RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 Q6ZS49 121 aa10.85□□□□□ -0.67
VTI1A-206ENST00000489142 OR5T1Q8NG75 326 aa10.85□□□□□ -0.67
VTI1A-206ENST00000489142 DCUN1D4Q92564 292 aa10.85□□□□□ -0.67
VTI1A-206ENST00000489142 ZNF355PQ9NSJ1 428 aa10.85□□□□□ -0.67
VTI1A-206ENST00000489142 IGKV1D-13A0A0B4J2D9 117 aa10.84□□□□□ -0.67
VTI1A-206ENST00000489142 DIRAS3O95661 229 aa10.84□□□□□ -0.67
VTI1A-206ENST00000489142 CRYZL1O95825 349 aa10.84□□□□□ -0.67
VTI1A-206ENST00000489142 CRYGBP07316 175 aa10.84□□□□□ -0.67
VTI1A-206ENST00000489142 LGALS1P09382 135 aaKnown RBP10.84□□□□□ -0.67
VTI1A-206ENST00000489142 IGKV1-13P0DP09 117 aa10.84□□□□□ -0.67
VTI1A-206ENST00000489142 PTHLHP12272 177 aa10.84□□□□□ -0.67
VTI1A-206ENST00000489142 DUTP33316 252 aaKnown RBP10.84□□□□□ -0.67
VTI1A-206ENST00000489142 CBX3Q13185 183 aa10.84□□□□□ -0.67
VTI1A-206ENST00000489142 SRSF7Q16629 238 aaKnown RBP eCLIP10.84□□□□□ -0.67
VTI1A-206ENST00000489142 RTL8BQ17RB0 113 aa10.84□□□□□ -0.67
VTI1A-206ENST00000489142 TCTEX1D1Q8N7M0 179 aa10.84□□□□□ -0.67
VTI1A-206ENST00000489142 DDB2Q92466 427 aa10.84□□□□□ -0.67
VTI1A-206ENST00000489142 DLX4Q92988 240 aaPredicted RBP10.84□□□□□ -0.67
VTI1A-206ENST00000489142 TRAV18A0A075B6X5 111 aa10.83□□□□□ -0.68
VTI1A-206ENST00000489142 TRGV3P03979 118 aa10.83□□□□□ -0.68
VTI1A-206ENST00000489142 TAGLNQ01995 201 aaKnown RBP10.83□□□□□ -0.68
VTI1A-206ENST00000489142 CD69Q07108 199 aa10.83□□□□□ -0.68
VTI1A-206ENST00000489142 ARL6IP1Q15041 203 aa10.83□□□□□ -0.68
VTI1A-206ENST00000489142 MRGPRG-AS1Q2M3A8 158 aa10.83□□□□□ -0.68
VTI1A-206ENST00000489142 AKIRIN2Q53H80 203 aa10.83□□□□□ -0.68
VTI1A-206ENST00000489142 TMEM177Q53S58 311 aa10.83□□□□□ -0.68
VTI1A-206ENST00000489142 GVQW1Q8N7I0 195 aa10.83□□□□□ -0.68
VTI1A-206ENST00000489142 GPHA2Q96T91 129 aa10.83□□□□□ -0.68
VTI1A-206ENST00000489142 LINC01619G3V211 115 aa10.82□□□□□ -0.68
VTI1A-206ENST00000489142 OVOL1O14753 267 aa10.82□□□□□ -0.68
VTI1A-206ENST00000489142 FCGR3BO75015 233 aa10.82□□□□□ -0.68
VTI1A-206ENST00000489142 TUSC2O75896 110 aa10.82□□□□□ -0.68
VTI1A-206ENST00000489142 LSM3P62310 102 aaKnown RBP10.82□□□□□ -0.68
VTI1A-206ENST00000489142 PYHIN1Q6K0P9 492 aa10.82□□□□□ -0.68
VTI1A-206ENST00000489142 ZNF645Q8N7E2 425 aa10.82□□□□□ -0.68
VTI1A-206ENST00000489142 DCSTAMPQ9H295 470 aa10.82□□□□□ -0.68
VTI1A-206ENST00000489142 ANXA10Q9UJ72 324 aa10.82□□□□□ -0.68
VTI1A-206ENST00000489142 OR2W1Q9Y3N9 320 aa10.82□□□□□ -0.68
VTI1A-206ENST00000489142 TNCP24821 2201 aa10.81□□□□□ -0.68
VTI1A-206ENST00000489142 MEIS3P1A6NDR6 274 aa10.81□□□□□ -0.68
VTI1A-206ENST00000489142 RAMP3O60896 148 aa10.81□□□□□ -0.68
VTI1A-206ENST00000489142 SAP30O75446 220 aa10.81□□□□□ -0.68
VTI1A-206ENST00000489142 SCGNO76038 276 aa10.81□□□□□ -0.68
VTI1A-206ENST00000489142 LY86O95711 162 aa10.81□□□□□ -0.68
VTI1A-206ENST00000489142 IGLV2-14P01704 120 aa10.81□□□□□ -0.68
VTI1A-206ENST00000489142 LGALS7P47929 136 aa10.81□□□□□ -0.68
VTI1A-206ENST00000489142 RPL30P62888 115 aaKnown RBP10.81□□□□□ -0.68
VTI1A-206ENST00000489142 PITPNAQ00169 270 aa10.81□□□□□ -0.68
VTI1A-206ENST00000489142 TNXAQ16473 311 aa10.81□□□□□ -0.68
VTI1A-206ENST00000489142 CNIH2Q6PI25 160 aa10.81□□□□□ -0.68
VTI1A-206ENST00000489142 KCTD9Q7L273 389 aa10.81□□□□□ -0.68
VTI1A-206ENST00000489142 POC5Q8NA72 575 aa10.81□□□□□ -0.68
VTI1A-206ENST00000489142 ADTRPQ96IZ2 230 aa10.81□□□□□ -0.68
VTI1A-206ENST00000489142 PHB2Q99623 299 aa10.81□□□□□ -0.68
VTI1A-206ENST00000489142 DCUN1D5Q9BTE7 237 aa10.81□□□□□ -0.68
VTI1A-206ENST00000489142 RBMX2Q9Y388 322 aaKnown RBP10.81□□□□□ -0.68
VTI1A-206ENST00000489142 ETV7Q9Y603 341 aa10.81□□□□□ -0.68
VTI1A-206ENST00000489142 ANKRD34BA5PLL1 514 aa10.8□□□□□ -0.68
VTI1A-206ENST00000489142 HLA-DQB1P01920 261 aa10.8□□□□□ -0.68
VTI1A-206ENST00000489142 SAA1P0DJI8 122 aaPredicted RBP10.8□□□□□ -0.68
VTI1A-206ENST00000489142 RRASP10301 218 aa10.8□□□□□ -0.68
VTI1A-206ENST00000489142 CD40LGP29965 261 aa10.8□□□□□ -0.68
VTI1A-206ENST00000489142 ARPC4P59998 168 aa10.8□□□□□ -0.68
VTI1A-206ENST00000489142 VMA21Q3ZAQ7 101 aa10.8□□□□□ -0.68
VTI1A-206ENST00000489142 C10orf55Q5SWW7 151 aa10.8□□□□□ -0.68
VTI1A-206ENST00000489142 HAPLN4Q86UW8 402 aa10.8□□□□□ -0.68
VTI1A-206ENST00000489142 VKORC1L1Q8N0U8 176 aa10.8□□□□□ -0.68
VTI1A-206ENST00000489142 TSPAN14Q8NG11 270 aa10.8□□□□□ -0.68
VTI1A-206ENST00000489142 ACOT12Q8WYK0 555 aa10.8□□□□□ -0.68
VTI1A-206ENST00000489142 YIPF6Q96EC8 236 aa10.8□□□□□ -0.68
VTI1A-206ENST00000489142 RHOVQ96L33 236 aa10.8□□□□□ -0.68
VTI1A-206ENST00000489142 B9D2Q9BPU9 175 aa10.8□□□□□ -0.68
VTI1A-206ENST00000489142 COA4Q9NYJ1 87 aa10.8□□□□□ -0.68
VTI1A-206ENST00000489142 TAS2R8Q9NYW2 309 aa10.8□□□□□ -0.68
VTI1A-206ENST00000489142 SPATA2Q9UM82 520 aa10.8□□□□□ -0.68
VTI1A-206ENST00000489142 C13orf42A0A1B0GVH6 325 aa10.79□□□□□ -0.68
VTI1A-206ENST00000489142 MSGN1A6NI15 193 aa10.79□□□□□ -0.68
VTI1A-206ENST00000489142 TNFSF12O43508 249 aa10.79□□□□□ -0.68
VTI1A-206ENST00000489142 AIREO43918 545 aa10.79□□□□□ -0.68
VTI1A-206ENST00000489142 RBMXL2O75526 392 aaKnown RBP10.79□□□□□ -0.68
VTI1A-206ENST00000489142 HSPB1P04792 205 aaKnown RBP10.79□□□□□ -0.68
VTI1A-206ENST00000489142 CTXN2P0C2S0 81 aa10.79□□□□□ -0.68
VTI1A-206ENST00000489142 AADACP22760 399 aa10.79□□□□□ -0.68
VTI1A-206ENST00000489142 UBE2KP61086 200 aa10.79□□□□□ -0.68
VTI1A-206ENST00000489142 PRSS8Q16651 343 aa10.79□□□□□ -0.68
VTI1A-206ENST00000489142 TEX45Q8NA69 505 aa10.79□□□□□ -0.68
VTI1A-206ENST00000489142 BEST4Q8NFU0 473 aa10.79□□□□□ -0.68
VTI1A-206ENST00000489142 TCTEX1D2Q8WW35 142 aa10.79□□□□□ -0.68
VTI1A-206ENST00000489142 SLA2Q9H6Q3 261 aa10.79□□□□□ -0.68
VTI1A-206ENST00000489142 AUNIPQ9H7T9 357 aa10.79□□□□□ -0.68
VTI1A-206ENST00000489142 ZNF430Q9H8G1 570 aaPredicted RBP10.79□□□□□ -0.68
VTI1A-206ENST00000489142 ZMAT5Q9UDW3 170 aaKnown RBP10.79□□□□□ -0.68
VTI1A-206ENST00000489142 ZNF256Q9Y2P7 627 aaPredicted RBP10.79□□□□□ -0.68
VTI1A-206ENST00000489142 LSM4Q9Y4Z0 139 aaKnown RBP10.79□□□□□ -0.68
VTI1A-206ENST00000489142 MPPED1O15442 326 aa10.78□□□□□ -0.68
VTI1A-206ENST00000489142 PRH1P02810 166 aa10.78□□□□□ -0.68
VTI1A-206ENST00000489142 FCGR2CP31995 323 aa10.78□□□□□ -0.68
VTI1A-206ENST00000489142 RPS19P39019 145 aaKnown RBP10.78□□□□□ -0.68
VTI1A-206ENST00000489142 SCAND1P57086 179 aa10.78□□□□□ -0.68
VTI1A-206ENST00000489142 VAX1Q5SQQ9 334 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms