RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, human

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-222	ENST00000492423	SLC35D1	Q9NTN3	355 aa		12.04	□□□□□ -0.48
COPS7B-222	ENST00000492423	DPM3	Q9P2X0	92 aa		12.04	□□□□□ -0.48
COPS7B-222	ENST00000492423	PRELID3B	Q9Y3B1	194 aa		12.04	□□□□□ -0.48
COPS7B-222	ENST00000492423	AUP1	Q9Y679	476 aa		12.04	□□□□□ -0.48
COPS7B-222	ENST00000492423	LEUTX	A8MZ59	168 aa		12.03	□□□□□ -0.48
COPS7B-222	ENST00000492423	IGKV1-5	P01602	117 aa		12.03	□□□□□ -0.48
COPS7B-222	ENST00000492423	GIP	P09681	153 aa	Predicted RBP	12.03	□□□□□ -0.48
COPS7B-222	ENST00000492423	NMS	Q5H8A3	153 aa		12.03	□□□□□ -0.48
COPS7B-222	ENST00000492423	MINOS1	Q5TGZ0	78 aa		12.03	□□□□□ -0.48
COPS7B-222	ENST00000492423	GSG1L	Q6UXU4	331 aa		12.03	□□□□□ -0.48
COPS7B-222	ENST00000492423	TCTE3	Q8IZS6	198 aa		12.03	□□□□□ -0.48
COPS7B-222	ENST00000492423	DYNAP	Q8N1N2	210 aa		12.03	□□□□□ -0.48
COPS7B-222	ENST00000492423	C17orf50	Q8WW18	174 aa		12.03	□□□□□ -0.48
COPS7B-222	ENST00000492423	RPE	Q96AT9	228 aa		12.03	□□□□□ -0.48
COPS7B-222	ENST00000492423	AJUBA	Q96IF1	538 aa		12.03	□□□□□ -0.48
COPS7B-222	ENST00000492423	CHIA	Q9BZP6	476 aa		12.03	□□□□□ -0.48
COPS7B-222	ENST00000492423	TMED3	Q9Y3Q3	217 aa		12.03	□□□□□ -0.48
COPS7B-222	ENST00000492423	TBL2	Q9Y4P3	447 aa	Known RBP	12.03	□□□□□ -0.48
COPS7B-222	ENST00000492423	MINOS1-NBL1	R4GNA1	71 aa		12.03	□□□□□ -0.48
COPS7B-222	ENST00000492423	TRAV40	A0A0B4J280	105 aa		12.02	□□□□□ -0.49
COPS7B-222	ENST00000492423	IGHV1-3	A0A0C4DH29	117 aa		12.02	□□□□□ -0.49
COPS7B-222	ENST00000492423		G3V3Q6	166 aa		12.02	□□□□□ -0.49
COPS7B-222	ENST00000492423	TXNL1	O43396	289 aa		12.02	□□□□□ -0.49
COPS7B-222	ENST00000492423	HPRT1	P00492	218 aa		12.02	□□□□□ -0.49
COPS7B-222	ENST00000492423	TGFA	P01135	160 aa		12.02	□□□□□ -0.49
COPS7B-222	ENST00000492423	GAPDH	P04406	335 aa	Known RBP	12.02	□□□□□ -0.49
COPS7B-222	ENST00000492423		P0C879	139 aa		12.02	□□□□□ -0.49
COPS7B-222	ENST00000492423	OR4S2	Q8NH73	311 aa		12.02	□□□□□ -0.49
COPS7B-222	ENST00000492423	CD300LF	Q8TDQ1	290 aa		12.02	□□□□□ -0.49
COPS7B-222	ENST00000492423	SEC22A	Q96IW7	307 aa		12.02	□□□□□ -0.49
COPS7B-222	ENST00000492423	C7orf69	Q9H7B7	122 aa		12.02	□□□□□ -0.49
COPS7B-222	ENST00000492423	PLEKHA2	Q9HB19	425 aa		12.02	□□□□□ -0.49
COPS7B-222	ENST00000492423	COMMD9	Q9P000	198 aa		12.02	□□□□□ -0.49
COPS7B-222	ENST00000492423	TET2	Q6N021	2002 aa	Predicted RBP	12.02	□□□□□ -0.49
COPS7B-222	ENST00000492423	PDZD2	O15018	2839 aa		12.02	□□□□□ -0.49
COPS7B-222	ENST00000492423	OTOG	Q6ZRI0	2925 aa		12.01	□□□□□ -0.49
COPS7B-222	ENST00000492423	IGHV3OR16-10	A0A075B7F0	116 aa		12.01	□□□□□ -0.49
COPS7B-222	ENST00000492423	IGHV1-69D	A0A0B4J2H0	117 aa		12.01	□□□□□ -0.49
COPS7B-222	ENST00000492423	C5orf51	A6NDU8	294 aa		12.01	□□□□□ -0.49
COPS7B-222	ENST00000492423	FAM25E	A8MYX2	175 aa		12.01	□□□□□ -0.49
COPS7B-222	ENST00000492423	SMLR1	H3BR10	107 aa		12.01	□□□□□ -0.49
COPS7B-222	ENST00000492423		J3QLI3	93 aa		12.01	□□□□□ -0.49
COPS7B-222	ENST00000492423	NPFF	O15130	113 aa		12.01	□□□□□ -0.49
COPS7B-222	ENST00000492423	CRYZL1	O95825	349 aa		12.01	□□□□□ -0.49
COPS7B-222	ENST00000492423	IFNA21	P01568	189 aa		12.01	□□□□□ -0.49
COPS7B-222	ENST00000492423	IGHV1-69	P01742	117 aa		12.01	□□□□□ -0.49
COPS7B-222	ENST00000492423	APOA2	P02652	100 aa		12.01	□□□□□ -0.49
COPS7B-222	ENST00000492423	VDAC1	P21796	283 aa		12.01	□□□□□ -0.49
COPS7B-222	ENST00000492423	CEACAM3	P40198	252 aa		12.01	□□□□□ -0.49
COPS7B-222	ENST00000492423	IL15RA	Q13261	267 aa		12.01	□□□□□ -0.49
COPS7B-222	ENST00000492423	RUSC1-AS1	Q66K80	236 aa		12.01	□□□□□ -0.49
COPS7B-222	ENST00000492423	DHRS7B	Q6IAN0	325 aa	Predicted RBP	12.01	□□□□□ -0.49
COPS7B-222	ENST00000492423	CFHR4	Q92496	578 aa		12.01	□□□□□ -0.49
COPS7B-222	ENST00000492423	LSM10	Q969L4	123 aa	Known RBP	12.01	□□□□□ -0.49
COPS7B-222	ENST00000492423	GPR146	Q96CH1	333 aa		12.01	□□□□□ -0.49
COPS7B-222	ENST00000492423	R3HDM4	Q96D70	268 aa		12.01	□□□□□ -0.49
COPS7B-222	ENST00000492423	C2orf50	Q96LR7	162 aa		12.01	□□□□□ -0.49
COPS7B-222	ENST00000492423	IGHV3-72	A0A0B4J1Y9	119 aa		12	□□□□□ -0.49
COPS7B-222	ENST00000492423	C13orf42	A0A1B0GVH6	325 aa		12	□□□□□ -0.49
COPS7B-222	ENST00000492423	OOSP1	A8MZH6	123 aa		12	□□□□□ -0.49
COPS7B-222	ENST00000492423	BOLA2-SMG1P6	H3BVE0	249 aa		12	□□□□□ -0.49
COPS7B-222	ENST00000492423	WIPF1	O43516	503 aa		12	□□□□□ -0.49
COPS7B-222	ENST00000492423	IGKV1-16	P04430	117 aa		12	□□□□□ -0.49
COPS7B-222	ENST00000492423	IGHV4-38-2	P0DP08	117 aa		12	□□□□□ -0.49
COPS7B-222	ENST00000492423	RRAS	P10301	218 aa		12	□□□□□ -0.49
COPS7B-222	ENST00000492423	PAX6	P26367	422 aa		12	□□□□□ -0.49
COPS7B-222	ENST00000492423	SAA4	P35542	130 aa		12	□□□□□ -0.49
COPS7B-222	ENST00000492423	G6PC	P35575	357 aa		12	□□□□□ -0.49
COPS7B-222	ENST00000492423	AKR1C2	P52895	323 aa		12	□□□□□ -0.49
COPS7B-222	ENST00000492423	RAP2B	P61225	183 aa		12	□□□□□ -0.49
COPS7B-222	ENST00000492423	TAGLN	Q01995	201 aa	Known RBP	12	□□□□□ -0.49
COPS7B-222	ENST00000492423	HABP2	Q14520	560 aa	Predicted RBP	12	□□□□□ -0.49
COPS7B-222	ENST00000492423	POU2AF1	Q16633	256 aa		12	□□□□□ -0.49
COPS7B-222	ENST00000492423	RTL8B	Q17RB0	113 aa		12	□□□□□ -0.49
COPS7B-222	ENST00000492423	IZUMO4	Q1ZYL8	232 aa		12	□□□□□ -0.49
COPS7B-222	ENST00000492423	IAH1	Q2TAA2	248 aa	Predicted RBP	12	□□□□□ -0.49
COPS7B-222	ENST00000492423	MIDN	Q504T8	468 aa		12	□□□□□ -0.49
COPS7B-222	ENST00000492423	TMEM177	Q53S58	311 aa		12	□□□□□ -0.49
COPS7B-222	ENST00000492423	KLF17	Q5JT82	389 aa	Predicted RBP	12	□□□□□ -0.49
COPS7B-222	ENST00000492423	CYB5R2	Q6BCY4	276 aa		12	□□□□□ -0.49
COPS7B-222	ENST00000492423	PDPN	Q86YL7	162 aa		12	□□□□□ -0.49
COPS7B-222	ENST00000492423	OR8H3	Q8N146	312 aa		12	□□□□□ -0.49
COPS7B-222	ENST00000492423	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	12	□□□□□ -0.49
COPS7B-222	ENST00000492423	ASB13	Q8WXK3	278 aa		12	□□□□□ -0.49
COPS7B-222	ENST00000492423	PDCD10	Q9BUL8	212 aa		12	□□□□□ -0.49
COPS7B-222	ENST00000492423	NMES1	Q9C002	83 aa		12	□□□□□ -0.49
COPS7B-222	ENST00000492423	WASHC3	Q9Y3C0	194 aa		12	□□□□□ -0.49
COPS7B-222	ENST00000492423	HILPDA	Q9Y5L2	63 aa		12	□□□□□ -0.49
COPS7B-222	ENST00000492423	PIGBOS1	A0A0B4J2F0	54 aa		11.99	□□□□□ -0.49
COPS7B-222	ENST00000492423	TIMM23	O14925	209 aa		11.99	□□□□□ -0.49
COPS7B-222	ENST00000492423	SMAD7	O15105	426 aa	Known RBP	11.99	□□□□□ -0.49
COPS7B-222	ENST00000492423	LGALS4	P56470	323 aa		11.99	□□□□□ -0.49
COPS7B-222	ENST00000492423	KRTAP1-1	Q07627	177 aa		11.99	□□□□□ -0.49
COPS7B-222	ENST00000492423		Q5BKY6	102 aa		11.99	□□□□□ -0.49
COPS7B-222	ENST00000492423		Q6ZRM9	215 aa		11.99	□□□□□ -0.49
COPS7B-222	ENST00000492423	MOB3B	Q86TA1	216 aa		11.99	□□□□□ -0.49
COPS7B-222	ENST00000492423	OR4D5	Q8NGN0	318 aa		11.99	□□□□□ -0.49
COPS7B-222	ENST00000492423	RANBP3	Q9H6Z4	567 aa	Predicted RBP	11.99	□□□□□ -0.49
COPS7B-222	ENST00000492423	ITGB1BP2	Q9UKP3	347 aa		11.99	□□□□□ -0.49
COPS7B-222	ENST00000492423	MMP24	Q9Y5R2	645 aa		11.99	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms