RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 IGHV4OR15-8A0A075B7B6 117 aa9.84□□□□□ -0.83
PTPRF-214ENST00000496043 A0A087WW49 117 aa9.84□□□□□ -0.83
PTPRF-214ENST00000496043 A0A0G2JLM5 398 aa9.84□□□□□ -0.83
PTPRF-214ENST00000496043 C13orf42A0A1B0GVH6 325 aa9.84□□□□□ -0.83
PTPRF-214ENST00000496043 SMIM30A4D0T7 59 aa9.84□□□□□ -0.83
PTPRF-214ENST00000496043 SRRM4A7MD48 611 aaKnown RBP9.84□□□□□ -0.83
PTPRF-214ENST00000496043 H3BUA1 57 aa9.84□□□□□ -0.83
PTPRF-214ENST00000496043 SAP30O75446 220 aa9.84□□□□□ -0.83
PTPRF-214ENST00000496043 SCGNO76038 276 aa9.84□□□□□ -0.83
PTPRF-214ENST00000496043 PITPNAQ00169 270 aa9.84□□□□□ -0.83
PTPRF-214ENST00000496043 PJVKQ0ZLH3 352 aa9.84□□□□□ -0.83
PTPRF-214ENST00000496043 HACD4Q5VWC8 232 aa9.84□□□□□ -0.83
PTPRF-214ENST00000496043 TEX45Q8NA69 505 aa9.84□□□□□ -0.83
PTPRF-214ENST00000496043 POC5Q8NA72 575 aa9.84□□□□□ -0.83
PTPRF-214ENST00000496043 HARBI1Q96MB7 349 aa9.84□□□□□ -0.83
PTPRF-214ENST00000496043 DAPK2Q9UIK4 370 aa9.84□□□□□ -0.83
PTPRF-214ENST00000496043 ELF5Q9UKW6 265 aaPredicted RBP9.84□□□□□ -0.83
PTPRF-214ENST00000496043 IGKV1D-8A0A087WSZ0 117 aa9.83□□□□□ -0.84
PTPRF-214ENST00000496043 J3QRK9 145 aa9.83□□□□□ -0.84
PTPRF-214ENST00000496043 SLC22A5O76082 557 aa9.83□□□□□ -0.84
PTPRF-214ENST00000496043 DUTP33316 252 aaKnown RBP9.83□□□□□ -0.84
PTPRF-214ENST00000496043 VMA21Q3ZAQ7 101 aa9.83□□□□□ -0.84
PTPRF-214ENST00000496043 ACSM6Q6P461 480 aa9.83□□□□□ -0.84
PTPRF-214ENST00000496043 WWC2-AS2Q96NR7 200 aa9.83□□□□□ -0.84
PTPRF-214ENST00000496043 OR4C12Q96R67 309 aa9.83□□□□□ -0.84
PTPRF-214ENST00000496043 RANGRFQ9HD47 186 aaPredicted RBP9.83□□□□□ -0.84
PTPRF-214ENST00000496043 MSGN1A6NI15 193 aa9.82□□□□□ -0.84
PTPRF-214ENST00000496043 SDC2P34741 201 aa9.82□□□□□ -0.84
PTPRF-214ENST00000496043 UBE2KP61086 200 aa9.82□□□□□ -0.84
PTPRF-214ENST00000496043 CNIH2Q6PI25 160 aa9.82□□□□□ -0.84
PTPRF-214ENST00000496043 ZNF773Q6PK81 442 aa9.82□□□□□ -0.84
PTPRF-214ENST00000496043 OR6Q1Q8NGQ2 317 aa9.82□□□□□ -0.84
PTPRF-214ENST00000496043 OSR1Q8TAX0 266 aaPredicted RBP9.82□□□□□ -0.84
PTPRF-214ENST00000496043 DDB2Q92466 427 aa9.82□□□□□ -0.84
PTPRF-214ENST00000496043 C5orf30Q96GV9 206 aa9.82□□□□□ -0.84
PTPRF-214ENST00000496043 ELOVL1Q9BW60 279 aa9.82□□□□□ -0.84
PTPRF-214ENST00000496043 OR51E2Q9H255 320 aa9.82□□□□□ -0.84
PTPRF-214ENST00000496043 OR2W1Q9Y3N9 320 aa9.82□□□□□ -0.84
PTPRF-214ENST00000496043 SMAD5-AS1Q9Y6J3 95 aa9.82□□□□□ -0.84
PTPRF-214ENST00000496043 LINC00473A8K010 186 aa9.81□□□□□ -0.84
PTPRF-214ENST00000496043 BRI3O95415 125 aa9.81□□□□□ -0.84
PTPRF-214ENST00000496043 CRYZL1O95825 349 aa9.81□□□□□ -0.84
PTPRF-214ENST00000496043 HLA-DQB1P01920 261 aa9.81□□□□□ -0.84
PTPRF-214ENST00000496043 SPNP16150 400 aa9.81□□□□□ -0.84
PTPRF-214ENST00000496043 ZP3P21754 424 aa9.81□□□□□ -0.84
PTPRF-214ENST00000496043 GNG2P59768 71 aa9.81□□□□□ -0.84
PTPRF-214ENST00000496043 SSBP2P81877 361 aaPredicted RBP9.81□□□□□ -0.84
PTPRF-214ENST00000496043 SFXN4Q6P4A7 337 aa9.81□□□□□ -0.84
PTPRF-214ENST00000496043 ZNF645Q8N7E2 425 aa9.81□□□□□ -0.84
PTPRF-214ENST00000496043 PHB2Q99623 299 aa9.81□□□□□ -0.84
PTPRF-214ENST00000496043 ASCL2Q99929 193 aa9.81□□□□□ -0.84
PTPRF-214ENST00000496043 DCUN1D5Q9BTE7 237 aa9.81□□□□□ -0.84
PTPRF-214ENST00000496043 TINAGL1Q9GZM7 467 aaPredicted RBP9.81□□□□□ -0.84
PTPRF-214ENST00000496043 PRELID3BQ9Y3B1 194 aa9.81□□□□□ -0.84
PTPRF-214ENST00000496043 U3KQK5 164 aa9.81□□□□□ -0.84
PTPRF-214ENST00000496043 DNAH9Q9NYC9 4486 aa9.81□□□□□ -0.84
PTPRF-214ENST00000496043 ANKRD34BA5PLL1 514 aa9.8□□□□□ -0.84
PTPRF-214ENST00000496043 TMEM235A6NFC5 223 aa9.8□□□□□ -0.84
PTPRF-214ENST00000496043 TUSC2O75896 110 aa9.8□□□□□ -0.84
PTPRF-214ENST00000496043 CLEC2LP0C7M8 214 aa9.8□□□□□ -0.84
PTPRF-214ENST00000496043 AADACP22760 399 aa9.8□□□□□ -0.84
PTPRF-214ENST00000496043 NFYAP23511 347 aaPredicted RBP9.8□□□□□ -0.84
PTPRF-214ENST00000496043 SCAND1P57086 179 aa9.8□□□□□ -0.84
PTPRF-214ENST00000496043 MXD1Q05195 221 aa9.8□□□□□ -0.84
PTPRF-214ENST00000496043 TNXAQ16473 311 aa9.8□□□□□ -0.84
PTPRF-214ENST00000496043 PRSS8Q16651 343 aa9.8□□□□□ -0.84
PTPRF-214ENST00000496043 MRGPRG-AS1Q2M3A8 158 aa9.8□□□□□ -0.84
PTPRF-214ENST00000496043 NUDCD2Q8WVJ2 157 aa9.8□□□□□ -0.84
PTPRF-214ENST00000496043 USMG5Q96IX5 58 aa9.8□□□□□ -0.84
PTPRF-214ENST00000496043 RHBDL2Q9NX52 303 aa9.8□□□□□ -0.84
PTPRF-214ENST00000496043 COA4Q9NYJ1 87 aa9.8□□□□□ -0.84
PTPRF-214ENST00000496043 ANXA10Q9UJ72 324 aa9.8□□□□□ -0.84
PTPRF-214ENST00000496043 RBMX2Q9Y388 322 aaKnown RBP9.8□□□□□ -0.84
PTPRF-214ENST00000496043 TRAV18A0A075B6X5 111 aa9.79□□□□□ -0.84
PTPRF-214ENST00000496043 LOC100506127A0A0U1RQW1 187 aa9.79□□□□□ -0.84
PTPRF-214ENST00000496043 SSX5O60225 188 aa9.79□□□□□ -0.84
PTPRF-214ENST00000496043 CREBL2O60519 120 aaPredicted RBP9.79□□□□□ -0.84
PTPRF-214ENST00000496043 FCGR3BO75015 233 aa9.79□□□□□ -0.84
PTPRF-214ENST00000496043 ACTL6BO94805 426 aa9.79□□□□□ -0.84
PTPRF-214ENST00000496043 GP9P14770 177 aa9.79□□□□□ -0.84
PTPRF-214ENST00000496043 CD36P16671 472 aa9.79□□□□□ -0.84
PTPRF-214ENST00000496043 TATDN3Q17R31 274 aa9.79□□□□□ -0.84
PTPRF-214ENST00000496043 IDNKQ5T6J7 187 aa9.79□□□□□ -0.84
PTPRF-214ENST00000496043 LGALS14Q8TCE9 139 aa9.79□□□□□ -0.84
PTPRF-214ENST00000496043 RNF167Q9H6Y7 350 aa9.79□□□□□ -0.84
PTPRF-214ENST00000496043 PEF1Q9UBV8 284 aaKnown RBP9.79□□□□□ -0.84
PTPRF-214ENST00000496043 MRPS7Q9Y2R9 242 aaKnown RBP9.79□□□□□ -0.84
PTPRF-214ENST00000496043 ETV7Q9Y603 341 aa9.79□□□□□ -0.84
PTPRF-214ENST00000496043 SORL1Q92673 2214 aa9.78□□□□□ -0.84
PTPRF-214ENST00000496043 A0A0A6YYH2 397 aa9.78□□□□□ -0.84
PTPRF-214ENST00000496043 A6NJ64 397 aa9.78□□□□□ -0.84
PTPRF-214ENST00000496043 MPPED1O15442 326 aa9.78□□□□□ -0.84
PTPRF-214ENST00000496043 OR9G9P0C7N8 305 aa9.78□□□□□ -0.84
PTPRF-214ENST00000496043 KLF5Q13887 457 aaPredicted RBP9.78□□□□□ -0.84
PTPRF-214ENST00000496043 CDK10Q15131 360 aa9.78□□□□□ -0.84
PTPRF-214ENST00000496043 NEDD8Q15843 81 aa9.78□□□□□ -0.84
PTPRF-214ENST00000496043 ZNF343Q6P1L6 599 aa9.78□□□□□ -0.84
PTPRF-214ENST00000496043 IDO2Q6ZQW0 420 aa9.78□□□□□ -0.84
PTPRF-214ENST00000496043 KCTD9Q7L273 389 aa9.78□□□□□ -0.84
PTPRF-214ENST00000496043 ANKRD13BQ86YJ7 626 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms