RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 IDNKQ5T6J7 187 aa24.29■■□□□ 1.48
LDB1-204ENST00000490751 SCOCQ9UIL1 159 aa24.29■■□□□ 1.48
LDB1-204ENST00000490751 SSX5O60225 188 aa24.28■■□□□ 1.48
LDB1-204ENST00000490751 CNIH1O95406 144 aa24.28■■□□□ 1.48
LDB1-204ENST00000490751 NFYAP23511 347 aaPredicted RBP24.28■■□□□ 1.48
LDB1-204ENST00000490751 CD40LGP29965 261 aa24.28■■□□□ 1.48
LDB1-204ENST00000490751 SCAND1P57086 179 aa24.28■■□□□ 1.48
LDB1-204ENST00000490751 TPPP2P59282 170 aa24.28■■□□□ 1.48
LDB1-204ENST00000490751 DDB2Q92466 427 aa24.28■■□□□ 1.48
LDB1-204ENST00000490751 SLC25A38Q96DW6 304 aa24.28■■□□□ 1.48
LDB1-204ENST00000490751 ETV7Q9Y603 341 aa24.28■■□□□ 1.48
LDB1-204ENST00000490751 SRRM4A7MD48 611 aaKnown RBP24.27■■□□□ 1.48
LDB1-204ENST00000490751 LINC00473A8K010 186 aa24.27■■□□□ 1.48
LDB1-204ENST00000490751 DCUN1D4Q92564 292 aa24.27■■□□□ 1.48
LDB1-204ENST00000490751 SLA2Q9H6Q3 261 aa24.27■■□□□ 1.48
LDB1-204ENST00000490751 OR2W1Q9Y3N9 320 aa24.27■■□□□ 1.48
LDB1-204ENST00000490751 IGHV3-11P01762 117 aa24.26■■□□□ 1.47
LDB1-204ENST00000490751 ECI1P42126 302 aa24.26■■□□□ 1.47
LDB1-204ENST00000490751 CNIH2Q6PI25 160 aa24.26■■□□□ 1.47
LDB1-204ENST00000490751 ZNF645Q8N7E2 425 aa24.26■■□□□ 1.47
LDB1-204ENST00000490751 DNAH9Q9NYC9 4486 aa24.25■■□□□ 1.47
LDB1-204ENST00000490751 IGHV4OR15-8A0A075B7B6 117 aa24.25■■□□□ 1.47
LDB1-204ENST00000490751 A0A087WW49 117 aa24.25■■□□□ 1.47
LDB1-204ENST00000490751 LINC01619G3V211 115 aa24.25■■□□□ 1.47
LDB1-204ENST00000490751 CRYZL1O95825 349 aa24.25■■□□□ 1.47
LDB1-204ENST00000490751 SLURP1P55000 103 aa24.25■■□□□ 1.47
LDB1-204ENST00000490751 DCTN2Q13561 401 aaKnown RBP24.25■■□□□ 1.47
LDB1-204ENST00000490751 PRR25Q96S07 402 aa24.25■■□□□ 1.47
LDB1-204ENST00000490751 ANXA10Q9UJ72 324 aa24.25■■□□□ 1.47
LDB1-204ENST00000490751 TRAV18A0A075B6X5 111 aa24.24■■□□□ 1.47
LDB1-204ENST00000490751 OVOL1O14753 267 aa24.24■■□□□ 1.47
LDB1-204ENST00000490751 TRGV3P03979 118 aa24.24■■□□□ 1.47
LDB1-204ENST00000490751 POC5Q8NA72 575 aa24.24■■□□□ 1.47
LDB1-204ENST00000490751 ZNF355PQ9NSJ1 428 aa24.24■■□□□ 1.47
LDB1-204ENST00000490751 HLA-DQB1P01920 261 aa24.23■■□□□ 1.47
LDB1-204ENST00000490751 VMA21Q3ZAQ7 101 aa24.23■■□□□ 1.47
LDB1-204ENST00000490751 OR5T1Q8NG75 326 aa24.23■■□□□ 1.47
LDB1-204ENST00000490751 DLX4Q92988 240 aaPredicted RBP24.23■■□□□ 1.47
LDB1-204ENST00000490751 RHOVQ96L33 236 aa24.23■■□□□ 1.47
LDB1-204ENST00000490751 IGKV1D-13A0A0B4J2D9 117 aa24.22■■□□□ 1.47
LDB1-204ENST00000490751 IGKV1-13P0DP09 117 aa24.22■■□□□ 1.47
LDB1-204ENST00000490751 INSL3P51460 131 aa24.22■■□□□ 1.47
LDB1-204ENST00000490751 UBE2KP61086 200 aa24.22■■□□□ 1.47
LDB1-204ENST00000490751 CD69Q07108 199 aa24.22■■□□□ 1.47
LDB1-204ENST00000490751 TIMM50Q3ZCQ8 353 aa24.22■■□□□ 1.47
LDB1-204ENST00000490751 B9D2Q9BPU9 175 aa24.22■■□□□ 1.47
LDB1-204ENST00000490751 RBMX2Q9Y388 322 aaKnown RBP24.22■■□□□ 1.47
LDB1-204ENST00000490751 MRGPRG-AS1Q2M3A8 158 aa24.21■■□□□ 1.47
LDB1-204ENST00000490751 KCTD9Q7L273 389 aa24.21■■□□□ 1.47
LDB1-204ENST00000490751 TEX45Q8NA69 505 aa24.21■■□□□ 1.47
LDB1-204ENST00000490751 OSR1Q8TAX0 266 aaPredicted RBP24.21■■□□□ 1.47
LDB1-204ENST00000490751 A0A0A6YYH2 397 aa24.2■■□□□ 1.46
LDB1-204ENST00000490751 A6NJ64 397 aa24.2■■□□□ 1.46
LDB1-204ENST00000490751 H3BUA1 57 aa24.2■■□□□ 1.46
LDB1-204ENST00000490751 TUSC2O75896 110 aa24.2■■□□□ 1.46
LDB1-204ENST00000490751 SLC22A5O76082 557 aa24.2■■□□□ 1.46
LDB1-204ENST00000490751 HSPB1P04792 205 aaKnown RBP24.2■■□□□ 1.46
LDB1-204ENST00000490751 TGFBR1P36897 503 aa24.2■■□□□ 1.46
LDB1-204ENST00000490751 IDO2Q6ZQW0 420 aa24.2■■□□□ 1.46
LDB1-204ENST00000490751 TMEM68Q96MH6 324 aa24.2■■□□□ 1.46
LDB1-204ENST00000490751 SPATA2Q9UM82 520 aa24.2■■□□□ 1.46
LDB1-204ENST00000490751 FCGR3BO75015 233 aa24.19■■□□□ 1.46
LDB1-204ENST00000490751 IGLV2-14P01704 120 aa24.19■■□□□ 1.46
LDB1-204ENST00000490751 C11orf87Q6NUJ2 197 aa24.19■■□□□ 1.46
LDB1-204ENST00000490751 GVQW1Q8N7I0 195 aa24.19■■□□□ 1.46
LDB1-204ENST00000490751 BEST4Q8NFU0 473 aa24.19■■□□□ 1.46
LDB1-204ENST00000490751 ZNF256Q9Y2P7 627 aaPredicted RBP24.19■■□□□ 1.46
LDB1-204ENST00000490751 A0A087WXM4 84 aa24.18■■□□□ 1.46
LDB1-204ENST00000490751 ARPC4P59998 168 aa24.18■■□□□ 1.46
LDB1-204ENST00000490751 RPL30P62888 115 aaKnown RBP24.18■■□□□ 1.46
LDB1-204ENST00000490751 TNXAQ16473 311 aa24.18■■□□□ 1.46
LDB1-204ENST00000490751 PRSS8Q16651 343 aa24.18■■□□□ 1.46
LDB1-204ENST00000490751 OR2B11Q5JQS5 317 aa24.18■■□□□ 1.46
LDB1-204ENST00000490751 ZNF429Q86V71 674 aa24.18■■□□□ 1.46
LDB1-204ENST00000490751 TSPAN14Q8NG11 270 aa24.18■■□□□ 1.46
LDB1-204ENST00000490751 PHB2Q99623 299 aa24.18■■□□□ 1.46
LDB1-204ENST00000490751 DCUN1D5Q9BTE7 237 aa24.18■■□□□ 1.46
LDB1-204ENST00000490751 VCX3AQ9NNX9 186 aa24.18■■□□□ 1.46
LDB1-204ENST00000490751 DIABLOQ9NR28 239 aa24.18■■□□□ 1.46
LDB1-204ENST00000490751 PRELID3BQ9Y3B1 194 aa24.18■■□□□ 1.46
LDB1-204ENST00000490751 AIREO43918 545 aa24.17■■□□□ 1.46
LDB1-204ENST00000490751 TMEM127O75204 238 aa24.17■■□□□ 1.46
LDB1-204ENST00000490751 SAP30O75446 220 aa24.17■■□□□ 1.46
LDB1-204ENST00000490751 YIPF6Q96EC8 236 aa24.17■■□□□ 1.46
LDB1-204ENST00000490751 AUNIPQ9H7T9 357 aa24.17■■□□□ 1.46
LDB1-204ENST00000490751 MRPS7Q9Y2R9 242 aaKnown RBP24.17■■□□□ 1.46
LDB1-204ENST00000490751 LSM4Q9Y4Z0 139 aaKnown RBP24.17■■□□□ 1.46
LDB1-204ENST00000490751 COL7A1Q02388 2944 aa24.16■■□□□ 1.46
LDB1-204ENST00000490751 C13orf42A0A1B0GVH6 325 aa24.16■■□□□ 1.46
LDB1-204ENST00000490751 TNFAIP8O95379 198 aa24.16■■□□□ 1.46
LDB1-204ENST00000490751 SAA1P0DJI8 122 aaPredicted RBP24.16■■□□□ 1.46
LDB1-204ENST00000490751 APELAP0DMC3 54 aa24.16■■□□□ 1.46
LDB1-204ENST00000490751 OVCH2Q7RTZ1 564 aa24.16■■□□□ 1.46
LDB1-204ENST00000490751 HOGA1Q86XE5 327 aa24.16■■□□□ 1.46
LDB1-204ENST00000490751 ACOT12Q8WYK0 555 aa24.16■■□□□ 1.46
LDB1-204ENST00000490751 TNCP24821 2201 aa24.16■■□□□ 1.46
LDB1-204ENST00000490751 MSGN1A6NI15 193 aa24.15■■□□□ 1.46
LDB1-204ENST00000490751 LY86O95711 162 aa24.15■■□□□ 1.46
LDB1-204ENST00000490751 PTHLHP12272 177 aa24.15■■□□□ 1.46
LDB1-204ENST00000490751 LSM3P62310 102 aaKnown RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms