000498438 KCTD12Q96CX2 325 aaKnown RBP14.23□□□□□ -0.13
HOXD11-202ENST00000498438 HSD17B10Q99714 261 aaKnown RBP14.23□□□□□ -0.13
HOXD11-202ENST00000498438 IFT46Q9NQC8 304 aa14.23□□□□□ -0.13
HOXD11-202ENST00000498438 ZNF355PQ9NSJ1 428 aa14.23□□□□□ -0.13
HOXD11-202ENST00000498438 TAS2R8Q9NYW2 309 aa14.23□□□□□ -0.13
HOXD11-202ENST00000498438 IGHV4OR15-8A0A075B7B6 117 aa14.22□□□□□ -0.13
HOXD11-202ENST00000498438 A0A087WW49 117 aa14.22□□□□□ -0.13
HOXD11-202ENST00000498438 LINC01619G3V211 115 aa14.22□□□□□ -0.13
HOXD11-202ENST00000498438 H3BUA1 57 aa14.22□□□□□ -0.13
HOXD11-202ENST00000498438 PPYP01298 95 aa14.22□□□□□ -0.13
HOXD11-202ENST00000498438 EIF4EP06730 217 aaKnown RBP14.22□□□□□ -0.13
HOXD11-202ENST00000498438 SLURP1P55000 103 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms