RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 IGKV1-16P04430 117 aa13.62□□□□□ -0.23
HDAC6-235ENST00000495515 ZNF735P0CB33 412 aa13.62□□□□□ -0.23
HDAC6-235ENST00000495515 BLCAPP62952 87 aa13.62□□□□□ -0.23
HDAC6-235ENST00000495515 EIF4EBP1Q13541 118 aaPredicted RBP13.62□□□□□ -0.23
HDAC6-235ENST00000495515 ABCA11PQ4W5N1 156 aa13.62□□□□□ -0.23
HDAC6-235ENST00000495515 FAAP20Q6NZ36 180 aa13.62□□□□□ -0.23
HDAC6-235ENST00000495515 NPBQ8NG41 125 aa13.62□□□□□ -0.23
HDAC6-235ENST00000495515 OR4S2Q8NH73 311 aa13.62□□□□□ -0.23
HDAC6-235ENST00000495515 CD300LFQ8TDQ1 290 aa13.62□□□□□ -0.23
HDAC6-235ENST00000495515 SCGB3A2Q96PL1 93 aa13.62□□□□□ -0.23
HDAC6-235ENST00000495515 RSRP1Q9BUV0 290 aa13.62□□□□□ -0.23
HDAC6-235ENST00000495515 PLSCR3Q9NRY6 295 aa13.62□□□□□ -0.23
HDAC6-235ENST00000495515 SLC2A8Q9NY64 477 aa13.62□□□□□ -0.23
HDAC6-235ENST00000495515 SHOXO15266 292 aa13.61□□□□□ -0.23
HDAC6-235ENST00000495515 CRYZL1O95825 349 aa13.61□□□□□ -0.23
HDAC6-235ENST00000495515 COMPP49747 757 aaPredicted RBP13.61□□□□□ -0.23
HDAC6-235ENST00000495515 PPP5CP53041 499 aa13.61□□□□□ -0.23
HDAC6-235ENST00000495515 F2RL1P55085 397 aa13.61□□□□□ -0.23
HDAC6-235ENST00000495515 RPL30P62888 115 aaKnown RBP13.61□□□□□ -0.23
HDAC6-235ENST00000495515 PLGLAQ15195 96 aa13.61□□□□□ -0.23
HDAC6-235ENST00000495515 SURF2Q15527 256 aaPredicted RBP13.61□□□□□ -0.23
HDAC6-235ENST00000495515 TMEM177Q53S58 311 aa13.61□□□□□ -0.23
HDAC6-235ENST00000495515 C9orf152Q5JTZ5 239 aa13.61□□□□□ -0.23
HDAC6-235ENST00000495515 Q8N2B8 174 aa13.61□□□□□ -0.23
HDAC6-235ENST00000495515 Q8N9W7 124 aa13.61□□□□□ -0.23
HDAC6-235ENST00000495515 OR51S1Q8NGJ8 323 aa13.61□□□□□ -0.23
HDAC6-235ENST00000495515 LINC01006Q8NI28 216 aa13.61□□□□□ -0.23
HDAC6-235ENST00000495515 OSR1Q8TAX0 266 aaPredicted RBP13.61□□□□□ -0.23
HDAC6-235ENST00000495515 HARBI1Q96MB7 349 aa13.61□□□□□ -0.23
HDAC6-235ENST00000495515 CCDC32Q9BV29 185 aa13.61□□□□□ -0.23
HDAC6-235ENST00000495515 WDR12Q9GZL7 423 aaKnown RBP13.61□□□□□ -0.23
HDAC6-235ENST00000495515 ZNF702PQ9H963 129 aa13.61□□□□□ -0.23
HDAC6-235ENST00000495515 HRASLSQ9HDD0 168 aa13.61□□□□□ -0.23
HDAC6-235ENST00000495515 COL6A5A8TX70 2615 aa13.6□□□□□ -0.23
HDAC6-235ENST00000495515 CENPXA8MT69 81 aa13.6□□□□□ -0.23
HDAC6-235ENST00000495515 RRHO14718 337 aa13.6□□□□□ -0.23
HDAC6-235ENST00000495515 RBFOX2O43251 390 aaKnown RBP eCLIP13.6□□□□□ -0.23
HDAC6-235ENST00000495515 PEX14O75381 377 aa13.6□□□□□ -0.23
HDAC6-235ENST00000495515 PGLYRP1O75594 196 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-235ENST00000495515 NDUFA3O95167 84 aa13.6□□□□□ -0.23
HDAC6-235ENST00000495515 AMY1AP04745 511 aa13.6□□□□□ -0.23
HDAC6-235ENST00000495515 ZNF846Q147U1 533 aa13.6□□□□□ -0.23
HDAC6-235ENST00000495515 BAK1Q16611 211 aa13.6□□□□□ -0.23
HDAC6-235ENST00000495515 PHLDA2Q53GA4 152 aa13.6□□□□□ -0.23
HDAC6-235ENST00000495515 AWAT1Q58HT5 328 aa13.6□□□□□ -0.23
HDAC6-235ENST00000495515 OR2B11Q5JQS5 317 aa13.6□□□□□ -0.23
HDAC6-235ENST00000495515 C12orf54Q6X4T0 127 aa13.6□□□□□ -0.23
HDAC6-235ENST00000495515 IDO2Q6ZQW0 420 aa13.6□□□□□ -0.23
HDAC6-235ENST00000495515 SPAG16Q8N0X2 631 aa13.6□□□□□ -0.23
HDAC6-235ENST00000495515 FAM71E2Q8N5Q1 922 aa13.6□□□□□ -0.23
HDAC6-235ENST00000495515 TCTEX1D1Q8N7M0 179 aa13.6□□□□□ -0.23
HDAC6-235ENST00000495515 OR51H1Q8NH63 302 aa13.6□□□□□ -0.23
HDAC6-235ENST00000495515 TAF15Q92804 592 aaKnown RBP eCLIP13.6□□□□□ -0.23
HDAC6-235ENST00000495515 RITA1Q96K30 269 aa13.6□□□□□ -0.23
HDAC6-235ENST00000495515 SDHCQ99643 169 aaPredicted RBP13.6□□□□□ -0.23
HDAC6-235ENST00000495515 AIFM2Q9BRQ8 373 aa13.6□□□□□ -0.23
HDAC6-235ENST00000495515 C14orf166Q9Y224 244 aaKnown RBP13.6□□□□□ -0.23
HDAC6-235ENST00000495515 RNF114Q9Y508 228 aa13.6□□□□□ -0.23
HDAC6-235ENST00000495515 NAP1L6A6NFF2 107 aa13.59□□□□□ -0.23
HDAC6-235ENST00000495515 KCNAB3O43448 404 aa13.59□□□□□ -0.23
HDAC6-235ENST00000495515 RLN1P04808 185 aa13.59□□□□□ -0.23
HDAC6-235ENST00000495515 IL7P13232 177 aa13.59□□□□□ -0.23
HDAC6-235ENST00000495515 MDKP21741 143 aaPredicted RBP13.59□□□□□ -0.23
HDAC6-235ENST00000495515 CD40LGP29965 261 aa13.59□□□□□ -0.23
HDAC6-235ENST00000495515 VDAC2P45880 294 aaPredicted RBP13.59□□□□□ -0.23
HDAC6-235ENST00000495515 C5orf64Q2M2E5 130 aa13.59□□□□□ -0.23
HDAC6-235ENST00000495515 VMA21Q3ZAQ7 101 aa13.59□□□□□ -0.23
HDAC6-235ENST00000495515 LIN54Q6MZP7 749 aa13.59□□□□□ -0.23
HDAC6-235ENST00000495515 CCDC71LQ8N9Z2 235 aa13.59□□□□□ -0.23
HDAC6-235ENST00000495515 GPHA2Q96T91 129 aa13.59□□□□□ -0.23
HDAC6-235ENST00000495515 SLC2A9Q9NRM0 540 aa13.59□□□□□ -0.23
HDAC6-235ENST00000495515 COPZ2Q9P299 210 aa13.59□□□□□ -0.23
HDAC6-235ENST00000495515 HRASP01112 189 aa13.58□□□□□ -0.24
HDAC6-235ENST00000495515 CTSDP07339 412 aaPredicted RBP13.58□□□□□ -0.24
HDAC6-235ENST00000495515 CNTFRP26992 372 aa13.58□□□□□ -0.24
HDAC6-235ENST00000495515 RND3P61587 244 aa13.58□□□□□ -0.24
HDAC6-235ENST00000495515 PSG5Q15238 335 aa13.58□□□□□ -0.24
HDAC6-235ENST00000495515 SLC35E3Q7Z769 313 aa13.58□□□□□ -0.24
HDAC6-235ENST00000495515 OR13C8Q8NGS7 320 aa13.58□□□□□ -0.24
HDAC6-235ENST00000495515 MARCH1Q8TCQ1 289 aa13.58□□□□□ -0.24
HDAC6-235ENST00000495515 RBMXL1Q96E39 390 aaKnown RBP13.58□□□□□ -0.24
HDAC6-235ENST00000495515 C7orf50Q9BRJ6 194 aaKnown RBP13.58□□□□□ -0.24
HDAC6-235ENST00000495515 METTL1Q9UBP6 276 aaKnown RBP13.58□□□□□ -0.24
HDAC6-235ENST00000495515 FBN1P35555 2871 aaKnown RBP13.57□□□□□ -0.24
HDAC6-235ENST00000495515 SH2D7A6NKC9 451 aaPredicted RBP13.57□□□□□ -0.24
HDAC6-235ENST00000495515 HPRT1P00492 218 aa13.57□□□□□ -0.24
HDAC6-235ENST00000495515 IGHG2P01859 326 aa13.57□□□□□ -0.24
HDAC6-235ENST00000495515 HLA-DRB1P01911 266 aa13.57□□□□□ -0.24
HDAC6-235ENST00000495515 F2RP25116 425 aa13.57□□□□□ -0.24
HDAC6-235ENST00000495515 PIGPP57054 158 aa13.57□□□□□ -0.24
HDAC6-235ENST00000495515 TBC1D26Q86UD7 250 aa13.57□□□□□ -0.24
HDAC6-235ENST00000495515 FOXRED2Q8IWF2 684 aa13.57□□□□□ -0.24
HDAC6-235ENST00000495515 SLC25A21Q9BQT8 299 aaPredicted RBP13.57□□□□□ -0.24
HDAC6-235ENST00000495515 FBXL15Q9H469 300 aa13.57□□□□□ -0.24
HDAC6-235ENST00000495515 FAM212BQ9NTI7 297 aaPredicted RBP13.57□□□□□ -0.24
HDAC6-235ENST00000495515 MPPED1O15442 326 aa13.56□□□□□ -0.24
HDAC6-235ENST00000495515 SLC25A17O43808 307 aa13.56□□□□□ -0.24
HDAC6-235ENST00000495515 CREBL2O60519 120 aaPredicted RBP13.56□□□□□ -0.24
HDAC6-235ENST00000495515 UBE2KP61086 200 aa13.56□□□□□ -0.24
HDAC6-235ENST00000495515 Q6ZS46 218 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms