RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 ARHGAP5-AS1Q96IT6 56 aa8.88□□□□□ -0.99
COL6A3-213ENST00000493475 PECRQ9BY49 303 aa8.88□□□□□ -0.99
COL6A3-213ENST00000493475 TINAGL1Q9GZM7 467 aaPredicted RBP8.88□□□□□ -0.99
COL6A3-213ENST00000493475 ACOT13Q9NPJ3 140 aa8.88□□□□□ -0.99
COL6A3-213ENST00000493475 SLC2A8Q9NY64 477 aa8.88□□□□□ -0.99
COL6A3-213ENST00000493475 SIGLEC8Q9NYZ4 499 aa8.88□□□□□ -0.99
COL6A3-213ENST00000493475 RAB22AQ9UL26 194 aa8.88□□□□□ -0.99
COL6A3-213ENST00000493475 MRPS7Q9Y2R9 242 aaKnown RBP8.88□□□□□ -0.99
COL6A3-213ENST00000493475 V9GY05 133 aa8.88□□□□□ -0.99
COL6A3-213ENST00000493475 LCE6AA0A183 80 aa8.87□□□□□ -0.99
COL6A3-213ENST00000493475 FAM223BA6NKX1 122 aa8.87□□□□□ -0.99
COL6A3-213ENST00000493475 SYNJ2BPP57105 145 aa8.87□□□□□ -0.99
COL6A3-213ENST00000493475 KLF5Q13887 457 aaPredicted RBP8.87□□□□□ -0.99
COL6A3-213ENST00000493475 FAM223AQ8IWN6 122 aa8.87□□□□□ -0.99
COL6A3-213ENST00000493475 LAX1Q8IWV1 398 aa8.87□□□□□ -0.99
COL6A3-213ENST00000493475 TEX45Q8NA69 505 aa8.87□□□□□ -0.99
COL6A3-213ENST00000493475 BVESQ8NE79 360 aa8.87□□□□□ -0.99
COL6A3-213ENST00000493475 DYNLRB2Q8TF09 96 aa8.87□□□□□ -0.99
COL6A3-213ENST00000493475 ACOT12Q8WYK0 555 aa8.87□□□□□ -0.99
COL6A3-213ENST00000493475 SPIN2AQ99865 258 aa8.87□□□□□ -0.99
COL6A3-213ENST00000493475 SPIN2BQ9BPZ2 258 aa8.87□□□□□ -0.99
COL6A3-213ENST00000493475 HDHD3Q9BSH5 251 aaPredicted RBP8.87□□□□□ -0.99
COL6A3-213ENST00000493475 CCDC90BQ9GZT6 254 aa8.87□□□□□ -0.99
COL6A3-213ENST00000493475 PARP12Q9H0J9 701 aaKnown RBP8.87□□□□□ -0.99
COL6A3-213ENST00000493475 PGPEP1Q9NXJ5 209 aa8.87□□□□□ -0.99
COL6A3-213ENST00000493475 PRELID3BQ9Y3B1 194 aa8.87□□□□□ -0.99
COL6A3-213ENST00000493475 AK6Q9Y3D8 172 aaKnown RBP8.87□□□□□ -0.99
COL6A3-213ENST00000493475 A0A0A6YYD4 124 aa8.86□□□□□ -0.99
COL6A3-213ENST00000493475 SHISA3A0PJX4 238 aa8.86□□□□□ -0.99
COL6A3-213ENST00000493475 CASQ2O14958 399 aaPredicted RBP8.86□□□□□ -0.99
COL6A3-213ENST00000493475 RGS10O43665 173 aa8.86□□□□□ -0.99
COL6A3-213ENST00000493475 SLC22A5O76082 557 aa8.86□□□□□ -0.99
COL6A3-213ENST00000493475 TPPPO94811 219 aa8.86□□□□□ -0.99
COL6A3-213ENST00000493475 DHFRP00374 187 aa8.86□□□□□ -0.99
COL6A3-213ENST00000493475 OR9G9P0C7N8 305 aa8.86□□□□□ -0.99
COL6A3-213ENST00000493475 CD37P11049 281 aa8.86□□□□□ -0.99
COL6A3-213ENST00000493475 MYL9P24844 172 aa8.86□□□□□ -0.99
COL6A3-213ENST00000493475 UBE2KP61086 200 aa8.86□□□□□ -0.99
COL6A3-213ENST00000493475 ATP5G2Q06055 141 aa8.86□□□□□ -0.99
COL6A3-213ENST00000493475 MLLT11Q13015 90 aaPredicted RBP8.86□□□□□ -0.99
COL6A3-213ENST00000493475 ARFRP1Q13795 201 aa8.86□□□□□ -0.99
COL6A3-213ENST00000493475 TNXAQ16473 311 aa8.86□□□□□ -0.99
COL6A3-213ENST00000493475 C2orf76Q3KRA6 126 aa8.86□□□□□ -0.99
COL6A3-213ENST00000493475 TMEM177Q53S58 311 aa8.86□□□□□ -0.99
COL6A3-213ENST00000493475 ZFAND6Q6FIF0 208 aa8.86□□□□□ -0.99
COL6A3-213ENST00000493475 ZNF343Q6P1L6 599 aa8.86□□□□□ -0.99
COL6A3-213ENST00000493475 OSR1Q8TAX0 266 aaPredicted RBP8.86□□□□□ -0.99
COL6A3-213ENST00000493475 DCUN1D5Q9BTE7 237 aa8.86□□□□□ -0.99
COL6A3-213ENST00000493475 VCX3BQ9H321 246 aa8.86□□□□□ -0.99
COL6A3-213ENST00000493475 KCNK15Q9H427 330 aa8.86□□□□□ -0.99
COL6A3-213ENST00000493475 C19orf73Q9NVV2 129 aa8.86□□□□□ -0.99
COL6A3-213ENST00000493475 SDHAF2Q9NX18 166 aa8.86□□□□□ -0.99
COL6A3-213ENST00000493475 BLOC1S6Q9UL45 172 aa8.86□□□□□ -0.99
COL6A3-213ENST00000493475 DPPA5A6NC42 116 aa8.85□□□□□ -0.99
COL6A3-213ENST00000493475 MSGN1A6NI15 193 aa8.85□□□□□ -0.99
COL6A3-213ENST00000493475 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.85□□□□□ -0.99
COL6A3-213ENST00000493475 FCGR3AP08637 254 aa8.85□□□□□ -0.99
COL6A3-213ENST00000493475 CTXN2P0C2S0 81 aa8.85□□□□□ -0.99
COL6A3-213ENST00000493475 GSTT2P0CG29 244 aa8.85□□□□□ -0.99
COL6A3-213ENST00000493475 GSTT2BP0CG30 244 aa8.85□□□□□ -0.99
COL6A3-213ENST00000493475 CD36P16671 472 aa8.85□□□□□ -0.99
COL6A3-213ENST00000493475 HAPLN4Q86UW8 402 aa8.85□□□□□ -0.99
COL6A3-213ENST00000493475 Q8N1Y9 231 aa8.85□□□□□ -0.99
COL6A3-213ENST00000493475 VSTM2AQ8TAG5 236 aa8.85□□□□□ -0.99
COL6A3-213ENST00000493475 CABLES2Q9BTV7 478 aa8.85□□□□□ -0.99
COL6A3-213ENST00000493475 LSM2Q9Y333 95 aaKnown RBP8.85□□□□□ -0.99
COL6A3-213ENST00000493475 TRBV6-7A0A0A0MS04 114 aa8.84□□□□□ -0.99
COL6A3-213ENST00000493475 SCGNO76038 276 aa8.84□□□□□ -0.99
COL6A3-213ENST00000493475 CRYZL1O95825 349 aa8.84□□□□□ -0.99
COL6A3-213ENST00000493475 RAB6AP20340 208 aa8.84□□□□□ -0.99
COL6A3-213ENST00000493475 TMEM50BP56557 158 aa8.84□□□□□ -0.99
COL6A3-213ENST00000493475 LAIR2Q6ISS4 152 aa8.84□□□□□ -0.99
COL6A3-213ENST00000493475 MMD2Q8IY49 270 aa8.84□□□□□ -0.99
COL6A3-213ENST00000493475 NECAP1Q8NC96 275 aa8.84□□□□□ -0.99
COL6A3-213ENST00000493475 OR10R2Q8NGX6 335 aa8.84□□□□□ -0.99
COL6A3-213ENST00000493475 SRSF12Q8WXF0 261 aaKnown RBP8.84□□□□□ -0.99
COL6A3-213ENST00000493475 AIFM2Q9BRQ8 373 aa8.84□□□□□ -0.99
COL6A3-213ENST00000493475 KRTAP9-2Q9BYQ4 174 aa8.84□□□□□ -0.99
COL6A3-213ENST00000493475 A0A075B6Q4 140 aa8.83□□□□□ -1
COL6A3-213ENST00000493475 IGKV1-6A0A0C4DH72 117 aa8.83□□□□□ -1
COL6A3-213ENST00000493475 FOXI3A8MTJ6 420 aaPredicted RBP8.83□□□□□ -1
COL6A3-213ENST00000493475 IGLV2-23P01705 113 aa8.83□□□□□ -1
COL6A3-213ENST00000493475 HIST1H1DP16402 221 aaKnown RBP8.83□□□□□ -1
COL6A3-213ENST00000493475 CLDN12P56749 244 aa8.83□□□□□ -1
COL6A3-213ENST00000493475 CD81P60033 236 aa8.83□□□□□ -1
COL6A3-213ENST00000493475 RPS25P62851 125 aaKnown RBP8.83□□□□□ -1
COL6A3-213ENST00000493475 RHOGP84095 191 aa8.83□□□□□ -1
COL6A3-213ENST00000493475 EXOSC2Q13868 293 aaKnown RBP8.83□□□□□ -1
COL6A3-213ENST00000493475 PRSS8Q16651 343 aa8.83□□□□□ -1
COL6A3-213ENST00000493475 HAGHQ16775 308 aa8.83□□□□□ -1
COL6A3-213ENST00000493475 IGSF11Q5DX21 431 aa8.83□□□□□ -1
COL6A3-213ENST00000493475 PLAC9Q5JTB6 97 aa8.83□□□□□ -1
COL6A3-213ENST00000493475 HES5Q5TA89 166 aa8.83□□□□□ -1
COL6A3-213ENST00000493475 SLC16A13Q7RTY0 426 aa8.83□□□□□ -1
COL6A3-213ENST00000493475 PRSS48Q7RTY5 328 aa8.83□□□□□ -1
COL6A3-213ENST00000493475 MGLLQ99685 303 aa8.83□□□□□ -1
COL6A3-213ENST00000493475 EDA2RQ9HAV5 297 aa8.83□□□□□ -1
COL6A3-213ENST00000493475 TECRQ9NZ01 308 aaKnown RBP8.83□□□□□ -1
COL6A3-213ENST00000493475 CEPT1Q9Y6K0 416 aa8.83□□□□□ -1
COL6A3-213ENST00000493475 TRAV1-2A0A0B4J238 106 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms