RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 P04436 131 aa12.84□□□□□ -0.35
SDF4-207ENST00000494748 IL6RP08887 468 aaPredicted RBP12.84□□□□□ -0.35
SDF4-207ENST00000494748 ZNF705DP0CH99 300 aaPredicted RBP12.84□□□□□ -0.35
SDF4-207ENST00000494748 ZNF705BP0CI00 300 aaPredicted RBP12.84□□□□□ -0.35
SDF4-207ENST00000494748 TMPRSS7Q7RTY8 843 aa12.84□□□□□ -0.35
SDF4-207ENST00000494748 FSCN3Q9NQT6 498 aa12.84□□□□□ -0.35
SDF4-207ENST00000494748 J3QT63 122 aa12.84□□□□□ -0.35
SDF4-207ENST00000494748 TRAPPC6AO75865 159 aa12.84□□□□□ -0.35
SDF4-207ENST00000494748 CA6P23280 308 aa12.84□□□□□ -0.35
SDF4-207ENST00000494748 TIMP3P35625 211 aa12.84□□□□□ -0.35
SDF4-207ENST00000494748 IL11RAQ14626 422 aa12.84□□□□□ -0.35
SDF4-207ENST00000494748 SPINK9Q5DT21 86 aa12.84□□□□□ -0.35
SDF4-207ENST00000494748 OR51B6Q9H340 312 aa12.84□□□□□ -0.35
SDF4-207ENST00000494748 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.84□□□□□ -0.35
SDF4-207ENST00000494748 RBM7Q9Y580 266 aaKnown RBP12.84□□□□□ -0.35
SDF4-207ENST00000494748 R4GN57 208 aa12.84□□□□□ -0.35
SDF4-207ENST00000494748 FRMD6-AS1P0C7T7 363 aa12.84□□□□□ -0.35
SDF4-207ENST00000494748 PSG7Q13046 419 aa12.84□□□□□ -0.35
SDF4-207ENST00000494748 TOMM20LQ6UXN7 152 aa12.84□□□□□ -0.35
SDF4-207ENST00000494748 SAP25Q8TEE9 199 aa12.84□□□□□ -0.35
SDF4-207ENST00000494748 WDR83OSQ9Y284 106 aa12.84□□□□□ -0.35
SDF4-207ENST00000494748 RNF212BA8MTL3 300 aa12.83□□□□□ -0.36
SDF4-207ENST00000494748 SERF1AO75920 110 aa12.83□□□□□ -0.36
SDF4-207ENST00000494748 TUSC5Q8IXB3 177 aa12.83□□□□□ -0.36
SDF4-207ENST00000494748 BTF3L4Q96K17 158 aa12.83□□□□□ -0.36
SDF4-207ENST00000494748 K7EN84 100 aa12.83□□□□□ -0.36
SDF4-207ENST00000494748 RRHO14718 337 aa12.83□□□□□ -0.36
SDF4-207ENST00000494748 CBLN1P23435 193 aa12.83□□□□□ -0.36
SDF4-207ENST00000494748 OR2D2Q9H210 308 aa12.83□□□□□ -0.36
SDF4-207ENST00000494748 GP6Q9HCN6 339 aa12.83□□□□□ -0.36
SDF4-207ENST00000494748 PARD6AQ9NPB6 346 aa12.83□□□□□ -0.36
SDF4-207ENST00000494748 ANKRD30BLA7E2S9 258 aa12.83□□□□□ -0.36
SDF4-207ENST00000494748 CCL4P13236 92 aa12.83□□□□□ -0.36
SDF4-207ENST00000494748 COL8A2P25067 703 aa12.83□□□□□ -0.36
SDF4-207ENST00000494748 LINC00205P59089 165 aa12.83□□□□□ -0.36
SDF4-207ENST00000494748 COL27A1Q8IZC6 1860 aaPredicted RBP12.82□□□□□ -0.36
SDF4-207ENST00000494748 F6UZH7 168 aa12.82□□□□□ -0.36
SDF4-207ENST00000494748 LINC00614P0C842 121 aa12.82□□□□□ -0.36
SDF4-207ENST00000494748 TNFSF10P50591 281 aa12.82□□□□□ -0.36
SDF4-207ENST00000494748 MSMO1Q15800 293 aa12.82□□□□□ -0.36
SDF4-207ENST00000494748 HLA-DRB5Q30154 266 aa12.82□□□□□ -0.36
SDF4-207ENST00000494748 OCC1Q8TAD7 63 aa12.82□□□□□ -0.36
SDF4-207ENST00000494748 HLA-CQ95604 372 aa12.82□□□□□ -0.36
SDF4-207ENST00000494748 DUSP23Q9BVJ7 150 aa12.82□□□□□ -0.36
SDF4-207ENST00000494748 GVINP1Q7Z2Y8 2422 aa12.82□□□□□ -0.36
SDF4-207ENST00000494748 PAFAH1B2P68402 229 aa12.82□□□□□ -0.36
SDF4-207ENST00000494748 ARSJQ5FYB0 599 aaPredicted RBP12.82□□□□□ -0.36
SDF4-207ENST00000494748 OR2M7Q8NG81 312 aa12.82□□□□□ -0.36
SDF4-207ENST00000494748 SCO2A0A1W2PP80 73 aa12.82□□□□□ -0.36
SDF4-207ENST00000494748 RAB29O14966 203 aa12.82□□□□□ -0.36
SDF4-207ENST00000494748 CLDN14O95500 239 aa12.82□□□□□ -0.36
SDF4-207ENST00000494748 ZNF146Q15072 292 aa12.82□□□□□ -0.36
SDF4-207ENST00000494748 SCCPDHQ8NBX0 429 aa12.82□□□□□ -0.36
SDF4-207ENST00000494748 OR10G8Q8NGN5 311 aa12.82□□□□□ -0.36
SDF4-207ENST00000494748 CHODLQ9H9P2 273 aa12.82□□□□□ -0.36
SDF4-207ENST00000494748 GDF1P27539 372 aa12.81□□□□□ -0.36
SDF4-207ENST00000494748 ZNF718Q3SXZ3 478 aa12.81□□□□□ -0.36
SDF4-207ENST00000494748 ZBTB34Q8NCN2 500 aa12.81□□□□□ -0.36
SDF4-207ENST00000494748 C1orf159Q96HA4 380 aa12.81□□□□□ -0.36
SDF4-207ENST00000494748 HSPB9Q9BQS6 159 aa12.81□□□□□ -0.36
SDF4-207ENST00000494748 OR2J1Q9GZK6 312 aa12.81□□□□□ -0.36
SDF4-207ENST00000494748 ZDHHC11Q9H8X9 412 aa12.81□□□□□ -0.36
SDF4-207ENST00000494748 PRSS46E5RG02 174 aa12.81□□□□□ -0.36
SDF4-207ENST00000494748 C17orf112F2Z3M2 114 aa12.81□□□□□ -0.36
SDF4-207ENST00000494748 ZNF808Q8N4W9 903 aaPredicted RBP12.81□□□□□ -0.36
SDF4-207ENST00000494748 ZNF709Q8N972 641 aa12.81□□□□□ -0.36
SDF4-207ENST00000494748 TMEM204Q9BSN7 226 aa12.81□□□□□ -0.36
SDF4-207ENST00000494748 LINC00473A8K010 186 aa12.8□□□□□ -0.36
SDF4-207ENST00000494748 PSPNO60542 156 aa12.8□□□□□ -0.36
SDF4-207ENST00000494748 NEURL1O76050 574 aa12.8□□□□□ -0.36
SDF4-207ENST00000494748 MT-CO3P00414 261 aa12.8□□□□□ -0.36
SDF4-207ENST00000494748 CELA3AP09093 270 aa12.8□□□□□ -0.36
SDF4-207ENST00000494748 ARL14EPLP0DKL9 152 aa12.8□□□□□ -0.36
SDF4-207ENST00000494748 CLDN18P56856 261 aa12.8□□□□□ -0.36
SDF4-207ENST00000494748 TPPP2P59282 170 aa12.8□□□□□ -0.36
SDF4-207ENST00000494748 PPP1R32Q7Z5V6 425 aa12.8□□□□□ -0.36
SDF4-207ENST00000494748 OR52L2PQ8NGH6 319 aa12.8□□□□□ -0.36
SDF4-207ENST00000494748 PAM16Q9Y3D7 125 aa12.8□□□□□ -0.36
SDF4-207ENST00000494748 YTHDF2Q9Y5A9 579 aaKnown RBP12.8□□□□□ -0.36
SDF4-207ENST00000494748 C12orf77C9JDV5 145 aa12.8□□□□□ -0.36
SDF4-207ENST00000494748 CTRLP40313 264 aa12.8□□□□□ -0.36
SDF4-207ENST00000494748 CEBPDP49716 269 aaPredicted RBP12.8□□□□□ -0.36
SDF4-207ENST00000494748 THBS3P49746 956 aa12.8□□□□□ -0.36
SDF4-207ENST00000494748 MRPL18Q9H0U6 180 aaKnown RBP12.8□□□□□ -0.36
SDF4-207ENST00000494748 KRTCAP3Q53RY4 240 aa12.8□□□□□ -0.36
SDF4-207ENST00000494748 FBXL7Q9UJT9 491 aa12.8□□□□□ -0.36
SDF4-207ENST00000494748 MDFIC2A0A1B0GVS7 189 aa12.79□□□□□ -0.36
SDF4-207ENST00000494748 STAG3L2P0CL84 134 aa12.79□□□□□ -0.36
SDF4-207ENST00000494748 STAG3L3P0CL85 134 aa12.79□□□□□ -0.36
SDF4-207ENST00000494748 LGALS4P56470 323 aa12.79□□□□□ -0.36
SDF4-207ENST00000494748 AARDQ4LEZ3 155 aa12.79□□□□□ -0.36
SDF4-207ENST00000494748 SPATA46Q5T0L3 261 aa12.79□□□□□ -0.36
SDF4-207ENST00000494748 CIB3Q96Q77 187 aaPredicted RBP12.79□□□□□ -0.36
SDF4-207ENST00000494748 PATZ1Q9HBE1 687 aaKnown RBP12.79□□□□□ -0.36
SDF4-207ENST00000494748 CEP250Q9BV73 2442 aa12.79□□□□□ -0.36
SDF4-207ENST00000494748 K7ESF4 209 aa12.79□□□□□ -0.36
SDF4-207ENST00000494748 HNF1AP20823 631 aa12.79□□□□□ -0.36
SDF4-207ENST00000494748 CD1BP29016 333 aa12.79□□□□□ -0.36
SDF4-207ENST00000494748 ARR3P36575 388 aa12.79□□□□□ -0.36
SDF4-207ENST00000494748 EDDM3BP56851 147 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms