RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 SMCO3A2RU48 225 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 DEFB108AA8MXU0 73 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 MKRN2OSH3BPM6 223 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 CLDN34H7C241 214 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 M0R1X1 148 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 CYB5R3P00387 301 aaPredicted RBP8.01□□□□□ -1.13
NPHP3-209ENST00000493732 SMIM6P0DI80 62 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 IRF2P14316 349 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 THBS3P49746 956 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 MEOX2P50222 304 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 ELLP55199 621 aaPredicted RBP8.01□□□□□ -1.13
NPHP3-209ENST00000493732 EDDM3BP56851 147 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 LOXL3P58215 753 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 OR2B8PP59922 312 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 MEF2BQ02080 365 aaPredicted RBP8.01□□□□□ -1.13
NPHP3-209ENST00000493732 TMEM249Q2WGJ8 235 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 FAM90A2PQ658T7 463 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 NCR3LG1Q68D85 454 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 LRP11Q86VZ4 500 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 RPP25LQ8N5L8 163 aaKnown RBP8.01□□□□□ -1.13
NPHP3-209ENST00000493732 NUP37Q8NFH4 326 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 Q8TCH9 128 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 C12orf57Q99622 126 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 NPCDR1Q9BY65 106 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 ESRP2Q9H6T0 727 aaKnown RBP8.01□□□□□ -1.13
NPHP3-209ENST00000493732 VSIRQ9H7M9 311 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 NAT8Q9UHE5 227 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 PTPRBP23467 1997 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 KBTBD11-OT1A0A1B0GTJ5 212 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 hCG_1809904A0A1W2PP81 198 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 A0A1W2PR64 198 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 A0A1W2PRV1 198 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 A8MXE2 369 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 VSTM5A8MXK1 200 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 AP4M1O00189 453 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 SPRY3O43610 288 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 CGB3P0DN86 165 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 CGB7P0DN87 165 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 MDKP21741 143 aaPredicted RBP8.01□□□□□ -1.13
NPHP3-209ENST00000493732 CD1BP29016 333 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 TMPRSS3P57727 454 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 TNFAIP6P98066 277 aaPredicted RBP8.01□□□□□ -1.13
NPHP3-209ENST00000493732 FFAR4Q5NUL3 377 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 TMEM108Q6UXF1 575 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 ITLN1Q8WWA0 313 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 RAB1CQ92928 201 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 TXNDC17Q9BRA2 123 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 SDF2L1Q9HCN8 221 aa8.01□□□□□ -1.13
NPHP3-209ENST00000493732 INTS1Q8N201 2190 aaKnown RBP8□□□□□ -1.13
NPHP3-209ENST00000493732 TRGV8A0A0C4DH27 118 aa8□□□□□ -1.13
NPHP3-209ENST00000493732 ZNF729A6NN14 1252 aaPredicted RBP8□□□□□ -1.13
NPHP3-209ENST00000493732 ZNF727A8MUV8 499 aa8□□□□□ -1.13
NPHP3-209ENST00000493732 PRRG2O14669 202 aa8□□□□□ -1.13
NPHP3-209ENST00000493732 IGHV2-5P01817 119 aa8□□□□□ -1.13
NPHP3-209ENST00000493732 OPN1MWP04001 364 aa8□□□□□ -1.13
NPHP3-209ENST00000493732 FBP1P09467 338 aa8□□□□□ -1.13
NPHP3-209ENST00000493732 OPN1MW2P0DN77 364 aa8□□□□□ -1.13
NPHP3-209ENST00000493732 OPN1MW3P0DN78 364 aa8□□□□□ -1.13
NPHP3-209ENST00000493732 TNFRSF1AP19438 455 aa8□□□□□ -1.13
NPHP3-209ENST00000493732 RPS10P46783 165 aaKnown RBP8□□□□□ -1.13
NPHP3-209ENST00000493732 RND2P52198 227 aa8□□□□□ -1.13
NPHP3-209ENST00000493732 ATP5IP56385 69 aaPredicted RBP8□□□□□ -1.13
NPHP3-209ENST00000493732 ELOBQ15370 118 aa8□□□□□ -1.13
NPHP3-209ENST00000493732 TMEM241Q24JQ0 296 aa8□□□□□ -1.13
NPHP3-209ENST00000493732 C1orf87Q8N0U7 546 aa8□□□□□ -1.13
NPHP3-209ENST00000493732 RBMXL3Q8N7X1 1067 aaKnown RBP8□□□□□ -1.13
NPHP3-209ENST00000493732 OR10A7Q8NGE5 316 aa8□□□□□ -1.13
NPHP3-209ENST00000493732 IFI27L2Q9H2X8 130 aa8□□□□□ -1.13
NPHP3-209ENST00000493732 LINC00574Q9H8X3 128 aa8□□□□□ -1.13
NPHP3-209ENST00000493732 HEYLQ9NQ87 328 aaPredicted RBP8□□□□□ -1.13
NPHP3-209ENST00000493732 GFOD1Q9NXC2 390 aa8□□□□□ -1.13
NPHP3-209ENST00000493732 WDR83OSQ9Y284 106 aa8□□□□□ -1.13
NPHP3-209ENST00000493732 URB1O60287 2271 aaKnown RBP8□□□□□ -1.13
NPHP3-209ENST00000493732 FREM2Q5SZK8 3169 aa8□□□□□ -1.13
NPHP3-209ENST00000493732 KLK10O43240 276 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 HRASP01112 189 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 IFNA10P01566 189 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 CD40P25942 277 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 FGF8P55075 233 aaPredicted RBP7.99□□□□□ -1.13
NPHP3-209ENST00000493732 LTC4SQ16873 150 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 MSMPQ1L6U9 139 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 ALKBH2Q6NS38 261 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 CYP2G1PQ6ZSU1 146 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 ZNRF1Q8ND25 227 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 CORO2AQ92828 525 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 ZDHHC16Q969W1 377 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 DCTN5Q9BTE1 182 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 QTRT1Q9BXR0 403 aaKnown RBP7.99□□□□□ -1.13
NPHP3-209ENST00000493732 GCM1Q9NP62 436 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 MUC3AQ02505 3323 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 IGHV3OR15-7A0A075B7D8 119 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 NKX6-3A6NJ46 265 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 C15orf62A8K5M9 175 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 SEC14L6B5MCN3 397 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 KBTBD11O94819 623 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 TFF1P04155 84 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 CD55P08174 381 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 OR9G9P0C7N8 305 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 FABP9Q0Z7S8 132 aa7.99□□□□□ -1.13
NPHP3-209ENST00000493732 WDR25Q64LD2 544 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms