RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 GALMQ96C23 342 aa1.59□□□□□ -2.15
VTA1-204ENST00000491881 KLF6Q99612 283 aaPredicted RBP1.59□□□□□ -2.15
VTA1-204ENST00000491881 EBNA1BP2Q99848 306 aaKnown RBP1.59□□□□□ -2.15
VTA1-204ENST00000491881 AICDAQ9GZX7 198 aa1.59□□□□□ -2.15
VTA1-204ENST00000491881 COMMD9Q9P000 198 aa1.59□□□□□ -2.15
VTA1-204ENST00000491881 POFUT2Q9Y2G5 429 aa1.59□□□□□ -2.15
VTA1-204ENST00000491881 LTBP2Q14767 1821 aa1.59□□□□□ -2.16
VTA1-204ENST00000491881 ALS2Q96Q42 1657 aa1.58□□□□□ -2.16
VTA1-204ENST00000491881 DICER1Q9UPY3 1922 aaKnown RBP1.58□□□□□ -2.16
VTA1-204ENST00000491881 MBD5Q9P267 1494 aa1.58□□□□□ -2.16
VTA1-204ENST00000491881 KDM3BQ7LBC6 1761 aa1.58□□□□□ -2.16
VTA1-204ENST00000491881 LOC102725191A0A1B0GVB3 256 aa1.58□□□□□ -2.16
VTA1-204ENST00000491881 IGSF23A1L1A6 192 aa1.58□□□□□ -2.16
VTA1-204ENST00000491881 A8MWP6 167 aa1.58□□□□□ -2.16
VTA1-204ENST00000491881 SGCEO43556 437 aa1.58□□□□□ -2.16
VTA1-204ENST00000491881 CDK14O94921 469 aa1.58□□□□□ -2.16
VTA1-204ENST00000491881 PRB1P04280 392 aa1.58□□□□□ -2.16
VTA1-204ENST00000491881 FBP1P09467 338 aa1.58□□□□□ -2.16
VTA1-204ENST00000491881 OR4A8P0C604 315 aa1.58□□□□□ -2.16
VTA1-204ENST00000491881 COILP38432 576 aaPredicted RBP1.58□□□□□ -2.16
VTA1-204ENST00000491881 OR10A3P58181 314 aa1.58□□□□□ -2.16
VTA1-204ENST00000491881 DYNLL1P63167 89 aaKnown RBP1.58□□□□□ -2.16
VTA1-204ENST00000491881 MAPK14Q16539 360 aa1.58□□□□□ -2.16
VTA1-204ENST00000491881 EBLN2Q6P2I7 272 aa1.58□□□□□ -2.16
VTA1-204ENST00000491881 MUC15Q8N387 334 aa1.58□□□□□ -2.16
VTA1-204ENST00000491881 SPERTQ8NA61 448 aa1.58□□□□□ -2.16
VTA1-204ENST00000491881 ARHGEF10O15013 1369 aa1.58□□□□□ -2.16
VTA1-204ENST00000491881 ZNF831Q5JPB2 1677 aa1.58□□□□□ -2.16
VTA1-204ENST00000491881 MAP1AP78559 2803 aaPredicted RBP1.57□□□□□ -2.16
VTA1-204ENST00000491881 IFI30P13284 250 aa1.57□□□□□ -2.16
VTA1-204ENST00000491881 SYT1P21579 422 aa1.57□□□□□ -2.16
VTA1-204ENST00000491881 SULT1A2P50226 295 aa1.57□□□□□ -2.16
VTA1-204ENST00000491881 AKR1C2P52895 323 aa1.57□□□□□ -2.16
VTA1-204ENST00000491881 DEFA6Q01524 100 aa1.57□□□□□ -2.16
VTA1-204ENST00000491881 FOXF1Q12946 379 aa1.57□□□□□ -2.16
VTA1-204ENST00000491881 USF2Q15853 346 aaPredicted RBP1.57□□□□□ -2.16
VTA1-204ENST00000491881 TMEM249Q2WGJ8 235 aa1.57□□□□□ -2.16
VTA1-204ENST00000491881 HENMT1Q5T8I9 393 aaKnown RBP1.57□□□□□ -2.16
VTA1-204ENST00000491881 HES3Q5TGS1 186 aa1.57□□□□□ -2.16
VTA1-204ENST00000491881 COPS6Q7L5N1 327 aa1.57□□□□□ -2.16
VTA1-204ENST00000491881 TMEM25Q86YD3 366 aa1.57□□□□□ -2.16
VTA1-204ENST00000491881 TCAIMQ8N3R3 496 aa1.57□□□□□ -2.16
VTA1-204ENST00000491881 OR5D18Q8NGL1 313 aa1.57□□□□□ -2.16
VTA1-204ENST00000491881 OR4P4Q8NGL7 312 aa1.57□□□□□ -2.16
VTA1-204ENST00000491881 CD200R1Q8TD46 325 aa1.57□□□□□ -2.16
VTA1-204ENST00000491881 RORBQ92753 470 aa1.57□□□□□ -2.16
VTA1-204ENST00000491881 PPWD1Q96BP3 646 aaKnown RBP1.57□□□□□ -2.16
VTA1-204ENST00000491881 TMEM106BQ9NUM4 274 aa1.57□□□□□ -2.16
VTA1-204ENST00000491881 SCML1Q9UN30 329 aa1.57□□□□□ -2.16
VTA1-204ENST00000491881 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.57□□□□□ -2.161e-6■■■■□ 25.3
VTA1-204ENST00000491881 KIF1AQ12756 1690 aa1.57□□□□□ -2.16
VTA1-204ENST00000491881 LRPPRCP42704 1394 aaKnown RBP1.57□□□□□ -2.16
VTA1-204ENST00000491881 A0A0G2JMZ2 1700 aa1.57□□□□□ -2.16
VTA1-204ENST00000491881 ASXL3Q9C0F0 2248 aa1.56□□□□□ -2.16
VTA1-204ENST00000491881 IGKV1-12A0A0C4DH73 117 aa1.56□□□□□ -2.16
VTA1-204ENST00000491881 K7ERQ8 282 aa1.56□□□□□ -2.16
VTA1-204ENST00000491881 GPR171O14626 319 aa1.56□□□□□ -2.16
VTA1-204ENST00000491881 OVOL1O14753 267 aa1.56□□□□□ -2.16
VTA1-204ENST00000491881 PHYHO14832 338 aa1.56□□□□□ -2.16
VTA1-204ENST00000491881 YKT6O15498 198 aa1.56□□□□□ -2.16
VTA1-204ENST00000491881 IGKV1D-12P01611 117 aa1.56□□□□□ -2.16
VTA1-204ENST00000491881 CRYGDP07320 174 aa1.56□□□□□ -2.16
VTA1-204ENST00000491881 SLC35E2BP0CK96 405 aa1.56□□□□□ -2.16
VTA1-204ENST00000491881 LIMS3P0CW19 117 aa1.56□□□□□ -2.16
VTA1-204ENST00000491881 LIMS4P0CW20 117 aa1.56□□□□□ -2.16
VTA1-204ENST00000491881 P0DMU3 169 aa1.56□□□□□ -2.16
VTA1-204ENST00000491881 FAM231AP0DMU4 169 aa1.56□□□□□ -2.16
VTA1-204ENST00000491881 FAM231CP0DMU5 169 aa1.56□□□□□ -2.16
VTA1-204ENST00000491881 CTSEP14091 401 aa1.56□□□□□ -2.16
VTA1-204ENST00000491881 CPMP14384 443 aa1.56□□□□□ -2.16
VTA1-204ENST00000491881 NQO1P15559 274 aaKnown RBP1.56□□□□□ -2.16
VTA1-204ENST00000491881 MAGEA6P43360 314 aa1.56□□□□□ -2.16
VTA1-204ENST00000491881 CENPWQ5EE01 88 aa1.56□□□□□ -2.16
VTA1-204ENST00000491881 TTC33Q6PID6 262 aaPredicted RBP1.56□□□□□ -2.16
VTA1-204ENST00000491881 CCDC12Q8WUD4 166 aaPredicted RBP1.56□□□□□ -2.16
VTA1-204ENST00000491881 TMEM216Q9P0N5 145 aa1.56□□□□□ -2.16
VTA1-204ENST00000491881 FIS1Q9Y3D6 152 aa1.56□□□□□ -2.16
VTA1-204ENST00000491881 USP42Q9H9J4 1324 aaKnown RBP1.56□□□□□ -2.16
VTA1-204ENST00000491881 MED13LQ71F56 2210 aa1.56□□□□□ -2.16
VTA1-204ENST00000491881 BRWD1Q9NSI6 2320 aa1.56□□□□□ -2.16
VTA1-204ENST00000491881 CCDC88AQ3V6T2 1871 aa1.56□□□□□ -2.16
VTA1-204ENST00000491881 CDC42BPGQ6DT37 1551 aa1.55□□□□□ -2.16
VTA1-204ENST00000491881 COL6A6A6NMZ7 2263 aa1.55□□□□□ -2.16
VTA1-204ENST00000491881 XRN1Q8IZH2 1706 aaKnown RBP1.55□□□□□ -2.16
VTA1-204ENST00000491881 CACNA1EQ15878 2313 aa1.55□□□□□ -2.16
VTA1-204ENST00000491881 H3BSA7 217 aa1.55□□□□□ -2.16
VTA1-204ENST00000491881 J3QLI3 93 aa1.55□□□□□ -2.16
VTA1-204ENST00000491881 IGKV1-16P04430 117 aa1.55□□□□□ -2.16
VTA1-204ENST00000491881 GADD45AP24522 165 aa1.55□□□□□ -2.16
VTA1-204ENST00000491881 BLVRBP30043 206 aaPredicted RBP1.55□□□□□ -2.16
VTA1-204ENST00000491881 PPP1CCP36873 323 aaKnown RBP1.55□□□□□ -2.16
VTA1-204ENST00000491881 SPAM1P38567 509 aa1.55□□□□□ -2.16
VTA1-204ENST00000491881 HADHBP55084 474 aaKnown RBP1.55□□□□□ -2.16
VTA1-204ENST00000491881 GTF2BQ00403 316 aa1.55□□□□□ -2.16
VTA1-204ENST00000491881 BSPH1Q075Z2 132 aa1.55□□□□□ -2.16
VTA1-204ENST00000491881 HTR4Q13639 388 aa1.55□□□□□ -2.16
VTA1-204ENST00000491881 PDK2Q15119 407 aa1.55□□□□□ -2.16
VTA1-204ENST00000491881 SYCP1Q15431 976 aa1.55□□□□□ -2.16
VTA1-204ENST00000491881 RBM48Q5RL73 367 aaKnown RBP1.55□□□□□ -2.16
VTA1-204ENST00000491881 CCDC121Q6ZUS5 278 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms