RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, human

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-223	ENST00000496024	GIMAP1	Q8WWP7	306 aa		7.74	□□□□□ -1.17
CALD1-223	ENST00000496024	FCAMR	Q8WWV6	532 aa		7.74	□□□□□ -1.17
CALD1-223	ENST00000496024	DDB2	Q92466	427 aa		7.74	□□□□□ -1.17
CALD1-223	ENST00000496024	RNF5	Q99942	180 aa		7.74	□□□□□ -1.17
CALD1-223	ENST00000496024	TPSG1	Q9NRR2	321 aa		7.74	□□□□□ -1.17
CALD1-223	ENST00000496024	PRELID3B	Q9Y3B1	194 aa		7.74	□□□□□ -1.17
CALD1-223	ENST00000496024	NOTCH3	Q9UM47	2321 aa		7.74	□□□□□ -1.17
CALD1-223	ENST00000496024		G3V318	75 aa		7.73	□□□□□ -1.17
CALD1-223	ENST00000496024	ATP6V0E1	O15342	81 aa		7.73	□□□□□ -1.17
CALD1-223	ENST00000496024	HLA-DRB1	P01911	266 aa		7.73	□□□□□ -1.17
CALD1-223	ENST00000496024	RRAS	P10301	218 aa		7.73	□□□□□ -1.17
CALD1-223	ENST00000496024	VDAC1	P21796	283 aa		7.73	□□□□□ -1.17
CALD1-223	ENST00000496024	TNFSF8	P32971	234 aa		7.73	□□□□□ -1.17
CALD1-223	ENST00000496024	GNB1	P62873	340 aa		7.73	□□□□□ -1.17
CALD1-223	ENST00000496024	CX3CL1	P78423	397 aa		7.73	□□□□□ -1.17
CALD1-223	ENST00000496024	NDP	Q00604	133 aa		7.73	□□□□□ -1.17
CALD1-223	ENST00000496024	CD83	Q01151	205 aa		7.73	□□□□□ -1.17
CALD1-223	ENST00000496024	TAGLN	Q01995	201 aa	Known RBP	7.73	□□□□□ -1.17
CALD1-223	ENST00000496024	PJVK	Q0ZLH3	352 aa		7.73	□□□□□ -1.17
CALD1-223	ENST00000496024	ECSCR	Q19T08	205 aa		7.73	□□□□□ -1.17
CALD1-223	ENST00000496024	TMEM177	Q53S58	311 aa		7.73	□□□□□ -1.17
CALD1-223	ENST00000496024	PRR31	Q5SQ13	230 aa		7.73	□□□□□ -1.17
CALD1-223	ENST00000496024	ZNF660	Q6AZW8	331 aa	Predicted RBP	7.73	□□□□□ -1.17
CALD1-223	ENST00000496024	DHRS11	Q6UWP2	260 aa		7.73	□□□□□ -1.17
CALD1-223	ENST00000496024	TREML4	Q6UXN2	200 aa		7.73	□□□□□ -1.17
CALD1-223	ENST00000496024	LCNL1	Q6ZST4	164 aa		7.73	□□□□□ -1.17
CALD1-223	ENST00000496024	MFSD4A	Q8N468	514 aa		7.73	□□□□□ -1.17
CALD1-223	ENST00000496024	C15orf40	Q8WUR7	153 aa		7.73	□□□□□ -1.17
CALD1-223	ENST00000496024	R3HDM4	Q96D70	268 aa		7.73	□□□□□ -1.17
CALD1-223	ENST00000496024	HSD17B10	Q99714	261 aa	Known RBP	7.73	□□□□□ -1.17
CALD1-223	ENST00000496024	OR51J1	Q9H342	316 aa		7.73	□□□□□ -1.17
CALD1-223	ENST00000496024	MTFP1	Q9UDX5	166 aa		7.73	□□□□□ -1.17
CALD1-223	ENST00000496024	TRAV41	A0A0B4J266	112 aa		7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	SRRM4	A7MD48	611 aa	Known RBP	7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	ADARB2-AS1	A8MUL3	147 aa		7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	GABARAP	H6UMI1	98 aa		7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	SPDEF	O95238	335 aa		7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	CNIH1	O95406	144 aa		7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	CA2	P00918	260 aa		7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	IGLV2-23	P01705	113 aa		7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	OPN1MW	P04001	364 aa		7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	CD3D	P04234	171 aa		7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	IFNA6	P05013	189 aa		7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	OPN1MW2	P0DN77	364 aa		7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	OPN1MW3	P0DN78	364 aa		7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	GNRHR	P30968	328 aa		7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	LGALS7	P47929	136 aa		7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	EIF4EBP1	Q13541	118 aa	Predicted RBP	7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	PHLDA2	Q53GA4	152 aa		7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	RNASE10	Q5GAN6	216 aa	Known RBP	7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	PYHIN1	Q6K0P9	492 aa		7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	ZNF66	Q6ZN08	573 aa		7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	IDO2	Q6ZQW0	420 aa		7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	ZNF818P	Q6ZRF7	136 aa		7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	NDUFA11	Q86Y39	141 aa		7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	OR51H1	Q8NH63	302 aa		7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	GRPEL2	Q8TAA5	225 aa		7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	MOB3A	Q96BX8	217 aa		7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	FAM103A1	Q9BTL3	118 aa	Known RBP	7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	TINAGL1	Q9GZM7	467 aa	Predicted RBP	7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	NXF2	Q9GZY0	626 aa	Known RBP	7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	FXYD6	Q9H0Q3	95 aa		7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	FBXO7	Q9Y3I1	522 aa		7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	TSSC4	Q9Y5U2	329 aa	Predicted RBP	7.72	□□□□□ -1.17
CALD1-223	ENST00000496024	NOTCH1	P46531	2555 aa		7.71	□□□□□ -1.17
CALD1-223	ENST00000496024	DPPA5	A6NC42	116 aa		7.71	□□□□□ -1.18
CALD1-223	ENST00000496024	FABP12	A6NFH5	140 aa		7.71	□□□□□ -1.18
CALD1-223	ENST00000496024	NUDT19	A8MXV4	375 aa		7.71	□□□□□ -1.18
CALD1-223	ENST00000496024	ZNF701	M0R085	212 aa	Predicted RBP	7.71	□□□□□ -1.18
CALD1-223	ENST00000496024	TPPP	O94811	219 aa		7.71	□□□□□ -1.18
CALD1-223	ENST00000496024	IGF1	P05019	195 aa		7.71	□□□□□ -1.18
CALD1-223	ENST00000496024	RPLP1	P05386	114 aa	Known RBP	7.71	□□□□□ -1.18
CALD1-223	ENST00000496024	PF4V1	P10720	104 aa		7.71	□□□□□ -1.18
CALD1-223	ENST00000496024	PGAM2	P15259	253 aa		7.71	□□□□□ -1.18
CALD1-223	ENST00000496024	S100A5	P33763	92 aa		7.71	□□□□□ -1.18
CALD1-223	ENST00000496024	FXYD3	Q14802	87 aa		7.71	□□□□□ -1.18
CALD1-223	ENST00000496024	VMA21	Q3ZAQ7	101 aa		7.71	□□□□□ -1.18
CALD1-223	ENST00000496024	ACTBL2	Q562R1	376 aa		7.71	□□□□□ -1.18
CALD1-223	ENST00000496024	AADACL3	Q5VUY0	350 aa		7.71	□□□□□ -1.18
CALD1-223	ENST00000496024	TEX38	Q6PEX7	206 aa		7.71	□□□□□ -1.18
CALD1-223	ENST00000496024	C18orf65	Q6ZTR6	163 aa		7.71	□□□□□ -1.18
CALD1-223	ENST00000496024	SSX9	Q7RTT3	188 aa		7.71	□□□□□ -1.18
CALD1-223	ENST00000496024	PPP1R27	Q86WC6	154 aa		7.71	□□□□□ -1.18
CALD1-223	ENST00000496024	VKORC1L1	Q8N0U8	176 aa		7.71	□□□□□ -1.18
CALD1-223	ENST00000496024	SPAG16	Q8N0X2	631 aa		7.71	□□□□□ -1.18
CALD1-223	ENST00000496024	ZBTB34	Q8NCN2	500 aa		7.71	□□□□□ -1.18
CALD1-223	ENST00000496024	OR4S2	Q8NH73	311 aa		7.71	□□□□□ -1.18
CALD1-223	ENST00000496024	OSR1	Q8TAX0	266 aa	Predicted RBP	7.71	□□□□□ -1.18
CALD1-223	ENST00000496024	CASTOR1	Q8WTX7	329 aa		7.71	□□□□□ -1.18
CALD1-223	ENST00000496024	SMIM4	Q8WVI0	70 aa		7.71	□□□□□ -1.18
CALD1-223	ENST00000496024	GON7	Q9BXV9	100 aa		7.71	□□□□□ -1.18
CALD1-223	ENST00000496024	MMP27	Q9H306	513 aa		7.71	□□□□□ -1.18
CALD1-223	ENST00000496024		A0A1W2PN81	502 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	GPR31	O00270	319 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	ARPC1B	O15143	372 aa	Known RBP	7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	RAMP3	O60896	148 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	RAB3D	O95716	219 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	RLN1	P04808	185 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	CRYGB	P07316	175 aa		7.7	□□□□□ -1.18
CALD1-223	ENST00000496024	SAA1	P0DJI8	122 aa	Predicted RBP	7.7	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms