RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 CNIH1O95406 144 aa25.79■■□□□ 1.72
CBX4-203ENST00000494546 LSM3P62310 102 aaKnown RBP25.79■■□□□ 1.72
CBX4-203ENST00000494546 RUNX1Q01196 453 aa25.79■■□□□ 1.72
CBX4-203ENST00000494546 ZNF645Q8N7E2 425 aa25.79■■□□□ 1.72
CBX4-203ENST00000494546 DIABLOQ9NR28 239 aa25.79■■□□□ 1.72
CBX4-203ENST00000494546 DNAH3Q8TD57 4116 aa25.78■■□□□ 1.72
CBX4-203ENST00000494546 LINC00473A8K010 186 aa25.78■■□□□ 1.72
CBX4-203ENST00000494546 ZNF616Q08AN1 781 aa25.78■■□□□ 1.72
CBX4-203ENST00000494546 PJVKQ0ZLH3 352 aa25.78■■□□□ 1.72
CBX4-203ENST00000494546 PYHIN1Q6K0P9 492 aa25.78■■□□□ 1.72
CBX4-203ENST00000494546 DDB2Q92466 427 aa25.78■■□□□ 1.72
CBX4-203ENST00000494546 MS4A10Q96PG2 267 aa25.78■■□□□ 1.72
CBX4-203ENST00000494546 ALX4Q9H161 411 aaPredicted RBP25.78■■□□□ 1.72
CBX4-203ENST00000494546 SPATA2Q9UM82 520 aa25.78■■□□□ 1.72
CBX4-203ENST00000494546 A0A0A6YYH2 397 aa25.77■■□□□ 1.72
CBX4-203ENST00000494546 A6NJ64 397 aa25.77■■□□□ 1.72
CBX4-203ENST00000494546 SRRM4A7MD48 611 aaKnown RBP25.77■■□□□ 1.72
CBX4-203ENST00000494546 CRYZL1O95825 349 aa25.77■■□□□ 1.72
CBX4-203ENST00000494546 CRYGBP07316 175 aa25.77■■□□□ 1.72
CBX4-203ENST00000494546 OR8U8P0C7N1 319 aa25.77■■□□□ 1.72
CBX4-203ENST00000494546 CD40LGP29965 261 aa25.77■■□□□ 1.72
CBX4-203ENST00000494546 DEFB121Q5J5C9 76 aa25.77■■□□□ 1.72
CBX4-203ENST00000494546 SEC14L6B5MCN3 397 aa25.76■■□□□ 1.71
CBX4-203ENST00000494546 TMEM127O75204 238 aa25.76■■□□□ 1.71
CBX4-203ENST00000494546 HLA-DQB1P01920 261 aa25.76■■□□□ 1.71
CBX4-203ENST00000494546 C9orf66Q5T8R8 295 aa25.76■■□□□ 1.71
CBX4-203ENST00000494546 ASPHD1Q5U4P2 390 aa25.76■■□□□ 1.71
CBX4-203ENST00000494546 CROCCP3Q8IVE0 287 aa25.76■■□□□ 1.71
CBX4-203ENST00000494546 GVQW1Q8N7I0 195 aa25.76■■□□□ 1.71
CBX4-203ENST00000494546 IGKV1D-13A0A0B4J2D9 117 aa25.75■■□□□ 1.71
CBX4-203ENST00000494546 TUSC2O75896 110 aa25.75■■□□□ 1.71
CBX4-203ENST00000494546 IGKV1-13P0DP09 117 aa25.75■■□□□ 1.71
CBX4-203ENST00000494546 RPS19P39019 145 aaKnown RBP25.75■■□□□ 1.71
CBX4-203ENST00000494546 ARPC4P59998 168 aa25.75■■□□□ 1.71
CBX4-203ENST00000494546 SSBP2P81877 361 aaPredicted RBP25.75■■□□□ 1.71
CBX4-203ENST00000494546 BEST4Q8NFU0 473 aa25.75■■□□□ 1.71
CBX4-203ENST00000494546 TPPP2P59282 170 aa25.74■■□□□ 1.71
CBX4-203ENST00000494546 DGCR2P98153 550 aa25.74■■□□□ 1.71
CBX4-203ENST00000494546 VMA21Q3ZAQ7 101 aa25.74■■□□□ 1.71
CBX4-203ENST00000494546 AUNIPQ9H7T9 357 aa25.74■■□□□ 1.71
CBX4-203ENST00000494546 ZNF355PQ9NSJ1 428 aa25.74■■□□□ 1.71
CBX4-203ENST00000494546 ZMAT5Q9UDW3 170 aaKnown RBP25.74■■□□□ 1.71
CBX4-203ENST00000494546 RBMX2Q9Y388 322 aaKnown RBP25.74■■□□□ 1.71
CBX4-203ENST00000494546 SLC22A5O76082 557 aa25.73■■□□□ 1.71
CBX4-203ENST00000494546 FCER2P06734 321 aa25.73■■□□□ 1.71
CBX4-203ENST00000494546 PTHLHP12272 177 aa25.73■■□□□ 1.71
CBX4-203ENST00000494546 FCGR3BO75015 233 aa25.72■■□□□ 1.71
CBX4-203ENST00000494546 IGHV3-11P01762 117 aa25.72■■□□□ 1.71
CBX4-203ENST00000494546 LGALS1P09382 135 aaKnown RBP25.72■■□□□ 1.71
CBX4-203ENST00000494546 KCTD9Q7L273 389 aa25.72■■□□□ 1.71
CBX4-203ENST00000494546 OR5T1Q8NG75 326 aa25.72■■□□□ 1.71
CBX4-203ENST00000494546 DCUN1D5Q9BTE7 237 aa25.72■■□□□ 1.71
CBX4-203ENST00000494546 SLA2Q9H6Q3 261 aa25.72■■□□□ 1.71
CBX4-203ENST00000494546 TRGV3P03979 118 aa25.71■■□□□ 1.71
CBX4-203ENST00000494546 UBE2KP61086 200 aa25.71■■□□□ 1.71
CBX4-203ENST00000494546 OR2B11Q5JQS5 317 aa25.71■■□□□ 1.71
CBX4-203ENST00000494546 IDO2Q6ZQW0 420 aa25.71■■□□□ 1.71
CBX4-203ENST00000494546 HOGA1Q86XE5 327 aa25.71■■□□□ 1.71
CBX4-203ENST00000494546 TEX45Q8NA69 505 aa25.71■■□□□ 1.71
CBX4-203ENST00000494546 OSR1Q8TAX0 266 aaPredicted RBP25.71■■□□□ 1.71
CBX4-203ENST00000494546 PRELID3BQ9Y3B1 194 aa25.71■■□□□ 1.71
CBX4-203ENST00000494546 IGLV2-14P01704 120 aa25.7■■□□□ 1.7
CBX4-203ENST00000494546 RPL30P62888 115 aaKnown RBP25.7■■□□□ 1.7
CBX4-203ENST00000494546 S100A16Q96FQ6 103 aaKnown RBP25.7■■□□□ 1.7
CBX4-203ENST00000494546 LINC01619G3V211 115 aa25.69■■□□□ 1.7
CBX4-203ENST00000494546 UBE2NLQ5JXB2 153 aa25.69■■□□□ 1.7
CBX4-203ENST00000494546 POC5Q8NA72 575 aa25.69■■□□□ 1.7
CBX4-203ENST00000494546 DCUN1D4Q92564 292 aa25.69■■□□□ 1.7
CBX4-203ENST00000494546 SCOCQ9UIL1 159 aa25.69■■□□□ 1.7
CBX4-203ENST00000494546 MRPS7Q9Y2R9 242 aaKnown RBP25.69■■□□□ 1.7
CBX4-203ENST00000494546 IGHV4OR15-8A0A075B7B6 117 aa25.68■■□□□ 1.7
CBX4-203ENST00000494546 A0A087WW49 117 aa25.68■■□□□ 1.7
CBX4-203ENST00000494546 XRCC3O43542 346 aa25.68■■□□□ 1.7
CBX4-203ENST00000494546 RAMP3O60896 148 aa25.68■■□□□ 1.7
CBX4-203ENST00000494546 FCGR2CP31995 323 aa25.68■■□□□ 1.7
CBX4-203ENST00000494546 SLURP1P55000 103 aa25.68■■□□□ 1.7
CBX4-203ENST00000494546 MRGPRG-AS1Q2M3A8 158 aa25.68■■□□□ 1.7
CBX4-203ENST00000494546 SAMD12Q8N8I0 201 aa25.68■■□□□ 1.7
CBX4-203ENST00000494546 PHB2Q99623 299 aa25.68■■□□□ 1.7
CBX4-203ENST00000494546 MEIS3P1A6NDR6 274 aa25.67■■□□□ 1.7
CBX4-203ENST00000494546 TRIM64CA6NLI5 447 aa25.67■■□□□ 1.7
CBX4-203ENST00000494546 AADACP22760 399 aa25.67■■□□□ 1.7
CBX4-203ENST00000494546 TNXAQ16473 311 aa25.67■■□□□ 1.7
CBX4-203ENST00000494546 PRSS8Q16651 343 aa25.67■■□□□ 1.7
CBX4-203ENST00000494546 TCTEX1D2Q8WW35 142 aa25.67■■□□□ 1.7
CBX4-203ENST00000494546 RHOVQ96L33 236 aa25.67■■□□□ 1.7
CBX4-203ENST00000494546 TMEM68Q96MH6 324 aa25.67■■□□□ 1.7
CBX4-203ENST00000494546 HSD17B10Q99714 261 aaKnown RBP25.67■■□□□ 1.7
CBX4-203ENST00000494546 FUNDC2Q9BWH2 189 aa25.67■■□□□ 1.7
CBX4-203ENST00000494546 TAS2R8Q9NYW2 309 aa25.67■■□□□ 1.7
CBX4-203ENST00000494546 OVOL1O14753 267 aa25.66■■□□□ 1.7
CBX4-203ENST00000494546 SAA1P0DJI8 122 aaPredicted RBP25.66■■□□□ 1.7
CBX4-203ENST00000494546 APELAP0DMC3 54 aa25.66■■□□□ 1.7
CBX4-203ENST00000494546 ECI1P42126 302 aa25.66■■□□□ 1.7
CBX4-203ENST00000494546 CBX5P45973 191 aa25.66■■□□□ 1.7
CBX4-203ENST00000494546 OVCH2Q7RTZ1 564 aa25.66■■□□□ 1.7
CBX4-203ENST00000494546 SECTM1Q8WVN6 248 aa25.66■■□□□ 1.7
CBX4-203ENST00000494546 ACOT12Q8WYK0 555 aa25.66■■□□□ 1.7
CBX4-203ENST00000494546 DLX4Q92988 240 aaPredicted RBP25.66■■□□□ 1.7
CBX4-203ENST00000494546 MSGN1A6NI15 193 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms