RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 PRR20EP86478 221 aa8.68□□□□□ -1.02
CDK9-205ENST00000498339 PRR20CP86479 221 aa8.68□□□□□ -1.02
CDK9-205ENST00000498339 PRR20DP86480 221 aa8.68□□□□□ -1.02
CDK9-205ENST00000498339 PRR20BP86481 221 aa8.68□□□□□ -1.02
CDK9-205ENST00000498339 PRR20AP86496 221 aa8.68□□□□□ -1.02
CDK9-205ENST00000498339 MED22Q15528 200 aa8.68□□□□□ -1.02
CDK9-205ENST00000498339 GLT8D1Q68CQ7 371 aa8.68□□□□□ -1.02
CDK9-205ENST00000498339 ZNF880Q6PDB4 577 aa8.68□□□□□ -1.02
CDK9-205ENST00000498339 CDH26Q8IXH8 852 aa8.68□□□□□ -1.02
CDK9-205ENST00000498339 STPG3Q8N7X2 389 aa8.68□□□□□ -1.02
CDK9-205ENST00000498339 UXS1Q8NBZ7 420 aa8.68□□□□□ -1.02
CDK9-205ENST00000498339 GGHQ92820 318 aa8.68□□□□□ -1.02
CDK9-205ENST00000498339 SLC29A1Q99808 456 aa8.68□□□□□ -1.02
CDK9-205ENST00000498339 NICN1Q9BSH3 213 aa8.68□□□□□ -1.02
CDK9-205ENST00000498339 OR2D2Q9H210 308 aa8.68□□□□□ -1.02
CDK9-205ENST00000498339 TRBV9A0A0B4J1U6 114 aa8.67□□□□□ -1.02
CDK9-205ENST00000498339 TMEM213A2RRL7 107 aa8.67□□□□□ -1.02
CDK9-205ENST00000498339 UBE2CO00762 179 aa8.67□□□□□ -1.02
CDK9-205ENST00000498339 XRCC3O43542 346 aa8.67□□□□□ -1.02
CDK9-205ENST00000498339 LALBAP00709 142 aa8.67□□□□□ -1.02
CDK9-205ENST00000498339 SCTP09683 121 aa8.67□□□□□ -1.02
CDK9-205ENST00000498339 UBBP0CG47 229 aa8.67□□□□□ -1.02
CDK9-205ENST00000498339 MED14OSP0DP75 135 aa8.67□□□□□ -1.02
CDK9-205ENST00000498339 RPL35AP18077 110 aaKnown RBP8.67□□□□□ -1.02
CDK9-205ENST00000498339 DCKP27707 260 aa8.67□□□□□ -1.02
CDK9-205ENST00000498339 HTR2CP28335 458 aa8.67□□□□□ -1.02
CDK9-205ENST00000498339 RPS11P62280 158 aaKnown RBP eCLIP8.67□□□□□ -1.02
CDK9-205ENST00000498339 RPS27AP62979 156 aaKnown RBP8.67□□□□□ -1.02
CDK9-205ENST00000498339 RBMS2Q15434 407 aaKnown RBP8.67□□□□□ -1.02
CDK9-205ENST00000498339 PRSS8Q16651 343 aa8.67□□□□□ -1.02
CDK9-205ENST00000498339 FAM106AQ4KMX7 169 aa8.67□□□□□ -1.02
CDK9-205ENST00000498339 OR4A47Q6IF82 309 aa8.67□□□□□ -1.02
CDK9-205ENST00000498339 CLEC19AQ6UXS0 136 aa8.67□□□□□ -1.02
CDK9-205ENST00000498339 SLC38A6Q8IZM9 456 aa8.67□□□□□ -1.02
CDK9-205ENST00000498339 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.67□□□□□ -1.02
CDK9-205ENST00000498339 RHOXF1Q8NHV9 184 aa8.67□□□□□ -1.02
CDK9-205ENST00000498339 PTX4Q96A99 478 aa8.67□□□□□ -1.02
CDK9-205ENST00000498339 DERL3Q96Q80 235 aa8.67□□□□□ -1.02
CDK9-205ENST00000498339 SPIN2AQ99865 258 aa8.67□□□□□ -1.02
CDK9-205ENST00000498339 SPIN2BQ9BPZ2 258 aa8.67□□□□□ -1.02
CDK9-205ENST00000498339 RIMS4Q9H426 269 aaPredicted RBP8.67□□□□□ -1.02
CDK9-205ENST00000498339 KCNK15Q9H427 330 aa8.67□□□□□ -1.02
CDK9-205ENST00000498339 FGF20Q9NP95 211 aaPredicted RBP8.67□□□□□ -1.02
CDK9-205ENST00000498339 MRPS18AQ9NVS2 196 aaKnown RBP8.67□□□□□ -1.02
CDK9-205ENST00000498339 RDH8Q9NYR8 311 aa8.67□□□□□ -1.02
CDK9-205ENST00000498339 AK3Q9UIJ7 227 aa8.67□□□□□ -1.02
CDK9-205ENST00000498339 MGAT4AQ9UM21 535 aa8.67□□□□□ -1.02
CDK9-205ENST00000498339 S4R3C0 116 aa8.67□□□□□ -1.02
CDK9-205ENST00000498339 DPPA5A6NC42 116 aa8.66□□□□□ -1.02
CDK9-205ENST00000498339 ATP8B1O43520 1251 aa8.66□□□□□ -1.02
CDK9-205ENST00000498339 CREBL2O60519 120 aaPredicted RBP8.66□□□□□ -1.02
CDK9-205ENST00000498339 CRYZL1O95825 349 aa8.66□□□□□ -1.02
CDK9-205ENST00000498339 CTRB1P17538 263 aa8.66□□□□□ -1.02
CDK9-205ENST00000498339 NANOS2P60321 138 aaKnown RBP8.66□□□□□ -1.02
CDK9-205ENST00000498339 TAGLNQ01995 201 aaKnown RBP8.66□□□□□ -1.02
CDK9-205ENST00000498339 MED21Q13503 144 aa8.66□□□□□ -1.02
CDK9-205ENST00000498339 SMN1Q16637 294 aaKnown RBP8.66□□□□□ -1.02
CDK9-205ENST00000498339 TMEM177Q53S58 311 aa8.66□□□□□ -1.02
CDK9-205ENST00000498339 C10orf55Q5SWW7 151 aa8.66□□□□□ -1.02
CDK9-205ENST00000498339 CTRB2Q6GPI1 263 aa8.66□□□□□ -1.02
CDK9-205ENST00000498339 SLC25A42Q86VD7 318 aa8.66□□□□□ -1.02
CDK9-205ENST00000498339 OR2C3Q8N628 320 aa8.66□□□□□ -1.02
CDK9-205ENST00000498339 TEX45Q8NA69 505 aa8.66□□□□□ -1.02
CDK9-205ENST00000498339 PYDC1Q8WXC3 89 aa8.66□□□□□ -1.02
CDK9-205ENST00000498339 RNF183Q96D59 192 aa8.66□□□□□ -1.02
CDK9-205ENST00000498339 PGLYRP3Q96LB9 341 aa8.66□□□□□ -1.02
CDK9-205ENST00000498339 MFFQ9GZY8 342 aa8.66□□□□□ -1.02
CDK9-205ENST00000498339 C12orf4Q9NQ89 552 aa8.66□□□□□ -1.02
CDK9-205ENST00000498339 FBXL7Q9UJT9 491 aa8.66□□□□□ -1.02
CDK9-205ENST00000498339 RBM7Q9Y580 266 aaKnown RBP8.66□□□□□ -1.02
CDK9-205ENST00000498339 IRGMA1A4Y4 181 aa8.65□□□□□ -1.02
CDK9-205ENST00000498339 SRRM4A7MD48 611 aaKnown RBP8.65□□□□□ -1.02
CDK9-205ENST00000498339 A8MWP6 167 aa8.65□□□□□ -1.02
CDK9-205ENST00000498339 BET1O15155 118 aa8.65□□□□□ -1.02
CDK9-205ENST00000498339 CIB2O75838 187 aa8.65□□□□□ -1.02
CDK9-205ENST00000498339 GSTT2P0CG29 244 aa8.65□□□□□ -1.02
CDK9-205ENST00000498339 GSTT2BP0CG30 244 aa8.65□□□□□ -1.02
CDK9-205ENST00000498339 RRASP10301 218 aa8.65□□□□□ -1.02
CDK9-205ENST00000498339 MAPK3P27361 379 aaPredicted RBP8.65□□□□□ -1.02
CDK9-205ENST00000498339 UBE2KP61086 200 aa8.65□□□□□ -1.02
CDK9-205ENST00000498339 LINC00336Q6ZUF6 198 aa8.65□□□□□ -1.02
CDK9-205ENST00000498339 GPHB5Q86YW7 130 aa8.65□□□□□ -1.02
CDK9-205ENST00000498339 CBR4Q8N4T8 237 aa8.65□□□□□ -1.02
CDK9-205ENST00000498339 C11orf45Q8TAV5 145 aa8.65□□□□□ -1.02
CDK9-205ENST00000498339 C2CD4CQ8TF44 421 aa8.65□□□□□ -1.02
CDK9-205ENST00000498339 APH1BQ8WW43 257 aa8.65□□□□□ -1.02
CDK9-205ENST00000498339 ZNF430Q9H8G1 570 aaPredicted RBP8.65□□□□□ -1.02
CDK9-205ENST00000498339 Q9N2K0 584 aa8.65□□□□□ -1.02
CDK9-205ENST00000498339 SDHAF2Q9NX18 166 aa8.65□□□□□ -1.02
CDK9-205ENST00000498339 CLEC2DQ9UHP7 191 aa8.65□□□□□ -1.02
CDK9-205ENST00000498339 DNAH2Q9P225 4427 aa8.64□□□□□ -1.03
CDK9-205ENST00000498339 FAT2Q9NYQ8 4349 aa8.64□□□□□ -1.03
CDK9-205ENST00000498339 TRBV6-6A0A0A6YYG2 114 aa8.64□□□□□ -1.03
CDK9-205ENST00000498339 TRAV25A0A0B4J276 109 aa8.64□□□□□ -1.03
CDK9-205ENST00000498339 KIR2DL5BA0A0G2JN68 375 aa8.64□□□□□ -1.03
CDK9-205ENST00000498339 KIR2DL5BA0A0G2JPC4 375 aa8.64□□□□□ -1.03
CDK9-205ENST00000498339 LOC100130705A0A1B0GUX0 176 aa8.64□□□□□ -1.03
CDK9-205ENST00000498339 HMX3A6NHT5 357 aa8.64□□□□□ -1.03
CDK9-205ENST00000498339 FCGR2BP31994 310 aaPredicted RBP8.64□□□□□ -1.03
CDK9-205ENST00000498339 TPBGQ13641 420 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms