RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 LINC00574Q9H8X3 128 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 ING4Q9UNL4 249 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 POMPQ9Y244 141 aa3.95□□□□□ -1.78
PTCD3-219ENST00000494323 EPPK1P58107 5090 aaKnown RBP3.94□□□□□ -1.78
PTCD3-219ENST00000494323 C13orf42A0A1B0GVH6 325 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 OR4C45A6NMZ5 311 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 C15orf65H3BRN8 121 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 OVOL1O14753 267 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 ATP6V0E1O15342 81 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 GYG2O15488 501 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 APOHP02749 345 aaPredicted RBP3.94□□□□□ -1.78
PTCD3-219ENST00000494323 MT-ND2P03891 347 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 IGF1P05019 195 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 OR8U8P0C7N1 319 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 DBTP11182 482 aaKnown RBP3.94□□□□□ -1.78
PTCD3-219ENST00000494323 GP9P14770 177 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 CNTFRP26992 372 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 VHLP40337 213 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 ZNF616Q08AN1 781 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 CT45A1Q5HYN5 189 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 ATAD3CQ5T2N8 411 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 ELP2Q6IA86 826 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 RAB12Q6IQ22 244 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 SMIM29Q86T20 159 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 FAM71E2Q8N5Q1 922 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 ZNF383Q8NA42 475 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 OR10A7Q8NGE5 316 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 OR10V1Q8NGI7 309 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 OR51A2Q8NGJ7 313 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 OR8J1Q8NGP2 316 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 CT45A3Q8NHU0 189 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 TNFAIP8L1Q8WVP5 186 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 PELI1Q96FA3 418 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 C5orf30Q96GV9 206 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 C4orf36Q96KX1 117 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 CIB1Q99828 191 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 PDCD1LG2Q9BQ51 273 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 URM1Q9BTM9 101 aaKnown RBP3.94□□□□□ -1.78
PTCD3-219ENST00000494323 FAM192AQ9GZU8 254 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 RIBC2Q9H4K1 309 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 NCOR1P1Q9H4R4 102 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 ISG20L2Q9H9L3 353 aaKnown RBP3.94□□□□□ -1.78
PTCD3-219ENST00000494323 RHOFQ9HBH0 211 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 ISYNA1Q9NPH2 558 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 ZNF107Q9UII5 783 aaPredicted RBP3.94□□□□□ -1.78
PTCD3-219ENST00000494323 ST3GAL6Q9Y274 331 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 VSIG4Q9Y279 399 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 HUWE1Q7Z6Z7 4374 aaKnown RBP3.94□□□□□ -1.78
PTCD3-219ENST00000494323 CSMD3Q7Z407 3707 aa3.94□□□□□ -1.78
PTCD3-219ENST00000494323 RYR2Q92736 4967 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 A0A087WW49 117 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 A0A087X0K7 114 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 IGLV9-49A0A0B4J1Y8 123 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 TMEM30CPA0ZSE6 113 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 J3QRE1 110 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 GABRPO00591 440 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 GEMIN2O14893 280 aaKnown RBP3.93□□□□□ -1.78
PTCD3-219ENST00000494323 MAGEB3O15480 346 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 SULT1B1O43704 296 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 OR7C1O76099 320 aaPredicted RBP3.93□□□□□ -1.78
PTCD3-219ENST00000494323 IGHV3-11P01762 117 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 MT-ND4P03905 459 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 RAB3AP20336 220 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 FASP25445 335 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 IL3RAP26951 378 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 GTF2A1P52655 376 aaPredicted RBP3.93□□□□□ -1.78
PTCD3-219ENST00000494323 ACTBP60709 375 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 CBX3Q13185 183 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 TMED1Q13445 227 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 MMDQ15546 238 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 ATP6AP1Q15904 470 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 SYT6Q5T7P8 510 aaPredicted RBP3.93□□□□□ -1.78
PTCD3-219ENST00000494323 ASCL4Q6XD76 172 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 SLC25A48Q6ZT89 311 aaKnown RBP3.93□□□□□ -1.78
PTCD3-219ENST00000494323 LINC00311Q8N616 119 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 LRTM2Q8N967 370 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 CCDC197Q8NCU1 140 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 PXT1Q8NFP0 134 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 OR52M1Q8NGK5 317 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 OR4K15Q8NH41 348 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 OR52N1Q8NH53 320 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 OR5AK2Q8NH90 309 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 OR1L1Q8NH94 360 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 MYOZ3Q8TDC0 251 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 NEK7Q8TDX7 302 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 TSEN15Q8WW01 171 aaKnown RBP3.93□□□□□ -1.78
PTCD3-219ENST00000494323 ARPC1AQ92747 370 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 CYYR1Q96J86 154 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 UHRF2Q96PU4 802 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 ANKRD60Q9BZ19 345 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 OR51J1Q9H342 316 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 EDA2RQ9HAV5 297 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 AMBNQ9NP70 447 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 PARP11Q9NR21 331 aa3.93□□□□□ -1.78
PTCD3-219ENST00000494323 DYNC2H1Q8NCM8 4307 aaKnown RBP3.93□□□□□ -1.78
PTCD3-219ENST00000494323 DNAH7Q8WXX0 4024 aa3.92□□□□□ -1.78
PTCD3-219ENST00000494323 IGHV7-81A0A0B4J1V7 117 aa3.92□□□□□ -1.78
PTCD3-219ENST00000494323 TRAV41A0A0B4J266 112 aa3.92□□□□□ -1.78
PTCD3-219ENST00000494323 TRBV5-5A0A0J9YX44 114 aa3.92□□□□□ -1.78
PTCD3-219ENST00000494323 C12orf77C9JDV5 145 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms