RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 FOXRED2Q8IWF2 684 aa11.91□□□□□ -0.5
SS18L1-204ENST00000491916 MFSD4AQ8N468 514 aa11.91□□□□□ -0.5
SS18L1-204ENST00000491916 OR5H2Q8NGV7 314 aa11.91□□□□□ -0.5
SS18L1-204ENST00000491916 TSNAXQ99598 290 aaKnown RBP11.91□□□□□ -0.5
SS18L1-204ENST00000491916 ZNF2Q9BSG1 426 aaPredicted RBP11.91□□□□□ -0.5
SS18L1-204ENST00000491916 C6orf62Q9GZU0 229 aaPredicted RBP11.91□□□□□ -0.5
SS18L1-204ENST00000491916 SLC5A7Q9GZV3 580 aa11.91□□□□□ -0.5
SS18L1-204ENST00000491916 FXYD6Q9H0Q3 95 aa11.91□□□□□ -0.5
SS18L1-204ENST00000491916 KIAA1456Q9P272 454 aa11.91□□□□□ -0.5
SS18L1-204ENST00000491916 METTL1Q9UBP6 276 aaKnown RBP11.91□□□□□ -0.5
SS18L1-204ENST00000491916 G3V318 75 aa11.9□□□□□ -0.5
SS18L1-204ENST00000491916 GABARAPH6UMI1 98 aa11.9□□□□□ -0.5
SS18L1-204ENST00000491916 M0QZ24 198 aa11.9□□□□□ -0.5
SS18L1-204ENST00000491916 ARPC1BO15143 372 aaKnown RBP11.9□□□□□ -0.5
SS18L1-204ENST00000491916 CTDSPLO15194 276 aa11.9□□□□□ -0.5
SS18L1-204ENST00000491916 SLC25A17O43808 307 aa11.9□□□□□ -0.5
SS18L1-204ENST00000491916 CRYZL1O95825 349 aa11.9□□□□□ -0.5
SS18L1-204ENST00000491916 RRASP10301 218 aa11.9□□□□□ -0.5
SS18L1-204ENST00000491916 FXYD4P59646 89 aa11.9□□□□□ -0.5
SS18L1-204ENST00000491916 VAX1Q5SQQ9 334 aa11.9□□□□□ -0.5
SS18L1-204ENST00000491916 TREML4Q6UXN2 200 aa11.9□□□□□ -0.5
SS18L1-204ENST00000491916 KCTD9Q7L273 389 aa11.9□□□□□ -0.5
SS18L1-204ENST00000491916 RNF152Q8N8N0 203 aa11.9□□□□□ -0.5
SS18L1-204ENST00000491916 MCFD2Q8NI22 146 aa11.9□□□□□ -0.5
SS18L1-204ENST00000491916 DIRAS2Q96HU8 199 aa11.9□□□□□ -0.5
SS18L1-204ENST00000491916 HARBI1Q96MB7 349 aa11.9□□□□□ -0.5
SS18L1-204ENST00000491916 HSD17B10Q99714 261 aaKnown RBP11.9□□□□□ -0.5
SS18L1-204ENST00000491916 DCUN1D5Q9BTE7 237 aa11.9□□□□□ -0.5
SS18L1-204ENST00000491916 NOTCH1P46531 2555 aa11.9□□□□□ -0.5
SS18L1-204ENST00000491916 MEGF8Q7Z7M0 2845 aa11.9□□□□□ -0.5
SS18L1-204ENST00000491916 DPPA5A6NC42 116 aa11.89□□□□□ -0.51
SS18L1-204ENST00000491916 CCDC160A6NGH7 325 aa11.89□□□□□ -0.51
SS18L1-204ENST00000491916 M0QYG6 137 aa11.89□□□□□ -0.51
SS18L1-204ENST00000491916 TNFSF12O43508 249 aa11.89□□□□□ -0.51
SS18L1-204ENST00000491916 FCGR3BO75015 233 aa11.89□□□□□ -0.51
SS18L1-204ENST00000491916 IGHG4P01861 327 aa11.89□□□□□ -0.51
SS18L1-204ENST00000491916 CD74P04233 296 aa11.89□□□□□ -0.51
SS18L1-204ENST00000491916 CD3DP04234 171 aa11.89□□□□□ -0.51
SS18L1-204ENST00000491916 KIAA0141Q14154 515 aaPredicted RBP11.89□□□□□ -0.51
SS18L1-204ENST00000491916 RTL8BQ17RB0 113 aa11.89□□□□□ -0.51
SS18L1-204ENST00000491916 C2orf68Q2NKX9 166 aa11.89□□□□□ -0.51
SS18L1-204ENST00000491916 NSUN5P1Q3KNT7 163 aa11.89□□□□□ -0.51
SS18L1-204ENST00000491916 AADACL3Q5VUY0 350 aa11.89□□□□□ -0.51
SS18L1-204ENST00000491916 ZNF562Q6V9R5 426 aa11.89□□□□□ -0.51
SS18L1-204ENST00000491916 ZNF66Q6ZN08 573 aa11.89□□□□□ -0.51
SS18L1-204ENST00000491916 C18orf65Q6ZTR6 163 aa11.89□□□□□ -0.51
SS18L1-204ENST00000491916 MINDY2Q8NBR6 621 aa11.89□□□□□ -0.51
SS18L1-204ENST00000491916 ZBTB34Q8NCN2 500 aa11.89□□□□□ -0.51
SS18L1-204ENST00000491916 OR4D10Q8NGI6 311 aa11.89□□□□□ -0.51
SS18L1-204ENST00000491916 SMIM4Q8WVI0 70 aa11.89□□□□□ -0.51
SS18L1-204ENST00000491916 CLCC1Q96S66 551 aa11.89□□□□□ -0.51
SS18L1-204ENST00000491916 TINAGL1Q9GZM7 467 aaPredicted RBP11.89□□□□□ -0.51
SS18L1-204ENST00000491916 TAS2R8Q9NYW2 309 aa11.89□□□□□ -0.51
SS18L1-204ENST00000491916 NUBP2Q9Y5Y2 271 aa11.89□□□□□ -0.51
SS18L1-204ENST00000491916 NOTCH3Q9UM47 2321 aa11.88□□□□□ -0.51
SS18L1-204ENST00000491916 TCRBV4S1A1TA0A5B7 111 aa11.88□□□□□ -0.51
SS18L1-204ENST00000491916 SHOXO15266 292 aa11.88□□□□□ -0.51
SS18L1-204ENST00000491916 CA2P00918 260 aa11.88□□□□□ -0.51
SS18L1-204ENST00000491916 CSF1P09603 554 aa11.88□□□□□ -0.51
SS18L1-204ENST00000491916 PSMB8P28062 276 aa11.88□□□□□ -0.51
SS18L1-204ENST00000491916 OR2B11Q5JQS5 317 aa11.88□□□□□ -0.51
SS18L1-204ENST00000491916 PYHIN1Q6K0P9 492 aa11.88□□□□□ -0.51
SS18L1-204ENST00000491916 LCNL1Q6ZST4 164 aa11.88□□□□□ -0.51
SS18L1-204ENST00000491916 PPP1R27Q86WC6 154 aa11.88□□□□□ -0.51
SS18L1-204ENST00000491916 LHFPL1Q86WI0 220 aa11.88□□□□□ -0.51
SS18L1-204ENST00000491916 TMEM17Q86X19 198 aa11.88□□□□□ -0.51
SS18L1-204ENST00000491916 OR4X2Q8NGF9 303 aa11.88□□□□□ -0.51
SS18L1-204ENST00000491916 OR6F1Q8NGZ6 308 aa11.88□□□□□ -0.51
SS18L1-204ENST00000491916 OSR1Q8TAX0 266 aaPredicted RBP11.88□□□□□ -0.51
SS18L1-204ENST00000491916 MYOZ3Q8TDC0 251 aa11.88□□□□□ -0.51
SS18L1-204ENST00000491916 C15orf40Q8WUR7 153 aa11.88□□□□□ -0.51
SS18L1-204ENST00000491916 FCAMRQ8WWV6 532 aa11.88□□□□□ -0.51
SS18L1-204ENST00000491916 MMP27Q9H306 513 aa11.88□□□□□ -0.51
SS18L1-204ENST00000491916 TSSC4Q9Y5U2 329 aaPredicted RBP11.88□□□□□ -0.51
SS18L1-204ENST00000491916 WSB1Q9Y6I7 421 aa11.88□□□□□ -0.51
SS18L1-204ENST00000491916 A3GALT2U3KPV4 340 aa11.88□□□□□ -0.51
SS18L1-204ENST00000491916 A0A1W2PRX2 142 aa11.87□□□□□ -0.51
SS18L1-204ENST00000491916 GSTZ1O43708 216 aaPredicted RBP11.87□□□□□ -0.51
SS18L1-204ENST00000491916 SOX15O60248 233 aa11.87□□□□□ -0.51
SS18L1-204ENST00000491916 RAMP3O60896 148 aa11.87□□□□□ -0.51
SS18L1-204ENST00000491916 IGLV1-40P01703 118 aa11.87□□□□□ -0.51
SS18L1-204ENST00000491916 ZNF735P0CB33 412 aa11.87□□□□□ -0.51
SS18L1-204ENST00000491916 UBE2KP61086 200 aa11.87□□□□□ -0.51
SS18L1-204ENST00000491916 HERV-K104P61576 105 aa11.87□□□□□ -0.51
SS18L1-204ENST00000491916 MRPS10P82664 201 aaKnown RBP11.87□□□□□ -0.51
SS18L1-204ENST00000491916 FOXE3Q13461 319 aa11.87□□□□□ -0.51
SS18L1-204ENST00000491916 TEX45Q8NA69 505 aa11.87□□□□□ -0.51
SS18L1-204ENST00000491916 TMEM229BQ8NBD8 167 aa11.87□□□□□ -0.51
SS18L1-204ENST00000491916 FAM110DQ8TAY7 271 aaPredicted RBP11.87□□□□□ -0.51
SS18L1-204ENST00000491916 TCTEX1D2Q8WW35 142 aa11.87□□□□□ -0.51
SS18L1-204ENST00000491916 MRGPRFQ96AM1 343 aa11.87□□□□□ -0.51
SS18L1-204ENST00000491916 DGCR14Q96DF8 476 aaKnown RBP11.87□□□□□ -0.51
SS18L1-204ENST00000491916 PARP11Q9NR21 331 aa11.87□□□□□ -0.51
SS18L1-204ENST00000491916 PRELID3BQ9Y3B1 194 aa11.87□□□□□ -0.51
SS18L1-204ENST00000491916 TRAV41A0A0B4J266 112 aa11.86□□□□□ -0.51
SS18L1-204ENST00000491916 PGLYRP1O75594 196 aaPredicted RBP11.86□□□□□ -0.51
SS18L1-204ENST00000491916 OPN1MWP04001 364 aa11.86□□□□□ -0.51
SS18L1-204ENST00000491916 RPLP1P05386 114 aaKnown RBP11.86□□□□□ -0.51
SS18L1-204ENST00000491916 SAA1P0DJI8 122 aaPredicted RBP11.86□□□□□ -0.51
SS18L1-204ENST00000491916 OPN1MW2P0DN77 364 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms